EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000014233 (Gene tree)
Gene ID: -
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 141370 bases
Position: chrFUWB01001169.1:703041-844410
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000018617	ResIII	PF04851.15	4.9e-12	1	1
ENSPCIP00000018608	ResIII	PF04851.15	5.4e-12	1	1
ENSPCIP00000018612	ResIII	PF04851.15	5.5e-12	1	1
ENSPCIP00000018608	DEAD	PF00270.29	1.2e-25	1	1
ENSPCIP00000018617	DEAD	PF00270.29	1.2e-25	1	1
ENSPCIP00000018612	DEAD	PF00270.29	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000022983	HFM1-202	4976	-	ENSPCIP00000018612	1491 (aa)	-	-
ENSPCIT00000022988	HFM1-203	4928	-	ENSPCIP00000018617	1475 (aa)	-	-
ENSPCIT00000022979	HFM1-201	5423	-	ENSPCIP00000018608	1474 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000014233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000014233's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000014233	HFM1	56	32.035	ENSPCIG00000023050	SNRNP200	74	32.035

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000014233	HFM1	100	66.979	ENSG00000162669	HFM1	100	66.979	Homo_sapiens
ENSPCIG00000014233	HFM1	57	65.990	ENSAPOG00000005304	hfm1	94	65.990	Acanthochromis_polyacanthus
ENSPCIG00000014233	HFM1	100	67.404	ENSAMEG00000000432	HFM1	100	67.404	Ailuropoda_melanoleuca
ENSPCIG00000014233	HFM1	64	62.971	ENSACIG00000021553	hfm1	85	62.971	Amphilophus_citrinellus
ENSPCIG00000014233	HFM1	57	66.388	ENSAOCG00000022839	hfm1	96	68.679	Amphiprion_ocellaris
ENSPCIG00000014233	HFM1	57	66.029	ENSAPEG00000014316	hfm1	96	68.600	Amphiprion_percula
ENSPCIG00000014233	HFM1	82	53.676	ENSATEG00000019181	hfm1	99	53.676	Anabas_testudineus
ENSPCIG00000014233	HFM1	100	57.447	ENSAPLG00000013639	HFM1	100	57.447	Anas_platyrhynchos
ENSPCIG00000014233	HFM1	100	65.413	ENSANAG00000029513	HFM1	100	65.413	Aotus_nancymaae
ENSPCIG00000014233	HFM1	63	63.394	ENSACLG00000009033	hfm1	96	65.191	Astatotilapia_calliptera
ENSPCIG00000014233	HFM1	65	65.468	ENSAMXG00000006108	hfm1	84	55.786	Astyanax_mexicanus
ENSPCIG00000014233	HFM1	100	67.248	ENSBTAG00000020856	HFM1	100	67.248	Bos_taurus
ENSPCIG00000014233	HFM1	100	66.511	ENSCJAG00000001843	HFM1	100	66.511	Callithrix_jacchus
ENSPCIG00000014233	HFM1	99	68.188	ENSCAFG00000020187	HFM1	99	68.188	Canis_familiaris
ENSPCIG00000014233	HFM1	100	67.584	ENSTSYG00000014250	HFM1	100	67.584	Carlito_syrichta
ENSPCIG00000014233	HFM1	99	63.098	ENSCPOG00000007421	HFM1	99	63.098	Cavia_porcellus
ENSPCIG00000014233	HFM1	100	66.510	ENSCCAG00000033206	HFM1	100	66.510	Cebus_capucinus
ENSPCIG00000014233	HFM1	100	67.046	ENSCATG00000030987	HFM1	100	67.046	Cercocebus_atys
ENSPCIG00000014233	HFM1	100	66.577	ENSCLAG00000005173	HFM1	99	66.577	Chinchilla_lanigera
ENSPCIG00000014233	HFM1	60	86.842	ENSCHOG00000011824	-	71	86.842	Choloepus_hoffmanni
ENSPCIG00000014233	HFM1	100	60.576	ENSCGRG00001016995	Hfm1	100	60.576	Cricetulus_griseus_chok1gshd
ENSPCIG00000014233	HFM1	100	63.831	ENSCGRG00000017181	Hfm1	100	63.831	Cricetulus_griseus_crigri
ENSPCIG00000014233	HFM1	63	62.357	ENSCSEG00000017659	hfm1	87	62.657	Cynoglossus_semilaevis
ENSPCIG00000014233	HFM1	58	66.822	ENSDARG00000104288	hfm1	77	66.822	Danio_rerio
ENSPCIG00000014233	HFM1	100	66.332	ENSDNOG00000004776	HFM1	100	66.332	Dasypus_novemcinctus
ENSPCIG00000014233	HFM1	100	62.135	ENSDORG00000014661	Hfm1	100	62.135	Dipodomys_ordii
ENSPCIG00000014233	HFM1	72	75.000	ENSEASG00005015424	HFM1	98	75.000	Equus_asinus_asinus
ENSPCIG00000014233	HFM1	100	69.349	ENSECAG00000024039	HFM1	100	69.349	Equus_caballus
ENSPCIG00000014233	HFM1	61	66.995	ENSELUG00000018944	hfm1	97	66.995	Esox_lucius
ENSPCIG00000014233	HFM1	100	67.584	ENSFCAG00000029116	HFM1	100	67.584	Felis_catus
ENSPCIG00000014233	HFM1	100	57.818	ENSFALG00000001781	HFM1	100	58.138	Ficedula_albicollis
ENSPCIG00000014233	HFM1	100	66.578	ENSFDAG00000020816	HFM1	100	66.578	Fukomys_damarensis
ENSPCIG00000014233	HFM1	65	60.584	ENSGMOG00000017436	hfm1	100	60.584	Gadus_morhua
ENSPCIG00000014233	HFM1	72	59.176	ENSGAFG00000018093	hfm1	92	67.152	Gambusia_affinis
ENSPCIG00000014233	HFM1	65	60.415	ENSGACG00000015686	hfm1	99	60.415	Gasterosteus_aculeatus
ENSPCIG00000014233	HFM1	100	67.001	ENSGGOG00000038524	HFM1	100	67.001	Gorilla_gorilla
ENSPCIG00000014233	HFM1	63	64.461	ENSHBUG00000007309	hfm1	86	64.461	Haplochromis_burtoni
ENSPCIG00000014233	HFM1	55	63.971	ENSHCOG00000019632	hfm1	97	63.971	Hippocampus_comes
ENSPCIG00000014233	HFM1	63	64.750	ENSIPUG00000017020	hfm1	91	66.906	Ictalurus_punctatus
ENSPCIG00000014233	HFM1	100	62.609	ENSJJAG00000017198	Hfm1	100	62.609	Jaculus_jaculus
ENSPCIG00000014233	HFM1	60	63.546	ENSKMAG00000002282	hfm1	91	63.546	Kryptolebias_marmoratus
ENSPCIG00000014233	HFM1	63	62.607	ENSLBEG00000006759	hfm1	96	64.839	Labrus_bergylta
ENSPCIG00000014233	HFM1	72	66.481	ENSLACG00000010698	HFM1	99	66.574	Latimeria_chalumnae
ENSPCIG00000014233	HFM1	74	60.956	ENSLOCG00000004931	hfm1	98	61.046	Lepisosteus_oculatus
ENSPCIG00000014233	HFM1	50	81.561	ENSLAFG00000015903	-	99	81.561	Loxodonta_africana
ENSPCIG00000014233	HFM1	100	64.800	ENSMFAG00000003649	HFM1	100	64.800	Macaca_fascicularis
ENSPCIG00000014233	HFM1	100	67.247	ENSMMUG00000006819	HFM1	100	67.247	Macaca_mulatta
ENSPCIG00000014233	HFM1	55	67.407	ENSMAMG00000004623	hfm1	97	65.942	Mastacembelus_armatus
ENSPCIG00000014233	HFM1	63	63.394	ENSMZEG00005004679	hfm1	96	65.191	Maylandia_zebra
ENSPCIG00000014233	HFM1	52	77.677	ENSMGAG00000008437	HFM1	96	77.677	Meleagris_gallopavo
ENSPCIG00000014233	HFM1	100	63.807	ENSMAUG00000018858	Hfm1	100	63.807	Mesocricetus_auratus
ENSPCIG00000014233	HFM1	100	65.863	ENSMICG00000037935	HFM1	100	65.863	Microcebus_murinus
ENSPCIG00000014233	HFM1	100	62.575	ENSMOCG00000014812	Hfm1	100	62.575	Microtus_ochrogaster
ENSPCIG00000014233	HFM1	60	63.352	ENSMMOG00000006148	hfm1	93	65.119	Mola_mola
ENSPCIG00000014233	HFM1	63	62.513	ENSMALG00000002401	hfm1	94	65.629	Monopterus_albus
ENSPCIG00000014233	HFM1	95	64.902	MGP_CAROLIEiJ_G0027496	Hfm1	100	64.902	Mus_caroli
ENSPCIG00000014233	HFM1	100	63.758	ENSMUSG00000043410	Hfm1	100	63.758	Mus_musculus
ENSPCIG00000014233	HFM1	100	64.797	MGP_PahariEiJ_G0017268	Hfm1	100	64.797	Mus_pahari
ENSPCIG00000014233	HFM1	100	63.758	MGP_SPRETEiJ_G0028495	Hfm1	100	63.758	Mus_spretus
ENSPCIG00000014233	HFM1	100	68.566	ENSMPUG00000004594	HFM1	100	68.566	Mustela_putorius_furo
ENSPCIG00000014233	HFM1	100	67.157	ENSMLUG00000010200	HFM1	100	67.157	Myotis_lucifugus
ENSPCIG00000014233	HFM1	63	60.493	ENSNBRG00000002910	hfm1	97	65.659	Neolamprologus_brichardi
ENSPCIG00000014233	HFM1	100	63.667	ENSNLEG00000010285	HFM1	100	63.691	Nomascus_leucogenys
ENSPCIG00000014233	HFM1	84	79.284	ENSMEUG00000015788	HFM1	84	79.284	Notamacropus_eugenii
ENSPCIG00000014233	HFM1	83	70.370	ENSOPRG00000013916	HFM1	82	70.370	Ochotona_princeps
ENSPCIG00000014233	HFM1	67	62.326	ENSONIG00000010590	hfm1	95	62.326	Oreochromis_niloticus
ENSPCIG00000014233	HFM1	55	65.521	ENSORLG00000026844	hfm1	99	65.521	Oryzias_latipes
ENSPCIG00000014233	HFM1	65	57.143	ENSORLG00020002951	hfm1	77	56.881	Oryzias_latipes_hni
ENSPCIG00000014233	HFM1	73	58.318	ENSOMEG00000016474	hfm1	75	58.318	Oryzias_melastigma
ENSPCIG00000014233	HFM1	83	73.052	ENSOGAG00000032369	HFM1	99	73.052	Otolemur_garnettii
ENSPCIG00000014233	HFM1	100	66.979	ENSOARG00000015812	HFM1	100	66.979	Ovis_aries
ENSPCIG00000014233	HFM1	93	68.863	ENSPPAG00000024582	HFM1	100	68.863	Pan_paniscus
ENSPCIG00000014233	HFM1	100	67.785	ENSPPRG00000003270	HFM1	100	67.785	Panthera_pardus
ENSPCIG00000014233	HFM1	100	67.517	ENSPTIG00000018881	HFM1	100	67.517	Panthera_tigris_altaica
ENSPCIG00000014233	HFM1	100	67.023	ENSPTRG00000000948	HFM1	100	67.023	Pan_troglodytes
ENSPCIG00000014233	HFM1	100	67.336	ENSPANG00000009838	HFM1	100	67.336	Papio_anubis
ENSPCIG00000014233	HFM1	60	67.865	ENSPKIG00000003810	hfm1	95	69.221	Paramormyrops_kingsleyae
ENSPCIG00000014233	HFM1	56	64.536	ENSPMGG00000011059	hfm1	100	64.536	Periophthalmus_magnuspinnatus
ENSPCIG00000014233	HFM1	100	64.362	ENSPEMG00000022852	Hfm1	100	64.362	Peromyscus_maniculatus_bairdii
ENSPCIG00000014233	HFM1	72	60.517	ENSPFOG00000017194	hfm1	99	60.737	Poecilia_formosa
ENSPCIG00000014233	HFM1	72	60.500	ENSPLAG00000000571	hfm1	92	60.220	Poecilia_latipinna
ENSPCIG00000014233	HFM1	73	60.037	ENSPMEG00000019475	hfm1	93	60.037	Poecilia_mexicana
ENSPCIG00000014233	HFM1	63	65.880	ENSPREG00000007803	hfm1	92	66.990	Poecilia_reticulata
ENSPCIG00000014233	HFM1	100	66.734	ENSPPYG00000001163	HFM1	100	66.734	Pongo_abelii
ENSPCIG00000014233	HFM1	62	72.059	ENSPCAG00000004289	-	64	72.059	Procavia_capensis
ENSPCIG00000014233	HFM1	94	66.773	ENSPVAG00000009713	HFM1	100	64.550	Pteropus_vampyrus
ENSPCIG00000014233	HFM1	63	63.287	ENSPNYG00000001795	hfm1	96	65.191	Pundamilia_nyererei
ENSPCIG00000014233	HFM1	57	67.819	ENSPNAG00000010865	hfm1	83	67.819	Pygocentrus_nattereri
ENSPCIG00000014233	HFM1	100	64.089	ENSRNOG00000023299	Hfm1	100	64.089	Rattus_norvegicus
ENSPCIG00000014233	HFM1	100	66.644	ENSRROG00000045569	HFM1	100	66.711	Rhinopithecus_roxellana
ENSPCIG00000014233	HFM1	94	72.222	ENSSBOG00000027456	HFM1	98	72.222	Saimiri_boliviensis_boliviensis
ENSPCIG00000014233	HFM1	58	84.954	ENSSHAG00000014616	-	99	84.096	Sarcophilus_harrisii
ENSPCIG00000014233	HFM1	83	56.016	ENSSFOG00015020129	hfm1	84	56.016	Scleropages_formosus
ENSPCIG00000014233	HFM1	60	64.922	ENSSMAG00000006907	hfm1	87	64.922	Scophthalmus_maximus
ENSPCIG00000014233	HFM1	56	66.143	ENSSDUG00000011424	hfm1	93	66.143	Seriola_dumerili
ENSPCIG00000014233	HFM1	58	64.802	ENSSLDG00000016386	hfm1	95	64.802	Seriola_lalandi_dorsalis
ENSPCIG00000014233	HFM1	66	58.684	ENSSPAG00000001023	hfm1	95	65.152	Stegastes_partitus
ENSPCIG00000014233	HFM1	100	68.322	ENSSSCG00000006912	HFM1	98	70.898	Sus_scrofa
ENSPCIG00000014233	HFM1	65	75.260	ENSTGUG00000006172	HFM1	100	75.260	Taeniopygia_guttata
ENSPCIG00000014233	HFM1	100	64.943	ENSTTRG00000013933	HFM1	100	64.943	Tursiops_truncatus
ENSPCIG00000014233	HFM1	92	68.119	ENSVPAG00000011331	HFM1	91	68.119	Vicugna_pacos
ENSPCIG00000014233	HFM1	72	73.560	ENSVVUG00000020760	HFM1	99	73.560	Vulpes_vulpes
ENSPCIG00000014233	HFM1	64	67.597	ENSXMAG00000004178	hfm1	100	67.597	Xiphophorus_maculatus