EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000015513 (Gene tree)
Gene ID: 110199141
Gene Symbol: RRP1B
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 54290 bases
Position: chrFUWB01002340.1:124812-179101
Accession: 23818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000020375	Nop52	PF05997.12	2.5e-70	1	1
ENSPCIP00000020378	Nop52	PF05997.12	3e-70	1	1
ENSPCIP00000020381	Nop52	PF05997.12	4.8e-70	1	1
ENSPCIP00000020380	Nop52	PF05997.12	4.9e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000025137	RRP1B-204	2567	-	ENSPCIP00000020381	711 (aa)	-	-
ENSPCIT00000025129	RRP1B-201	2618	-	ENSPCIP00000020375	728 (aa)	-	-
ENSPCIT00000025134	RRP1B-203	2591	-	ENSPCIP00000020380	719 (aa)	-	-
ENSPCIT00000025132	RRP1B-202	2720	-	ENSPCIP00000020378	762 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000015513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000015513's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000015513	RRP1B	84	44.753	ENSPCIG00000015523	-	82	57.623

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000015513	RRP1B	57	51.951	ENSG00000160214	RRP1	78	65.714	Homo_sapiens
ENSPCIG00000015513	RRP1B	100	66.230	ENSG00000160208	RRP1B	100	66.230	Homo_sapiens
ENSPCIG00000015513	RRP1B	64	54.545	ENSAPOG00000007490	-	55	48.352	Acanthochromis_polyacanthus
ENSPCIG00000015513	RRP1B	71	87.500	ENSAMEG00000011401	RRP1B	99	56.978	Ailuropoda_melanoleuca
ENSPCIG00000015513	RRP1B	54	52.821	ENSAMEG00000011448	RRP1	83	52.442	Ailuropoda_melanoleuca
ENSPCIG00000015513	RRP1B	58	67.391	ENSAOCG00000017894	-	100	50.704	Amphiprion_ocellaris
ENSPCIG00000015513	RRP1B	64	52.525	ENSAPEG00000024150	-	51	49.598	Amphiprion_percula
ENSPCIG00000015513	RRP1B	65	52.475	ENSATEG00000005045	-	56	48.549	Anabas_testudineus
ENSPCIG00000015513	RRP1B	94	52.517	ENSAPLG00000004310	RRP1B	100	51.701	Anas_platyrhynchos
ENSPCIG00000015513	RRP1B	99	48.698	ENSACAG00000017851	RRP1B	95	48.571	Anolis_carolinensis
ENSPCIG00000015513	RRP1B	100	64.798	ENSANAG00000034889	RRP1B	100	64.444	Aotus_nancymaae
ENSPCIG00000015513	RRP1B	100	60.000	ENSBTAG00000017418	RRP1B	100	60.131	Bos_taurus
ENSPCIG00000015513	RRP1B	52	52.432	ENSBTAG00000003981	RRP1	81	51.622	Bos_taurus
ENSPCIG00000015513	RRP1B	53	52.742	ENSCJAG00000043205	RRP1	77	52.742	Callithrix_jacchus
ENSPCIG00000015513	RRP1B	100	63.316	ENSCJAG00000017077	RRP1B	100	63.089	Callithrix_jacchus
ENSPCIG00000015513	RRP1B	94	61.389	ENSCAFG00000010621	RRP1B	99	61.859	Canis_familiaris
ENSPCIG00000015513	RRP1B	52	51.979	ENSCAFG00000010646	RRP1	68	63.830	Canis_familiaris
ENSPCIG00000015513	RRP1B	100	62.092	ENSCAFG00020018901	RRP1B	100	62.272	Canis_lupus_dingo
ENSPCIG00000015513	RRP1B	52	51.979	ENSCAFG00020018979	RRP1	76	54.624	Canis_lupus_dingo
ENSPCIG00000015513	RRP1B	100	60.944	ENSCHIG00000021519	RRP1B	100	61.599	Capra_hircus
ENSPCIG00000015513	RRP1B	56	48.426	ENSTSYG00000012831	RRP1	83	48.705	Carlito_syrichta
ENSPCIG00000015513	RRP1B	100	55.253	ENSCPOG00000002396	RRP1B	100	54.545	Cavia_porcellus
ENSPCIG00000015513	RRP1B	100	63.969	ENSCCAG00000029384	RRP1B	100	63.743	Cebus_capucinus
ENSPCIG00000015513	RRP1B	60	49.103	ENSCCAG00000029828	RRP1	80	52.895	Cebus_capucinus
ENSPCIG00000015513	RRP1B	100	65.752	ENSCATG00000017423	RRP1B	100	65.752	Cercocebus_atys
ENSPCIG00000015513	RRP1B	99	75.811	ENSCLAG00000005622	RRP1B	100	57.000	Chinchilla_lanigera
ENSPCIG00000015513	RRP1B	59	46.838	ENSCLAG00000011639	RRP1	84	48.586	Chinchilla_lanigera
ENSPCIG00000015513	RRP1B	100	65.576	ENSCSAG00000007961	RRP1B	100	65.576	Chlorocebus_sabaeus
ENSPCIG00000015513	RRP1B	53	61.979	ENSCHOG00000002426	-	63	61.198	Choloepus_hoffmanni
ENSPCIG00000015513	RRP1B	99	58.559	ENSCPBG00000010310	RRP1B	99	57.026	Chrysemys_picta_bellii
ENSPCIG00000015513	RRP1B	58	34.293	ENSCING00000003304	-	56	43.172	Ciona_intestinalis
ENSPCIG00000015513	RRP1B	100	66.057	ENSCANG00000040952	RRP1B	100	65.666	Colobus_angolensis_palliatus
ENSPCIG00000015513	RRP1B	100	58.901	ENSCGRG00001010889	-	100	58.571	Cricetulus_griseus_chok1gshd
ENSPCIG00000015513	RRP1B	100	58.639	ENSCGRG00001023882	-	100	58.127	Cricetulus_griseus_chok1gshd
ENSPCIG00000015513	RRP1B	51	52.989	ENSCGRG00001011920	Rrp1	82	52.561	Cricetulus_griseus_chok1gshd
ENSPCIG00000015513	RRP1B	51	52.989	ENSCGRG00000008915	Rrp1	82	52.561	Cricetulus_griseus_crigri
ENSPCIG00000015513	RRP1B	94	57.975	ENSCGRG00000001553	Rrp1b	97	57.555	Cricetulus_griseus_crigri
ENSPCIG00000015513	RRP1B	63	52.688	ENSCSEG00000020711	-	78	52.688	Cynoglossus_semilaevis
ENSPCIG00000015513	RRP1B	51	45.205	ENSCVAG00000017568	-	93	44.658	Cyprinodon_variegatus
ENSPCIG00000015513	RRP1B	60	47.110	ENSDARG00000103337	rrp1	59	45.856	Danio_rerio
ENSPCIG00000015513	RRP1B	62	47.872	ENSDNOG00000019880	RRP1	82	53.316	Dasypus_novemcinctus
ENSPCIG00000015513	RRP1B	100	61.278	ENSDNOG00000032774	RRP1B	100	60.417	Dasypus_novemcinctus
ENSPCIG00000015513	RRP1B	93	55.278	ENSDORG00000005496	Rrp1b	100	55.556	Dipodomys_ordii
ENSPCIG00000015513	RRP1B	100	54.826	ENSETEG00000019489	RRP1B	100	54.935	Echinops_telfairi
ENSPCIG00000015513	RRP1B	61	46.309	ENSEASG00005001673	RRP1	83	53.050	Equus_asinus_asinus
ENSPCIG00000015513	RRP1B	100	64.883	ENSEASG00005001687	RRP1B	100	64.613	Equus_asinus_asinus
ENSPCIG00000015513	RRP1B	61	47.856	ENSECAG00000015703	RRP1	83	53.826	Equus_caballus
ENSPCIG00000015513	RRP1B	100	64.883	ENSECAG00000018018	RRP1B	100	64.613	Equus_caballus
ENSPCIG00000015513	RRP1B	63	58.824	ENSELUG00000015885	-	89	49.085	Esox_lucius
ENSPCIG00000015513	RRP1B	100	61.518	ENSFCAG00000010272	RRP1B	100	61.387	Felis_catus
ENSPCIG00000015513	RRP1B	58	50.000	ENSFCAG00000008434	RRP1	88	50.488	Felis_catus
ENSPCIG00000015513	RRP1B	92	50.139	ENSFALG00000002024	RRP1B	100	49.096	Ficedula_albicollis
ENSPCIG00000015513	RRP1B	59	48.456	ENSFDAG00000013728	RRP1	82	51.862	Fukomys_damarensis
ENSPCIG00000015513	RRP1B	96	55.935	ENSFDAG00000010899	RRP1B	96	54.980	Fukomys_damarensis
ENSPCIG00000015513	RRP1B	58	50.980	ENSFHEG00000016314	-	51	51.961	Fundulus_heteroclitus
ENSPCIG00000015513	RRP1B	62	52.439	ENSGMOG00000001953	-	65	52.439	Gadus_morhua
ENSPCIG00000015513	RRP1B	100	52.503	ENSGALG00000035696	RRP1B	100	52.605	Gallus_gallus
ENSPCIG00000015513	RRP1B	100	37.313	ENSGACG00000001438	rrp1	76	45.504	Gasterosteus_aculeatus
ENSPCIG00000015513	RRP1B	100	58.056	ENSGAGG00000000375	RRP1B	100	57.584	Gopherus_agassizii
ENSPCIG00000015513	RRP1B	57	51.816	ENSGGOG00000000173	RRP1	80	54.111	Gorilla_gorilla
ENSPCIG00000015513	RRP1B	100	66.099	ENSGGOG00000012069	RRP1B	100	66.099	Gorilla_gorilla
ENSPCIG00000015513	RRP1B	99	57.737	ENSHGLG00000004968	RRP1B	100	57.612	Heterocephalus_glaber_female
ENSPCIG00000015513	RRP1B	75	67.785	ENSHGLG00100002232	RRP1B	86	63.977	Heterocephalus_glaber_male
ENSPCIG00000015513	RRP1B	65	48.387	ENSHCOG00000018388	-	58	48.387	Hippocampus_comes
ENSPCIG00000015513	RRP1B	60	50.667	ENSIPUG00000000673	-	73	45.646	Ictalurus_punctatus
ENSPCIG00000015513	RRP1B	55	51.538	ENSSTOG00000011116	RRP1	86	50.769	Ictidomys_tridecemlineatus
ENSPCIG00000015513	RRP1B	99	60.422	ENSSTOG00000011790	RRP1B	96	60.417	Ictidomys_tridecemlineatus
ENSPCIG00000015513	RRP1B	100	53.905	ENSJJAG00000021279	Rrp1b	100	54.092	Jaculus_jaculus
ENSPCIG00000015513	RRP1B	60	48.800	ENSKMAG00000005539	rrp1	73	48.800	Kryptolebias_marmoratus
ENSPCIG00000015513	RRP1B	99	44.129	ENSLACG00000017332	-	99	44.216	Latimeria_chalumnae
ENSPCIG00000015513	RRP1B	61	61.538	ENSLOCG00000004064	-	64	61.538	Lepisosteus_oculatus
ENSPCIG00000015513	RRP1B	53	52.835	ENSLAFG00000022901	RRP1	85	52.835	Loxodonta_africana
ENSPCIG00000015513	RRP1B	89	61.079	ENSLAFG00000000766	RRP1B	100	63.362	Loxodonta_africana
ENSPCIG00000015513	RRP1B	100	65.752	ENSMFAG00000039152	RRP1B	100	65.752	Macaca_fascicularis
ENSPCIG00000015513	RRP1B	100	63.791	ENSMMUG00000000104	RRP1B	100	63.791	Macaca_mulatta
ENSPCIG00000015513	RRP1B	100	65.882	ENSMNEG00000034269	RRP1B	100	65.882	Macaca_nemestrina
ENSPCIG00000015513	RRP1B	94	64.820	ENSMLEG00000040044	RRP1B	99	64.820	Mandrillus_leucophaeus
ENSPCIG00000015513	RRP1B	100	51.088	ENSMGAG00000014591	RRP1B	100	50.818	Meleagris_gallopavo
ENSPCIG00000015513	RRP1B	100	55.585	ENSMAUG00000021508	Rrp1b	100	55.601	Mesocricetus_auratus
ENSPCIG00000015513	RRP1B	53	52.551	ENSMICG00000004700	RRP1	84	52.604	Microcebus_murinus
ENSPCIG00000015513	RRP1B	100	65.576	ENSMICG00000004686	RRP1B	100	65.838	Microcebus_murinus
ENSPCIG00000015513	RRP1B	100	54.498	ENSMOCG00000001117	Rrp1b	100	54.086	Microtus_ochrogaster
ENSPCIG00000015513	RRP1B	51	41.918	ENSMMOG00000019175	rrp1	92	41.918	Mola_mola
ENSPCIG00000015513	RRP1B	100	87.927	ENSMODG00000021033	RRP1B	100	87.927	Monodelphis_domestica
ENSPCIG00000015513	RRP1B	52	47.745	ENSMALG00000010310	rrp1	97	47.872	Monopterus_albus
ENSPCIG00000015513	RRP1B	100	53.846	MGP_CAROLIEiJ_G0021376	Rrp1b	100	53.725	Mus_caroli
ENSPCIG00000015513	RRP1B	100	53.455	ENSMUSG00000058392	Rrp1b	100	53.325	Mus_musculus
ENSPCIG00000015513	RRP1B	100	54.427	MGP_PahariEiJ_G0023695	Rrp1b	100	55.123	Mus_pahari
ENSPCIG00000015513	RRP1B	100	54.759	MGP_SPRETEiJ_G0022290	Rrp1b	100	54.107	Mus_spretus
ENSPCIG00000015513	RRP1B	88	57.009	ENSMPUG00000009810	RRP1B	99	57.387	Mustela_putorius_furo
ENSPCIG00000015513	RRP1B	54	46.396	ENSMPUG00000009826	RRP1	85	48.086	Mustela_putorius_furo
ENSPCIG00000015513	RRP1B	50	63.596	ENSMLUG00000017788	RRP1	67	63.830	Myotis_lucifugus
ENSPCIG00000015513	RRP1B	99	64.073	ENSMLUG00000007738	RRP1B	99	63.755	Myotis_lucifugus
ENSPCIG00000015513	RRP1B	100	55.484	ENSNGAG00000021073	Rrp1b	100	55.932	Nannospalax_galili
ENSPCIG00000015513	RRP1B	57	51.574	ENSNLEG00000034734	RRP1	80	53.581	Nomascus_leucogenys
ENSPCIG00000015513	RRP1B	100	64.267	ENSNLEG00000001490	RRP1B	100	64.267	Nomascus_leucogenys
ENSPCIG00000015513	RRP1B	75	97.479	ENSMEUG00000003226	-	89	97.479	Notamacropus_eugenii
ENSPCIG00000015513	RRP1B	100	53.121	ENSODEG00000013177	RRP1B	100	52.660	Octodon_degus
ENSPCIG00000015513	RRP1B	99	57.030	ENSOANG00000006470	RRP1B	99	57.030	Ornithorhynchus_anatinus
ENSPCIG00000015513	RRP1B	94	51.209	ENSOCUG00000025931	RRP1B	100	51.000	Oryctolagus_cuniculus
ENSPCIG00000015513	RRP1B	66	53.333	ENSORLG00020007199	-	71	49.855	Oryzias_latipes_hni
ENSPCIG00000015513	RRP1B	65	55.294	ENSORLG00015004425	-	63	50.398	Oryzias_latipes_hsok
ENSPCIG00000015513	RRP1B	66	56.790	ENSOMEG00000016910	-	61	50.943	Oryzias_melastigma
ENSPCIG00000015513	RRP1B	87	72.727	ENSOGAG00000009872	RRP1B	99	72.727	Otolemur_garnettii
ENSPCIG00000015513	RRP1B	52	53.003	ENSOGAG00000006105	RRP1	83	52.756	Otolemur_garnettii
ENSPCIG00000015513	RRP1B	94	58.391	ENSOARG00000011314	RRP1B	100	58.946	Ovis_aries
ENSPCIG00000015513	RRP1B	94	65.049	ENSPPAG00000035319	RRP1B	99	64.958	Pan_paniscus
ENSPCIG00000015513	RRP1B	100	60.471	ENSPPRG00000010356	RRP1B	100	60.340	Panthera_pardus
ENSPCIG00000015513	RRP1B	58	49.268	ENSPPRG00000010656	RRP1	82	52.533	Panthera_pardus
ENSPCIG00000015513	RRP1B	66	80.233	ENSPTIG00000016894	RRP1B	95	66.753	Panthera_tigris_altaica
ENSPCIG00000015513	RRP1B	53	43.536	ENSPTIG00000019473	RRP1	73	46.667	Panthera_tigris_altaica
ENSPCIG00000015513	RRP1B	57	52.195	ENSPTRG00000013962	RRP1	80	54.907	Pan_troglodytes
ENSPCIG00000015513	RRP1B	100	66.361	ENSPTRG00000013958	RRP1B	100	66.361	Pan_troglodytes
ENSPCIG00000015513	RRP1B	100	66.144	ENSPANG00000011090	RRP1B	100	66.144	Papio_anubis
ENSPCIG00000015513	RRP1B	53	52.895	ENSPANG00000015097	RRP1	80	53.581	Papio_anubis
ENSPCIG00000015513	RRP1B	52	50.524	ENSPKIG00000003422	-	60	51.003	Paramormyrops_kingsleyae
ENSPCIG00000015513	RRP1B	99	56.606	ENSPSIG00000008152	RRP1B	96	57.529	Pelodiscus_sinensis
ENSPCIG00000015513	RRP1B	51	42.287	ENSPMGG00000007512	-	95	40.594	Periophthalmus_magnuspinnatus
ENSPCIG00000015513	RRP1B	100	55.701	ENSPEMG00000022490	Rrp1b	100	55.774	Peromyscus_maniculatus_bairdii
ENSPCIG00000015513	RRP1B	100	37.438	ENSPFOG00000007424	-	99	37.221	Poecilia_formosa
ENSPCIG00000015513	RRP1B	66	41.201	ENSPLAG00000016684	-	55	46.465	Poecilia_latipinna
ENSPCIG00000015513	RRP1B	63	53.191	ENSPMEG00000007042	-	80	46.465	Poecilia_mexicana
ENSPCIG00000015513	RRP1B	87	47.826	ENSPREG00000015673	-	77	47.283	Poecilia_reticulata
ENSPCIG00000015513	RRP1B	100	66.361	ENSPPYG00000011470	RRP1B	100	66.361	Pongo_abelii
ENSPCIG00000015513	RRP1B	57	51.707	ENSPPYG00000011474	RRP1	80	54.377	Pongo_abelii
ENSPCIG00000015513	RRP1B	85	80.000	ENSPCAG00000013723	RRP1B	91	80.000	Procavia_capensis
ENSPCIG00000015513	RRP1B	53	51.804	ENSPCOG00000017706	RRP1	84	50.773	Propithecus_coquereli
ENSPCIG00000015513	RRP1B	100	65.838	ENSPCOG00000017927	RRP1B	100	65.838	Propithecus_coquereli
ENSPCIG00000015513	RRP1B	99	57.273	ENSPVAG00000001436	RRP1B	99	57.217	Pteropus_vampyrus
ENSPCIG00000015513	RRP1B	69	57.500	ENSPNAG00000007718	-	69	45.312	Pygocentrus_nattereri
ENSPCIG00000015513	RRP1B	100	55.628	ENSRNOG00000001194	Rrp1b	100	55.222	Rattus_norvegicus
ENSPCIG00000015513	RRP1B	100	61.911	ENSRBIG00000041689	RRP1B	100	61.911	Rhinopithecus_bieti
ENSPCIG00000015513	RRP1B	57	51.834	ENSRROG00000039799	RRP1	80	54.377	Rhinopithecus_roxellana
ENSPCIG00000015513	RRP1B	100	65.969	ENSRROG00000031499	RRP1B	100	65.969	Rhinopithecus_roxellana
ENSPCIG00000015513	RRP1B	94	60.829	ENSSBOG00000034727	RRP1B	99	60.829	Saimiri_boliviensis_boliviensis
ENSPCIG00000015513	RRP1B	53	52.394	ENSSBOG00000034689	RRP1	81	52.660	Saimiri_boliviensis_boliviensis
ENSPCIG00000015513	RRP1B	100	92.913	ENSSHAG00000017789	RRP1B	100	92.913	Sarcophilus_harrisii
ENSPCIG00000015513	RRP1B	58	51.613	ENSSFOG00015003932	-	80	46.053	Scleropages_formosus
ENSPCIG00000015513	RRP1B	63	55.556	ENSSMAG00000016847	-	87	46.175	Scophthalmus_maximus
ENSPCIG00000015513	RRP1B	63	51.613	ENSSDUG00000000551	-	54	47.632	Seriola_dumerili
ENSPCIG00000015513	RRP1B	63	53.333	ENSSLDG00000002538	-	54	48.663	Seriola_lalandi_dorsalis
ENSPCIG00000015513	RRP1B	73	60.915	ENSSARG00000003108	-	74	60.915	Sorex_araneus
ENSPCIG00000015513	RRP1B	100	51.192	ENSSPUG00000002834	RRP1B	100	50.379	Sphenodon_punctatus
ENSPCIG00000015513	RRP1B	63	54.945	ENSSPAG00000005370	-	51	54.945	Stegastes_partitus
ENSPCIG00000015513	RRP1B	52	50.538	ENSSSCG00000037061	RRP1	77	53.602	Sus_scrofa
ENSPCIG00000015513	RRP1B	100	57.043	ENSSSCG00000021698	RRP1B	100	57.382	Sus_scrofa
ENSPCIG00000015513	RRP1B	70	61.538	ENSTNIG00000005053	rrp1	94	46.944	Tetraodon_nigroviridis
ENSPCIG00000015513	RRP1B	77	75.964	ENSTBEG00000000422	RRP1B	100	74.107	Tupaia_belangeri
ENSPCIG00000015513	RRP1B	100	59.739	ENSTTRG00000000723	RRP1B	100	59.869	Tursiops_truncatus
ENSPCIG00000015513	RRP1B	100	60.602	ENSUAMG00000026765	RRP1B	100	60.938	Ursus_americanus
ENSPCIG00000015513	RRP1B	59	88.750	ENSUMAG00000025510	RRP1B	81	88.750	Ursus_maritimus
ENSPCIG00000015513	RRP1B	94	62.188	ENSVVUG00000024509	RRP1B	99	61.911	Vulpes_vulpes
ENSPCIG00000015513	RRP1B	53	69.811	ENSXETG00000013683	rrp1b	57	69.811	Xenopus_tropicalis
ENSPCIG00000015513	RRP1B	88	45.758	ENSXMAG00000023123	-	100	36.218	Xiphophorus_maculatus