EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000013890 (Gene tree)
Gene ID: 110193085
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 19506 bases
Position: chrFUWB01002299.1:52062-71567
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000018154	MMR_HSR1	PF01926.23	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000022428	LSG1-201	2403	-	ENSPCIP00000018154	800 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000013890's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000013890's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000013890	LSG1	82	67.188	ENSG00000041802	LSG1	89	78.667	Homo_sapiens
ENSPCIG00000013890	LSG1	82	66.839	ENSAPOG00000009694	lsg1	99	66.839	Acanthochromis_polyacanthus
ENSPCIG00000013890	LSG1	83	63.547	ENSAMEG00000009343	LSG1	100	63.547	Ailuropoda_melanoleuca
ENSPCIG00000013890	LSG1	79	67.742	ENSACIG00000012406	lsg1	98	67.742	Amphilophus_citrinellus
ENSPCIG00000013890	LSG1	82	65.285	ENSAOCG00000016066	lsg1	99	65.285	Amphiprion_ocellaris
ENSPCIG00000013890	LSG1	82	65.285	ENSAPEG00000003252	lsg1	99	65.285	Amphiprion_percula
ENSPCIG00000013890	LSG1	80	66.316	ENSATEG00000011794	lsg1	98	66.316	Anabas_testudineus
ENSPCIG00000013890	LSG1	78	63.844	ENSACAG00000004222	LSG1	100	63.554	Anolis_carolinensis
ENSPCIG00000013890	LSG1	82	67.708	ENSANAG00000021153	LSG1	99	67.708	Aotus_nancymaae
ENSPCIG00000013890	LSG1	81	66.667	ENSACLG00000000520	lsg1	98	66.667	Astatotilapia_calliptera
ENSPCIG00000013890	LSG1	81	66.486	ENSAMXG00000008271	lsg1	98	66.848	Astyanax_mexicanus
ENSPCIG00000013890	LSG1	82	67.188	ENSBTAG00000008461	LSG1	99	67.188	Bos_taurus
ENSPCIG00000013890	LSG1	82	66.667	ENSCJAG00000013962	LSG1	99	66.667	Callithrix_jacchus
ENSPCIG00000013890	LSG1	78	64.249	ENSCAFG00000013445	LSG1	100	64.249	Canis_familiaris
ENSPCIG00000013890	LSG1	82	66.492	ENSCAFG00020002216	LSG1	100	66.492	Canis_lupus_dingo
ENSPCIG00000013890	LSG1	82	67.358	ENSCHIG00000015769	LSG1	100	67.358	Capra_hircus
ENSPCIG00000013890	LSG1	82	66.842	ENSTSYG00000001447	LSG1	99	66.842	Carlito_syrichta
ENSPCIG00000013890	LSG1	77	64.598	ENSCAPG00000009856	LSG1	99	65.057	Cavia_aperea
ENSPCIG00000013890	LSG1	83	66.316	ENSCCAG00000035744	LSG1	99	66.316	Cebus_capucinus
ENSPCIG00000013890	LSG1	82	67.708	ENSCATG00000042060	LSG1	99	67.708	Cercocebus_atys
ENSPCIG00000013890	LSG1	82	67.188	ENSCSAG00000008796	LSG1	92	67.188	Chlorocebus_sabaeus
ENSPCIG00000013890	LSG1	84	66.842	ENSCPBG00000015941	LSG1	86	66.842	Chrysemys_picta_bellii
ENSPCIG00000013890	LSG1	57	58.929	ENSCING00000007079	-	91	58.929	Ciona_intestinalis
ENSPCIG00000013890	LSG1	68	57.317	ENSCSAVG00000002514	-	84	59.821	Ciona_savignyi
ENSPCIG00000013890	LSG1	82	67.188	ENSCANG00000030709	LSG1	99	67.188	Colobus_angolensis_palliatus
ENSPCIG00000013890	LSG1	83	67.368	ENSCGRG00001019846	Lsg1	99	67.708	Cricetulus_griseus_chok1gshd
ENSPCIG00000013890	LSG1	82	67.708	ENSCGRG00000014617	Lsg1	99	67.708	Cricetulus_griseus_crigri
ENSPCIG00000013890	LSG1	79	65.405	ENSCSEG00000008522	lsg1	97	65.405	Cynoglossus_semilaevis
ENSPCIG00000013890	LSG1	80	64.398	ENSCVAG00000002484	lsg1	98	64.398	Cyprinodon_variegatus
ENSPCIG00000013890	LSG1	82	62.376	ENSDARG00000015352	lsg1	100	62.553	Danio_rerio
ENSPCIG00000013890	LSG1	82	67.188	ENSDNOG00000006224	LSG1	99	67.188	Dasypus_novemcinctus
ENSPCIG00000013890	LSG1	82	48.614	FBgn0266284	Ns3	88	58.403	Drosophila_melanogaster
ENSPCIG00000013890	LSG1	72	63.190	ENSETEG00000003888	LSG1	89	64.072	Echinops_telfairi
ENSPCIG00000013890	LSG1	72	55.528	ENSEBUG00000003119	lsg1	85	55.941	Eptatretus_burgeri
ENSPCIG00000013890	LSG1	82	67.708	ENSEASG00005000678	LSG1	99	67.708	Equus_asinus_asinus
ENSPCIG00000013890	LSG1	82	67.708	ENSECAG00000017659	LSG1	99	67.708	Equus_caballus
ENSPCIG00000013890	LSG1	70	59.664	ENSEEUG00000015217	LSG1	87	59.664	Erinaceus_europaeus
ENSPCIG00000013890	LSG1	81	63.684	ENSELUG00000023973	lsg1	100	63.684	Esox_lucius
ENSPCIG00000013890	LSG1	82	65.803	ENSFCAG00000024957	LSG1	100	65.803	Felis_catus
ENSPCIG00000013890	LSG1	75	67.725	ENSFALG00000007210	LSG1	94	67.725	Ficedula_albicollis
ENSPCIG00000013890	LSG1	82	67.188	ENSFDAG00000017373	LSG1	99	67.188	Fukomys_damarensis
ENSPCIG00000013890	LSG1	79	64.362	ENSFHEG00000003680	lsg1	100	64.021	Fundulus_heteroclitus
ENSPCIG00000013890	LSG1	79	65.241	ENSGMOG00000015834	lsg1	88	75.207	Gadus_morhua
ENSPCIG00000013890	LSG1	82	65.445	ENSGALG00000007058	LSG1	87	65.445	Gallus_gallus
ENSPCIG00000013890	LSG1	79	63.298	ENSGAFG00000015831	lsg1	98	63.298	Gambusia_affinis
ENSPCIG00000013890	LSG1	79	64.398	ENSGACG00000009323	lsg1	98	64.398	Gasterosteus_aculeatus
ENSPCIG00000013890	LSG1	82	67.358	ENSGGOG00000000520	LSG1	99	67.539	Gorilla_gorilla
ENSPCIG00000013890	LSG1	81	66.667	ENSHBUG00000005659	lsg1	98	66.667	Haplochromis_burtoni
ENSPCIG00000013890	LSG1	84	63.861	ENSHGLG00000017390	LSG1	99	63.861	Heterocephalus_glaber_female
ENSPCIG00000013890	LSG1	84	63.861	ENSHGLG00100018587	LSG1	99	63.861	Heterocephalus_glaber_male
ENSPCIG00000013890	LSG1	79	65.426	ENSHCOG00000016848	lsg1	98	65.426	Hippocampus_comes
ENSPCIG00000013890	LSG1	82	65.128	ENSIPUG00000008631	lsg1	100	65.128	Ictalurus_punctatus
ENSPCIG00000013890	LSG1	61	67.368	ENSSTOG00000010234	LSG1	92	67.368	Ictidomys_tridecemlineatus
ENSPCIG00000013890	LSG1	82	66.667	ENSJJAG00000015513	Lsg1	98	66.667	Jaculus_jaculus
ENSPCIG00000013890	LSG1	78	66.102	ENSKMAG00000009681	lsg1	97	66.102	Kryptolebias_marmoratus
ENSPCIG00000013890	LSG1	80	66.842	ENSLBEG00000024261	lsg1	98	66.842	Labrus_bergylta
ENSPCIG00000013890	LSG1	82	67.016	ENSLACG00000013399	LSG1	100	67.016	Latimeria_chalumnae
ENSPCIG00000013890	LSG1	80	64.398	ENSLOCG00000004918	lsg1	100	64.103	Lepisosteus_oculatus
ENSPCIG00000013890	LSG1	81	66.845	ENSLAFG00000012919	-	99	66.845	Loxodonta_africana
ENSPCIG00000013890	LSG1	82	67.188	ENSMFAG00000039903	LSG1	99	67.188	Macaca_fascicularis
ENSPCIG00000013890	LSG1	82	67.188	ENSMMUG00000010708	LSG1	99	67.188	Macaca_mulatta
ENSPCIG00000013890	LSG1	82	67.708	ENSMNEG00000031538	LSG1	99	67.708	Macaca_nemestrina
ENSPCIG00000013890	LSG1	82	67.708	ENSMLEG00000041184	LSG1	99	67.708	Mandrillus_leucophaeus
ENSPCIG00000013890	LSG1	81	63.402	ENSMAMG00000000470	lsg1	100	63.402	Mastacembelus_armatus
ENSPCIG00000013890	LSG1	81	66.667	ENSMZEG00005017865	lsg1	98	66.667	Maylandia_zebra
ENSPCIG00000013890	LSG1	72	65.969	ENSMGAG00000007050	LSG1	99	65.969	Meleagris_gallopavo
ENSPCIG00000013890	LSG1	76	68.182	ENSMAUG00000016976	Lsg1	93	68.182	Mesocricetus_auratus
ENSPCIG00000013890	LSG1	82	66.667	ENSMICG00000049087	LSG1	99	66.667	Microcebus_murinus
ENSPCIG00000013890	LSG1	81	68.947	ENSMOCG00000022136	Lsg1	99	68.947	Microtus_ochrogaster
ENSPCIG00000013890	LSG1	68	81.897	ENSMMOG00000008884	lsg1	98	65.263	Mola_mola
ENSPCIG00000013890	LSG1	79	78.680	ENSMODG00000019828	LSG1	97	78.680	Monodelphis_domestica
ENSPCIG00000013890	LSG1	82	67.358	MGP_CAROLIEiJ_G0020648	Lsg1	100	67.358	Mus_caroli
ENSPCIG00000013890	LSG1	82	67.876	ENSMUSG00000022538	Lsg1	100	67.876	Mus_musculus
ENSPCIG00000013890	LSG1	80	67.358	MGP_PahariEiJ_G0016352	Lsg1	100	67.358	Mus_pahari
ENSPCIG00000013890	LSG1	82	68.394	MGP_SPRETEiJ_G0021544	Lsg1	100	68.394	Mus_spretus
ENSPCIG00000013890	LSG1	82	65.285	ENSMPUG00000003734	LSG1	100	65.285	Mustela_putorius_furo
ENSPCIG00000013890	LSG1	83	66.502	ENSMLUG00000012548	LSG1	100	66.502	Myotis_lucifugus
ENSPCIG00000013890	LSG1	83	66.842	ENSNGAG00000021872	Lsg1	99	66.842	Nannospalax_galili
ENSPCIG00000013890	LSG1	82	68.394	ENSNLEG00000008293	LSG1	99	68.394	Nomascus_leucogenys
ENSPCIG00000013890	LSG1	57	88.660	ENSMEUG00000009041	-	85	88.660	Notamacropus_eugenii
ENSPCIG00000013890	LSG1	82	64.062	ENSONIG00000002635	lsg1	98	64.062	Oreochromis_niloticus
ENSPCIG00000013890	LSG1	86	59.943	ENSOANG00000012742	LSG1	99	59.770	Ornithorhynchus_anatinus
ENSPCIG00000013890	LSG1	82	68.229	ENSOCUG00000004817	LSG1	99	68.229	Oryctolagus_cuniculus
ENSPCIG00000013890	LSG1	78	65.027	ENSORLG00000007695	lsg1	98	65.027	Oryzias_latipes
ENSPCIG00000013890	LSG1	78	65.405	ENSORLG00020016286	lsg1	100	65.405	Oryzias_latipes_hni
ENSPCIG00000013890	LSG1	78	65.405	ENSORLG00015012025	lsg1	98	65.405	Oryzias_latipes_hsok
ENSPCIG00000013890	LSG1	82	60.622	ENSOMEG00000022379	lsg1	98	60.622	Oryzias_melastigma
ENSPCIG00000013890	LSG1	81	69.519	ENSOGAG00000003475	LSG1	99	69.519	Otolemur_garnettii
ENSPCIG00000013890	LSG1	83	67.304	ENSOARG00000020403	LSG1	100	65.745	Ovis_aries
ENSPCIG00000013890	LSG1	82	67.016	ENSPPAG00000029271	LSG1	99	67.016	Pan_paniscus
ENSPCIG00000013890	LSG1	82	67.016	ENSPPRG00000010281	LSG1	100	67.016	Panthera_pardus
ENSPCIG00000013890	LSG1	82	66.321	ENSPTIG00000010789	LSG1	100	66.321	Panthera_tigris_altaica
ENSPCIG00000013890	LSG1	82	66.492	ENSPTRG00000015760	LSG1	99	66.492	Pan_troglodytes
ENSPCIG00000013890	LSG1	82	67.708	ENSPANG00000018249	LSG1	99	67.708	Papio_anubis
ENSPCIG00000013890	LSG1	82	64.615	ENSPKIG00000002895	lsg1	99	64.615	Paramormyrops_kingsleyae
ENSPCIG00000013890	LSG1	78	65.179	ENSPSIG00000009821	LSG1	99	65.179	Pelodiscus_sinensis
ENSPCIG00000013890	LSG1	86	52.754	ENSPMGG00000000931	lsg1	100	52.395	Periophthalmus_magnuspinnatus
ENSPCIG00000013890	LSG1	81	67.914	ENSPEMG00000012082	-	99	67.914	Peromyscus_maniculatus_bairdii
ENSPCIG00000013890	LSG1	81	59.788	ENSPMAG00000007451	lsg1	98	59.278	Petromyzon_marinus
ENSPCIG00000013890	LSG1	80	64.211	ENSPFOG00000021882	lsg1	98	63.874	Poecilia_formosa
ENSPCIG00000013890	LSG1	79	63.830	ENSPLAG00000019536	lsg1	98	63.492	Poecilia_latipinna
ENSPCIG00000013890	LSG1	80	63.542	ENSPMEG00000017281	lsg1	98	63.212	Poecilia_mexicana
ENSPCIG00000013890	LSG1	72	60.256	ENSPREG00000006048	lsg1	97	60.256	Poecilia_reticulata
ENSPCIG00000013890	LSG1	76	64.789	ENSPPYG00000014425	LSG1	100	64.789	Pongo_abelii
ENSPCIG00000013890	LSG1	67	59.697	ENSPCAG00000005511	LSG1	83	59.091	Procavia_capensis
ENSPCIG00000013890	LSG1	81	68.421	ENSPCOG00000012360	LSG1	99	68.421	Propithecus_coquereli
ENSPCIG00000013890	LSG1	81	66.129	ENSPNYG00000021994	lsg1	98	66.129	Pundamilia_nyererei
ENSPCIG00000013890	LSG1	80	67.213	ENSPNAG00000015533	lsg1	99	67.213	Pygocentrus_nattereri
ENSPCIG00000013890	LSG1	82	67.876	ENSRNOG00000001727	Lsg1	100	67.876	Rattus_norvegicus
ENSPCIG00000013890	LSG1	82	67.188	ENSRBIG00000029053	LSG1	99	67.188	Rhinopithecus_bieti
ENSPCIG00000013890	LSG1	82	67.188	ENSRROG00000037702	LSG1	99	67.188	Rhinopithecus_roxellana
ENSPCIG00000013890	LSG1	56	60.674	YGL099W	LSG1	60	60.674	Saccharomyces_cerevisiae
ENSPCIG00000013890	LSG1	82	66.839	ENSSBOG00000034938	LSG1	99	66.839	Saimiri_boliviensis_boliviensis
ENSPCIG00000013890	LSG1	64	83.598	ENSSHAG00000003487	LSG1	100	83.598	Sarcophilus_harrisii
ENSPCIG00000013890	LSG1	80	65.625	ENSSFOG00015008955	lsg1	100	65.625	Scleropages_formosus
ENSPCIG00000013890	LSG1	80	65.789	ENSSDUG00000004622	lsg1	98	65.789	Seriola_dumerili
ENSPCIG00000013890	LSG1	80	65.263	ENSSLDG00000010869	lsg1	98	65.263	Seriola_lalandi_dorsalis
ENSPCIG00000013890	LSG1	67	67.500	ENSSARG00000012981	LSG1	84	65.169	Sorex_araneus
ENSPCIG00000013890	LSG1	82	65.803	ENSSPUG00000016347	LSG1	100	65.803	Sphenodon_punctatus
ENSPCIG00000013890	LSG1	81	63.874	ENSSPAG00000005508	lsg1	99	64.433	Stegastes_partitus
ENSPCIG00000013890	LSG1	82	65.539	ENSSSCG00000011827	LSG1	100	65.285	Sus_scrofa
ENSPCIG00000013890	LSG1	72	67.027	ENSTGUG00000009068	LSG1	99	67.027	Taeniopygia_guttata
ENSPCIG00000013890	LSG1	75	67.081	ENSTRUG00000017380	lsg1	98	67.081	Takifugu_rubripes
ENSPCIG00000013890	LSG1	80	67.895	ENSTNIG00000015570	lsg1	98	67.895	Tetraodon_nigroviridis
ENSPCIG00000013890	LSG1	75	83.562	ENSTTRG00000000559	LSG1	91	83.562	Tursiops_truncatus
ENSPCIG00000013890	LSG1	82	64.767	ENSUAMG00000012454	LSG1	100	64.767	Ursus_americanus
ENSPCIG00000013890	LSG1	82	64.767	ENSUMAG00000000855	LSG1	100	64.767	Ursus_maritimus
ENSPCIG00000013890	LSG1	78	66.839	ENSVPAG00000012400	LSG1	100	66.839	Vicugna_pacos
ENSPCIG00000013890	LSG1	78	64.398	ENSVVUG00000008956	LSG1	97	64.398	Vulpes_vulpes
ENSPCIG00000013890	LSG1	81	66.129	ENSXETG00000003451	lsg1	98	66.667	Xenopus_tropicalis
ENSPCIG00000013890	LSG1	79	62.567	ENSXCOG00000003239	lsg1	98	62.234	Xiphophorus_couchianus
ENSPCIG00000013890	LSG1	79	62.434	ENSXMAG00000005536	lsg1	98	62.105	Xiphophorus_maculatus