EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000015040 (Gene tree)
Gene ID: -
Gene Symbol: VARS2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 16967 bases
Position: chrFUWB01000926.1:751894-768860
Accession: 21642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000019732	tRNA-synt_1g	PF09334.11	4.6e-16	1	1
ENSPCIP00000019727	tRNA-synt_1g	PF09334.11	5.9e-16	1	1
ENSPCIP00000019721	tRNA-synt_1g	PF09334.11	6.6e-16	1	1
ENSPCIP00000019736	tRNA-synt_1g	PF09334.11	7.5e-16	1	1
ENSPCIP00000019730	tRNA-synt_1g	PF09334.11	6.5e-14	1	1
ENSPCIP00000019736	Anticodon_1	PF08264.13	9.9e-29	1	1
ENSPCIP00000019730	Anticodon_1	PF08264.13	1.1e-28	1	1
ENSPCIP00000019727	Anticodon_1	PF08264.13	1.1e-28	1	1
ENSPCIP00000019721	Anticodon_1	PF08264.13	1.2e-28	1	1
ENSPCIP00000019732	Anticodon_1	PF08264.13	5.6e-16	1	1
ENSPCIP00000019732	tRNA-synt_1	PF00133.22	1.4e-184	1	1
ENSPCIP00000019727	tRNA-synt_1	PF00133.22	1.7e-184	1	1
ENSPCIP00000019721	tRNA-synt_1	PF00133.22	1.9e-184	1	1
ENSPCIP00000019736	tRNA-synt_1	PF00133.22	1.2e-168	1	2
ENSPCIP00000019736	tRNA-synt_1	PF00133.22	1.2e-168	2	2
ENSPCIP00000019730	tRNA-synt_1	PF00133.22	3.9e-165	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000024351	VARS2-203	5151	-	ENSPCIP00000019730	1023 (aa)	-	-
ENSPCIT00000024359	VARS2-205	5055	-	ENSPCIP00000019736	991 (aa)	-	-
ENSPCIT00000024355	VARS2-204	5103	-	ENSPCIP00000019732	1007 (aa)	-	-
ENSPCIT00000024341	VARS2-201	5354	-	ENSPCIP00000019721	1082 (aa)	-	-
ENSPCIT00000024348	VARS2-202	5256	-	ENSPCIP00000019727	1058 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000015040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000015040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000015040	VARS2	91	65.179	ENSPCIG00000018553	VARS	78	51.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000015040	VARS2	92	52.217	ENSAPOG00000007396	vars2	95	50.949	Acanthochromis_polyacanthus
ENSPCIG00000015040	VARS2	99	77.862	ENSAMEG00000012997	VARS2	97	77.862	Ailuropoda_melanoleuca
ENSPCIG00000015040	VARS2	97	50.949	ENSACIG00000004344	vars2	96	51.245	Amphilophus_citrinellus
ENSPCIG00000015040	VARS2	92	52.118	ENSAOCG00000000476	vars2	95	50.854	Amphiprion_ocellaris
ENSPCIG00000015040	VARS2	92	52.217	ENSAPEG00000008646	vars2	93	50.949	Amphiprion_percula
ENSPCIG00000015040	VARS2	91	53.072	ENSATEG00000012291	vars2	95	51.852	Anabas_testudineus
ENSPCIG00000015040	VARS2	95	59.496	ENSACAG00000022093	VARS2	93	60.277	Anolis_carolinensis
ENSPCIG00000015040	VARS2	99	76.632	ENSANAG00000038018	VARS2	99	76.632	Aotus_nancymaae
ENSPCIG00000015040	VARS2	97	50.708	ENSACLG00000018673	vars2	96	51.098	Astatotilapia_calliptera
ENSPCIG00000015040	VARS2	95	52.987	ENSAMXG00000017773	vars2	96	54.317	Astyanax_mexicanus
ENSPCIG00000015040	VARS2	99	76.091	ENSBTAG00000010698	VARS2	99	75.898	Bos_taurus
ENSPCIG00000015040	VARS2	99	76.632	ENSCJAG00000019826	VARS2	99	76.632	Callithrix_jacchus
ENSPCIG00000015040	VARS2	99	76.543	ENSCAFG00000000454	VARS2	99	76.543	Canis_familiaris
ENSPCIG00000015040	VARS2	87	78.393	ENSCAFG00020019387	VARS2	94	78.463	Canis_lupus_dingo
ENSPCIG00000015040	VARS2	99	76.209	ENSCHIG00000007847	VARS2	99	76.087	Capra_hircus
ENSPCIG00000015040	VARS2	99	77.599	ENSTSYG00000009904	VARS2	99	77.599	Carlito_syrichta
ENSPCIG00000015040	VARS2	88	75.888	ENSCAPG00000017770	VARS2	99	75.888	Cavia_aperea
ENSPCIG00000015040	VARS2	99	74.434	ENSCPOG00000021834	VARS2	99	74.434	Cavia_porcellus
ENSPCIG00000015040	VARS2	99	77.010	ENSCCAG00000037907	VARS2	99	77.010	Cebus_capucinus
ENSPCIG00000015040	VARS2	99	77.200	ENSCATG00000032554	VARS2	99	77.200	Cercocebus_atys
ENSPCIG00000015040	VARS2	99	74.410	ENSCLAG00000002889	VARS2	99	74.410	Chinchilla_lanigera
ENSPCIG00000015040	VARS2	99	77.200	ENSCSAG00000008327	VARS2	99	77.200	Chlorocebus_sabaeus
ENSPCIG00000015040	VARS2	90	62.998	ENSCPBG00000021502	VARS2	95	62.959	Chrysemys_picta_bellii
ENSPCIG00000015040	VARS2	99	76.821	ENSCANG00000014991	VARS2	99	76.821	Colobus_angolensis_palliatus
ENSPCIG00000015040	VARS2	99	74.641	ENSCGRG00001021535	Vars2	99	74.386	Cricetulus_griseus_chok1gshd
ENSPCIG00000015040	VARS2	99	74.641	ENSCGRG00000014112	Vars2	99	74.386	Cricetulus_griseus_crigri
ENSPCIG00000015040	VARS2	84	56.808	ENSCSEG00000015432	vars2	93	56.808	Cynoglossus_semilaevis
ENSPCIG00000015040	VARS2	65	53.099	ENSCVAG00000017765	vars2	98	53.099	Cyprinodon_variegatus
ENSPCIG00000015040	VARS2	92	54.536	ENSDARG00000056717	vars2	96	53.372	Danio_rerio
ENSPCIG00000015040	VARS2	80	76.123	ENSDORG00000008516	Vars2	94	76.123	Dipodomys_ordii
ENSPCIG00000015040	VARS2	99	73.540	ENSETEG00000014844	VARS2	99	67.928	Echinops_telfairi
ENSPCIG00000015040	VARS2	99	77.557	ENSEASG00005019997	VARS2	97	77.557	Equus_asinus_asinus
ENSPCIG00000015040	VARS2	99	77.883	ENSECAG00000018202	VARS2	99	77.883	Equus_caballus
ENSPCIG00000015040	VARS2	62	77.670	ENSEEUG00000012591	-	63	77.670	Erinaceus_europaeus
ENSPCIG00000015040	VARS2	93	52.976	ENSELUG00000017824	vars2	97	52.162	Esox_lucius
ENSPCIG00000015040	VARS2	99	77.410	ENSFCAG00000010531	VARS2	99	77.410	Felis_catus
ENSPCIG00000015040	VARS2	99	75.425	ENSFDAG00000017216	VARS2	99	75.425	Fukomys_damarensis
ENSPCIG00000015040	VARS2	85	54.577	ENSFHEG00000013932	vars2	89	54.920	Fundulus_heteroclitus
ENSPCIG00000015040	VARS2	89	55.310	ENSGMOG00000018960	vars2	98	55.310	Gadus_morhua
ENSPCIG00000015040	VARS2	85	47.691	ENSGAFG00000004737	vars2	92	47.691	Gambusia_affinis
ENSPCIG00000015040	VARS2	88	54.846	ENSGACG00000001464	vars2	96	54.565	Gasterosteus_aculeatus
ENSPCIG00000015040	VARS2	91	67.841	ENSGAGG00000011652	VARS2	95	63.974	Gopherus_agassizii
ENSPCIG00000015040	VARS2	99	77.294	ENSGGOG00000014587	VARS2	99	77.294	Gorilla_gorilla
ENSPCIG00000015040	VARS2	89	52.094	ENSHBUG00000002448	vars2	93	52.152	Haplochromis_burtoni
ENSPCIG00000015040	VARS2	99	74.857	ENSHGLG00000012886	VARS2	96	74.315	Heterocephalus_glaber_female
ENSPCIG00000015040	VARS2	99	74.221	ENSHGLG00100016535	VARS2	99	74.221	Heterocephalus_glaber_male
ENSPCIG00000015040	VARS2	71	49.098	ENSHCOG00000017907	vars2	94	52.408	Hippocampus_comes
ENSPCIG00000015040	VARS2	89	55.775	ENSIPUG00000015573	Vars2	92	54.472	Ictalurus_punctatus
ENSPCIG00000015040	VARS2	99	76.087	ENSSTOG00000009924	VARS2	99	76.087	Ictidomys_tridecemlineatus
ENSPCIG00000015040	VARS2	99	73.794	ENSJJAG00000011144	Vars2	99	73.794	Jaculus_jaculus
ENSPCIG00000015040	VARS2	93	51.619	ENSKMAG00000001393	vars2	96	51.005	Kryptolebias_marmoratus
ENSPCIG00000015040	VARS2	55	63.243	ENSLBEG00000005480	-	82	62.770	Labrus_bergylta
ENSPCIG00000015040	VARS2	96	51.141	ENSLBEG00000011949	vars2	95	51.257	Labrus_bergylta
ENSPCIG00000015040	VARS2	95	51.981	ENSLACG00000001576	-	96	53.159	Latimeria_chalumnae
ENSPCIG00000015040	VARS2	99	75.758	ENSLAFG00000015183	VARS2	99	75.758	Loxodonta_africana
ENSPCIG00000015040	VARS2	99	77.010	ENSMFAG00000042367	VARS2	99	77.010	Macaca_fascicularis
ENSPCIG00000015040	VARS2	99	77.105	ENSMMUG00000018609	VARS2	99	77.105	Macaca_mulatta
ENSPCIG00000015040	VARS2	99	77.105	ENSMNEG00000043163	VARS2	99	77.105	Macaca_nemestrina
ENSPCIG00000015040	VARS2	99	77.294	ENSMLEG00000041728	VARS2	97	77.294	Mandrillus_leucophaeus
ENSPCIG00000015040	VARS2	95	50.529	ENSMAMG00000020339	vars2	95	50.774	Mastacembelus_armatus
ENSPCIG00000015040	VARS2	97	50.614	ENSMZEG00005017669	vars2	96	51.003	Maylandia_zebra
ENSPCIG00000015040	VARS2	99	75.354	ENSMAUG00000018946	Vars2	99	75.354	Mesocricetus_auratus
ENSPCIG00000015040	VARS2	84	78.027	ENSMICG00000005365	VARS2	100	78.027	Microcebus_murinus
ENSPCIG00000015040	VARS2	94	77.458	ENSMOCG00000014607	Vars2	99	77.458	Microtus_ochrogaster
ENSPCIG00000015040	VARS2	91	51.874	ENSMMOG00000012122	vars2	95	50.787	Mola_mola
ENSPCIG00000015040	VARS2	99	87.559	ENSMODG00000015848	VARS2	99	87.559	Monodelphis_domestica
ENSPCIG00000015040	VARS2	91	51.509	ENSMALG00000009217	vars2	95	52.604	Monopterus_albus
ENSPCIG00000015040	VARS2	99	75.520	MGP_CAROLIEiJ_G0021529	Vars2	99	75.520	Mus_caroli
ENSPCIG00000015040	VARS2	99	75.614	ENSMUSG00000038838	Vars2	99	75.614	Mus_musculus
ENSPCIG00000015040	VARS2	99	76.465	MGP_PahariEiJ_G0020523	Vars2	99	76.465	Mus_pahari
ENSPCIG00000015040	VARS2	99	75.614	MGP_SPRETEiJ_G0022436	Vars2	99	75.614	Mus_spretus
ENSPCIG00000015040	VARS2	99	76.916	ENSMPUG00000011643	VARS2	99	76.916	Mustela_putorius_furo
ENSPCIG00000015040	VARS2	99	74.438	ENSMLUG00000002356	VARS2	97	74.345	Myotis_lucifugus
ENSPCIG00000015040	VARS2	97	70.492	ENSNGAG00000020607	Vars2	99	69.763	Nannospalax_galili
ENSPCIG00000015040	VARS2	66	57.566	ENSNBRG00000001624	vars2	57	57.566	Neolamprologus_brichardi
ENSPCIG00000015040	VARS2	99	74.456	ENSNLEG00000005625	VARS2	97	74.456	Nomascus_leucogenys
ENSPCIG00000015040	VARS2	83	93.562	ENSMEUG00000014475	VARS2	90	93.562	Notamacropus_eugenii
ENSPCIG00000015040	VARS2	94	70.354	ENSOPRG00000000682	VARS2	89	72.000	Ochotona_princeps
ENSPCIG00000015040	VARS2	99	73.629	ENSODEG00000017965	VARS2	99	73.629	Octodon_degus
ENSPCIG00000015040	VARS2	67	56.968	ENSONIG00000004734	vars2	71	56.968	Oreochromis_niloticus
ENSPCIG00000015040	VARS2	82	61.406	ENSOANG00000000398	-	99	61.406	Ornithorhynchus_anatinus
ENSPCIG00000015040	VARS2	99	70.743	ENSOCUG00000021496	VARS2	64	70.638	Oryctolagus_cuniculus
ENSPCIG00000015040	VARS2	91	51.944	ENSORLG00000010632	vars2	94	51.265	Oryzias_latipes
ENSPCIG00000015040	VARS2	91	52.243	ENSORLG00020018584	vars2	98	50.186	Oryzias_latipes_hni
ENSPCIG00000015040	VARS2	91	52.044	ENSORLG00015010408	vars2	96	50.718	Oryzias_latipes_hsok
ENSPCIG00000015040	VARS2	91	52.510	ENSOMEG00000008360	vars2	95	51.307	Oryzias_melastigma
ENSPCIG00000015040	VARS2	99	76.887	ENSOGAG00000006087	VARS2	97	76.887	Otolemur_garnettii
ENSPCIG00000015040	VARS2	99	75.189	ENSOARG00000010844	VARS2	98	75.071	Ovis_aries
ENSPCIG00000015040	VARS2	99	77.105	ENSPPAG00000041141	VARS2	99	77.105	Pan_paniscus
ENSPCIG00000015040	VARS2	99	77.557	ENSPPRG00000006751	VARS2	97	77.557	Panthera_pardus
ENSPCIG00000015040	VARS2	99	77.557	ENSPTIG00000017799	VARS2	98	79.697	Panthera_tigris_altaica
ENSPCIG00000015040	VARS2	99	77.105	ENSPTRG00000034497	VARS2	99	77.105	Pan_troglodytes
ENSPCIG00000015040	VARS2	99	77.578	ENSPANG00000018481	VARS2	100	77.713	Papio_anubis
ENSPCIG00000015040	VARS2	99	52.064	ENSPKIG00000011372	vars2	96	52.987	Paramormyrops_kingsleyae
ENSPCIG00000015040	VARS2	62	66.876	ENSPSIG00000006206	VARS2	92	67.026	Pelodiscus_sinensis
ENSPCIG00000015040	VARS2	96	52.908	ENSPMGG00000000465	vars2	94	53.899	Periophthalmus_magnuspinnatus
ENSPCIG00000015040	VARS2	99	74.858	ENSPEMG00000014691	Vars2	99	74.858	Peromyscus_maniculatus_bairdii
ENSPCIG00000015040	VARS2	92	52.433	ENSPFOG00000017616	vars2	95	51.603	Poecilia_formosa
ENSPCIG00000015040	VARS2	92	51.980	ENSPLAG00000019778	vars2	98	49.814	Poecilia_latipinna
ENSPCIG00000015040	VARS2	92	52.079	ENSPMEG00000011123	vars2	98	49.953	Poecilia_mexicana
ENSPCIG00000015040	VARS2	88	47.767	ENSPREG00000014998	vars2	96	45.849	Poecilia_reticulata
ENSPCIG00000015040	VARS2	99	76.916	ENSPPYG00000016424	VARS2	99	76.916	Pongo_abelii
ENSPCIG00000015040	VARS2	82	85.075	ENSPCAG00000006946	VARS2	77	85.075	Procavia_capensis
ENSPCIG00000015040	VARS2	99	75.895	ENSPCOG00000014839	VARS2	97	75.895	Propithecus_coquereli
ENSPCIG00000015040	VARS2	99	75.898	ENSPVAG00000004197	VARS2	99	75.898	Pteropus_vampyrus
ENSPCIG00000015040	VARS2	79	57.995	ENSPNYG00000010314	vars2	95	58.311	Pundamilia_nyererei
ENSPCIG00000015040	VARS2	94	61.740	ENSPNAG00000026793	vars2	96	53.956	Pygocentrus_nattereri
ENSPCIG00000015040	VARS2	99	75.024	ENSRNOG00000000833	Vars2	99	75.024	Rattus_norvegicus
ENSPCIG00000015040	VARS2	99	76.821	ENSRBIG00000032725	VARS2	99	76.821	Rhinopithecus_bieti
ENSPCIG00000015040	VARS2	99	77.010	ENSRROG00000043847	VARS2	99	77.010	Rhinopithecus_roxellana
ENSPCIG00000015040	VARS2	99	75.070	ENSSBOG00000033240	VARS2	97	75.070	Saimiri_boliviensis_boliviensis
ENSPCIG00000015040	VARS2	99	89.489	ENSSHAG00000009307	VARS2	100	89.489	Sarcophilus_harrisii
ENSPCIG00000015040	VARS2	96	53.468	ENSSFOG00015016187	vars2	96	53.435	Scleropages_formosus
ENSPCIG00000015040	VARS2	93	53.141	ENSSMAG00000020842	vars2	92	53.776	Scophthalmus_maximus
ENSPCIG00000015040	VARS2	92	51.833	ENSSDUG00000011598	vars2	95	51.212	Seriola_dumerili
ENSPCIG00000015040	VARS2	91	52.518	ENSSLDG00000015492	vars2	94	50.780	Seriola_lalandi_dorsalis
ENSPCIG00000015040	VARS2	57	88.000	ENSSARG00000003786	-	69	83.942	Sorex_araneus
ENSPCIG00000015040	VARS2	88	59.743	ENSSPUG00000014700	VARS2	96	58.603	Sphenodon_punctatus
ENSPCIG00000015040	VARS2	93	50.406	ENSSPAG00000004654	vars2	94	49.459	Stegastes_partitus
ENSPCIG00000015040	VARS2	99	77.788	ENSSSCG00000001384	VARS2	99	78.687	Sus_scrofa
ENSPCIG00000015040	VARS2	89	55.111	ENSTRUG00000005264	vars2	95	52.344	Takifugu_rubripes
ENSPCIG00000015040	VARS2	96	51.495	ENSTNIG00000005916	vars2	95	51.852	Tetraodon_nigroviridis
ENSPCIG00000015040	VARS2	52	80.303	ENSTBEG00000007976	-	52	80.303	Tupaia_belangeri
ENSPCIG00000015040	VARS2	95	72.179	ENSTTRG00000012243	VARS2	95	72.179	Tursiops_truncatus
ENSPCIG00000015040	VARS2	99	76.959	ENSUAMG00000026124	VARS2	99	79.085	Ursus_americanus
ENSPCIG00000015040	VARS2	99	77.788	ENSUMAG00000019894	VARS2	99	77.788	Ursus_maritimus
ENSPCIG00000015040	VARS2	99	76.560	ENSVVUG00000010754	VARS2	94	76.560	Vulpes_vulpes
ENSPCIG00000015040	VARS2	89	56.649	ENSXETG00000003036	vars2	99	56.649	Xenopus_tropicalis
ENSPCIG00000015040	VARS2	88	53.968	ENSXCOG00000003455	vars2	97	51.423	Xiphophorus_couchianus
ENSPCIG00000015040	VARS2	92	51.485	ENSXMAG00000013523	vars2	98	49.813	Xiphophorus_maculatus