EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000014865 (Gene tree)
Gene ID: -
Gene Symbol: LSM10
Alias: -
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 612 bases
Position: chrFUWB01001993.1:80261-80872
Accession: 17562
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000019445	LSM	PF01423.22	5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000024028	LSM10-201	447	-	ENSPCIP00000019445	136 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000014865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000014865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000014865	LSM10	65	31.522	ENSPCIG00000020320	SNRPD1	78	31.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000014865	LSM10	76	85.437	ENSG00000181817	LSM10	84	85.437	Homo_sapiens
ENSPCIG00000014865	LSM10	76	84.466	ENSAMEG00000019854	LSM10	84	84.466	Ailuropoda_melanoleuca
ENSPCIG00000014865	LSM10	73	71.717	ENSACIG00000015420	oscp1a	66	71.717	Amphilophus_citrinellus
ENSPCIG00000014865	LSM10	72	73.469	ENSAOCG00000015607	LSM10	76	73.469	Amphiprion_ocellaris
ENSPCIG00000014865	LSM10	74	72.277	ENSAOCG00000014654	-	83	72.277	Amphiprion_ocellaris
ENSPCIG00000014865	LSM10	74	72.277	ENSAOCG00000015618	LSM10	83	72.277	Amphiprion_ocellaris
ENSPCIG00000014865	LSM10	74	72.277	ENSAPEG00000021845	-	83	72.277	Amphiprion_percula
ENSPCIG00000014865	LSM10	72	73.469	ENSAPEG00000021851	LSM10	76	73.469	Amphiprion_percula
ENSPCIG00000014865	LSM10	76	66.990	ENSATEG00000006310	oscp1a	76	66.990	Anabas_testudineus
ENSPCIG00000014865	LSM10	82	67.857	ENSACAG00000001231	LSM10	91	67.857	Anolis_carolinensis
ENSPCIG00000014865	LSM10	76	86.408	ENSANAG00000018759	-	84	86.408	Aotus_nancymaae
ENSPCIG00000014865	LSM10	76	85.437	ENSANAG00000031489	-	84	85.437	Aotus_nancymaae
ENSPCIG00000014865	LSM10	74	70.297	ENSACLG00000004728	oscp1a	82	70.297	Astatotilapia_calliptera
ENSPCIG00000014865	LSM10	85	63.866	ENSAMXG00000025301	oscp1a	99	63.866	Astyanax_mexicanus
ENSPCIG00000014865	LSM10	76	85.437	ENSBTAG00000024096	LSM10	84	85.437	Bos_taurus
ENSPCIG00000014865	LSM10	76	85.437	ENSCJAG00000044880	LSM10	84	85.437	Callithrix_jacchus
ENSPCIG00000014865	LSM10	76	86.408	ENSCAFG00000003382	LSM10	84	86.408	Canis_familiaris
ENSPCIG00000014865	LSM10	76	86.408	ENSCAFG00020008920	LSM10	84	86.408	Canis_lupus_dingo
ENSPCIG00000014865	LSM10	76	85.437	ENSCHIG00000009398	LSM10	84	85.437	Capra_hircus
ENSPCIG00000014865	LSM10	76	84.466	ENSCAPG00000012567	LSM10	84	84.466	Cavia_aperea
ENSPCIG00000014865	LSM10	76	84.466	ENSCPOG00000039302	LSM10	84	84.466	Cavia_porcellus
ENSPCIG00000014865	LSM10	76	85.437	ENSCCAG00000008378	-	84	85.437	Cebus_capucinus
ENSPCIG00000014865	LSM10	76	86.408	ENSCCAG00000018913	-	84	86.408	Cebus_capucinus
ENSPCIG00000014865	LSM10	76	84.466	ENSCATG00000006589	LSM10	84	84.466	Cercocebus_atys
ENSPCIG00000014865	LSM10	76	85.437	ENSCLAG00000008633	LSM10	84	85.437	Chinchilla_lanigera
ENSPCIG00000014865	LSM10	76	84.466	ENSCSAG00000000134	LSM10	84	84.466	Chlorocebus_sabaeus
ENSPCIG00000014865	LSM10	88	74.167	ENSCHOG00000008615	LSM10	96	74.167	Choloepus_hoffmanni
ENSPCIG00000014865	LSM10	76	84.466	ENSCANG00000019928	LSM10	84	84.466	Colobus_angolensis_palliatus
ENSPCIG00000014865	LSM10	76	84.466	ENSCGRG00001004317	-	84	84.466	Cricetulus_griseus_chok1gshd
ENSPCIG00000014865	LSM10	71	74.747	ENSCGRG00001022673	-	80	74.747	Cricetulus_griseus_chok1gshd
ENSPCIG00000014865	LSM10	76	84.466	ENSCGRG00000014935	-	84	84.466	Cricetulus_griseus_crigri
ENSPCIG00000014865	LSM10	71	74.747	ENSCGRG00000015514	-	80	74.747	Cricetulus_griseus_crigri
ENSPCIG00000014865	LSM10	74	68.317	ENSCSEG00000010374	oscp1a	68	68.317	Cynoglossus_semilaevis
ENSPCIG00000014865	LSM10	74	70.297	ENSCVAG00000001536	oscp1a	78	70.297	Cyprinodon_variegatus
ENSPCIG00000014865	LSM10	76	73.786	ENSDARG00000101222	oscp1a	86	73.786	Danio_rerio
ENSPCIG00000014865	LSM10	63	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSPCIG00000014865	LSM10	76	87.379	ENSDNOG00000036662	LSM10	84	87.379	Dasypus_novemcinctus
ENSPCIG00000014865	LSM10	76	83.495	ENSDORG00000007579	Lsm10	84	83.495	Dipodomys_ordii
ENSPCIG00000014865	LSM10	70	31.579	FBgn0033554	Lsm10	65	31.579	Drosophila_melanogaster
ENSPCIG00000014865	LSM10	76	85.437	ENSETEG00000005703	LSM10	85	85.437	Echinops_telfairi
ENSPCIG00000014865	LSM10	71	56.701	ENSEBUG00000001312	oscp1a	80	56.701	Eptatretus_burgeri
ENSPCIG00000014865	LSM10	76	85.437	ENSEASG00005012194	LSM10	84	85.437	Equus_asinus_asinus
ENSPCIG00000014865	LSM10	76	86.408	ENSECAG00000005071	LSM10	84	86.408	Equus_caballus
ENSPCIG00000014865	LSM10	76	83.495	ENSEEUG00000012032	LSM10	84	83.495	Erinaceus_europaeus
ENSPCIG00000014865	LSM10	76	75.728	ENSELUG00000007452	oscp1a	84	75.728	Esox_lucius
ENSPCIG00000014865	LSM10	76	80.583	ENSFALG00000000851	LSM10	84	80.583	Ficedula_albicollis
ENSPCIG00000014865	LSM10	82	78.571	ENSFDAG00000021056	LSM10	91	78.571	Fukomys_damarensis
ENSPCIG00000014865	LSM10	70	69.474	ENSFHEG00000001058	oscp1a	82	69.474	Fundulus_heteroclitus
ENSPCIG00000014865	LSM10	75	68.627	ENSGMOG00000019832	oscp1a	86	68.627	Gadus_morhua
ENSPCIG00000014865	LSM10	76	82.524	ENSGALG00000002127	LSM10	84	82.524	Gallus_gallus
ENSPCIG00000014865	LSM10	75	58.095	ENSGAFG00000016445	oscp1a	84	58.095	Gambusia_affinis
ENSPCIG00000014865	LSM10	75	67.647	ENSGACG00000002329	oscp1a	84	67.647	Gasterosteus_aculeatus
ENSPCIG00000014865	LSM10	76	80.583	ENSGAGG00000024848	LSM10	84	80.583	Gopherus_agassizii
ENSPCIG00000014865	LSM10	76	85.437	ENSGGOG00000003556	LSM10	84	85.437	Gorilla_gorilla
ENSPCIG00000014865	LSM10	74	70.297	ENSHBUG00000001722	oscp1a	82	70.297	Haplochromis_burtoni
ENSPCIG00000014865	LSM10	76	83.495	ENSHGLG00000011625	LSM10	84	83.495	Heterocephalus_glaber_female
ENSPCIG00000014865	LSM10	76	83.495	ENSHGLG00100001769	LSM10	84	83.495	Heterocephalus_glaber_male
ENSPCIG00000014865	LSM10	74	69.000	ENSIPUG00000005808	oscp1a	87	69.000	Ictalurus_punctatus
ENSPCIG00000014865	LSM10	76	84.466	ENSSTOG00000000606	LSM10	84	84.466	Ictidomys_tridecemlineatus
ENSPCIG00000014865	LSM10	74	70.297	ENSKMAG00000012143	oscp1a	83	70.297	Kryptolebias_marmoratus
ENSPCIG00000014865	LSM10	76	67.961	ENSLBEG00000017764	oscp1a	84	67.961	Labrus_bergylta
ENSPCIG00000014865	LSM10	76	73.786	ENSLACG00000015904	LSM10	79	73.786	Latimeria_chalumnae
ENSPCIG00000014865	LSM10	76	74.757	ENSLOCG00000018277	oscp1a	84	74.757	Lepisosteus_oculatus
ENSPCIG00000014865	LSM10	76	85.437	ENSLAFG00000009600	LSM10	85	85.437	Loxodonta_africana
ENSPCIG00000014865	LSM10	76	84.466	ENSMFAG00000009115	LSM10	84	84.466	Macaca_fascicularis
ENSPCIG00000014865	LSM10	76	84.466	ENSMMUG00000017338	LSM10	84	84.466	Macaca_mulatta
ENSPCIG00000014865	LSM10	76	84.466	ENSMNEG00000020023	LSM10	84	84.466	Macaca_nemestrina
ENSPCIG00000014865	LSM10	76	84.466	ENSMLEG00000025150	LSM10	84	84.466	Mandrillus_leucophaeus
ENSPCIG00000014865	LSM10	76	69.903	ENSMAMG00000004427	oscp1a	84	69.903	Mastacembelus_armatus
ENSPCIG00000014865	LSM10	74	70.297	ENSMZEG00005026307	oscp1a	82	70.297	Maylandia_zebra
ENSPCIG00000014865	LSM10	76	80.583	ENSMGAG00000015707	LSM10	84	80.583	Meleagris_gallopavo
ENSPCIG00000014865	LSM10	88	76.230	ENSMAUG00000016624	Lsm10	100	76.230	Mesocricetus_auratus
ENSPCIG00000014865	LSM10	76	84.466	ENSMOCG00000021943	Lsm10	84	84.466	Microtus_ochrogaster
ENSPCIG00000014865	LSM10	75	70.588	ENSMMOG00000013597	oscp1a	76	70.588	Mola_mola
ENSPCIG00000014865	LSM10	76	99.029	ENSMODG00000023328	LSM10	84	99.029	Monodelphis_domestica
ENSPCIG00000014865	LSM10	76	83.495	MGP_CAROLIEiJ_G0026467	Lsm10	100	82.796	Mus_caroli
ENSPCIG00000014865	LSM10	76	84.466	ENSMUSG00000050188	Lsm10	100	83.871	Mus_musculus
ENSPCIG00000014865	LSM10	76	84.466	MGP_PahariEiJ_G0028798	Lsm10	100	83.871	Mus_pahari
ENSPCIG00000014865	LSM10	76	84.466	MGP_SPRETEiJ_G0027446	Lsm10	100	83.871	Mus_spretus
ENSPCIG00000014865	LSM10	76	86.408	ENSMPUG00000018593	LSM10	84	86.408	Mustela_putorius_furo
ENSPCIG00000014865	LSM10	76	82.524	ENSMLUG00000023895	LSM10	84	82.524	Myotis_lucifugus
ENSPCIG00000014865	LSM10	76	84.466	ENSNGAG00000015011	Lsm10	84	84.466	Nannospalax_galili
ENSPCIG00000014865	LSM10	75	70.588	ENSNBRG00000014306	oscp1a	83	70.588	Neolamprologus_brichardi
ENSPCIG00000014865	LSM10	76	85.437	ENSNLEG00000033754	LSM10	84	85.437	Nomascus_leucogenys
ENSPCIG00000014865	LSM10	76	99.029	ENSMEUG00000006313	LSM10	84	99.029	Notamacropus_eugenii
ENSPCIG00000014865	LSM10	76	85.437	ENSOPRG00000001699	LSM10	84	85.437	Ochotona_princeps
ENSPCIG00000014865	LSM10	76	85.437	ENSODEG00000019161	LSM10	84	85.437	Octodon_degus
ENSPCIG00000014865	LSM10	76	70.874	ENSONIG00000020904	oscp1a	84	70.874	Oreochromis_niloticus
ENSPCIG00000014865	LSM10	76	82.524	ENSOANG00000002066	LSM10	84	82.524	Ornithorhynchus_anatinus
ENSPCIG00000014865	LSM10	76	84.466	ENSOCUG00000005333	LSM10	84	84.466	Oryctolagus_cuniculus
ENSPCIG00000014865	LSM10	74	71.287	ENSORLG00000009504	oscp1a	83	71.287	Oryzias_latipes
ENSPCIG00000014865	LSM10	74	71.287	ENSORLG00020016201	oscp1a	83	71.287	Oryzias_latipes_hni
ENSPCIG00000014865	LSM10	74	70.297	ENSORLG00015007794	oscp1a	85	70.297	Oryzias_latipes_hsok
ENSPCIG00000014865	LSM10	76	85.437	ENSOGAG00000002653	LSM10	84	85.437	Otolemur_garnettii
ENSPCIG00000014865	LSM10	76	85.437	ENSOARG00000009596	LSM10	84	85.437	Ovis_aries
ENSPCIG00000014865	LSM10	76	85.437	ENSPPAG00000023465	LSM10	84	85.437	Pan_paniscus
ENSPCIG00000014865	LSM10	76	87.379	ENSPPRG00000014619	LSM10	84	87.379	Panthera_pardus
ENSPCIG00000014865	LSM10	76	87.379	ENSPTIG00000004613	LSM10	84	87.379	Panthera_tigris_altaica
ENSPCIG00000014865	LSM10	76	85.437	ENSPTRG00000000539	LSM10	84	85.437	Pan_troglodytes
ENSPCIG00000014865	LSM10	76	84.466	ENSPANG00000023172	LSM10	84	84.466	Papio_anubis
ENSPCIG00000014865	LSM10	76	70.874	ENSPKIG00000003728	oscp1a	83	70.874	Paramormyrops_kingsleyae
ENSPCIG00000014865	LSM10	76	78.641	ENSPSIG00000000590	LSM10	84	78.641	Pelodiscus_sinensis
ENSPCIG00000014865	LSM10	57	67.532	ENSPMGG00000015718	oscp1a	100	67.532	Periophthalmus_magnuspinnatus
ENSPCIG00000014865	LSM10	75	66.667	ENSPFOG00000020490	oscp1a	86	66.667	Poecilia_formosa
ENSPCIG00000014865	LSM10	75	66.667	ENSPLAG00000016537	oscp1a	78	66.667	Poecilia_latipinna
ENSPCIG00000014865	LSM10	69	70.213	ENSPMEG00000000174	oscp1a	82	70.213	Poecilia_mexicana
ENSPCIG00000014865	LSM10	75	65.686	ENSPREG00000009899	oscp1a	78	65.686	Poecilia_reticulata
ENSPCIG00000014865	LSM10	76	85.437	ENSPPYG00000001539	LSM10	84	85.437	Pongo_abelii
ENSPCIG00000014865	LSM10	76	83.495	ENSPCAG00000002520	LSM10	86	83.495	Procavia_capensis
ENSPCIG00000014865	LSM10	76	83.495	ENSPVAG00000008644	LSM10	84	83.495	Pteropus_vampyrus
ENSPCIG00000014865	LSM10	74	70.297	ENSPNYG00000003138	oscp1a	82	70.297	Pundamilia_nyererei
ENSPCIG00000014865	LSM10	78	66.038	ENSPNAG00000028829	oscp1a	88	66.038	Pygocentrus_nattereri
ENSPCIG00000014865	LSM10	76	83.495	ENSRNOG00000025716	Lsm10	84	83.495	Rattus_norvegicus
ENSPCIG00000014865	LSM10	76	84.466	ENSRBIG00000001561	LSM10	84	84.466	Rhinopithecus_bieti
ENSPCIG00000014865	LSM10	76	84.466	ENSRROG00000011414	LSM10	84	84.466	Rhinopithecus_roxellana
ENSPCIG00000014865	LSM10	76	86.408	ENSSBOG00000036413	-	84	86.408	Saimiri_boliviensis_boliviensis
ENSPCIG00000014865	LSM10	76	98.058	ENSSHAG00000018056	LSM10	84	98.058	Sarcophilus_harrisii
ENSPCIG00000014865	LSM10	86	61.983	ENSSFOG00015019954	lsm10	99	61.983	Scleropages_formosus
ENSPCIG00000014865	LSM10	72	69.388	ENSSMAG00000001297	oscp1a	84	69.388	Scophthalmus_maximus
ENSPCIG00000014865	LSM10	76	70.192	ENSSDUG00000007090	oscp1a	85	70.192	Seriola_dumerili
ENSPCIG00000014865	LSM10	73	71.717	ENSSLDG00000000800	oscp1a	82	71.717	Seriola_lalandi_dorsalis
ENSPCIG00000014865	LSM10	76	85.437	ENSSARG00000004211	LSM10	82	85.437	Sorex_araneus
ENSPCIG00000014865	LSM10	73	72.727	ENSSPAG00000009229	oscp1a	82	72.727	Stegastes_partitus
ENSPCIG00000014865	LSM10	76	84.466	ENSSSCG00000038916	LSM10	85	84.466	Sus_scrofa
ENSPCIG00000014865	LSM10	76	81.553	ENSTGUG00000001600	-	84	81.553	Taeniopygia_guttata
ENSPCIG00000014865	LSM10	76	80.583	ENSTGUG00000001602	-	84	80.583	Taeniopygia_guttata
ENSPCIG00000014865	LSM10	76	68.932	ENSTRUG00000010531	oscp1a	83	68.932	Takifugu_rubripes
ENSPCIG00000014865	LSM10	76	86.408	ENSTBEG00000016674	LSM10	84	86.408	Tupaia_belangeri
ENSPCIG00000014865	LSM10	76	84.466	ENSUAMG00000020265	LSM10	84	84.466	Ursus_americanus
ENSPCIG00000014865	LSM10	76	86.408	ENSVVUG00000023209	LSM10	84	86.408	Vulpes_vulpes
ENSPCIG00000014865	LSM10	74	72.277	ENSXETG00000027631	lsm10	83	72.277	Xenopus_tropicalis
ENSPCIG00000014865	LSM10	75	63.725	ENSXCOG00000018776	oscp1a	64	63.725	Xiphophorus_couchianus
ENSPCIG00000014865	LSM10	69	67.021	ENSXMAG00000019963	oscp1a	75	67.021	Xiphophorus_maculatus