EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000015523 (Gene tree)
Gene ID: 110199156
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 33687 bases
Position: chrFUWB01002340.1:309075-342761
Accession: 110199156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000020386	Nop52	PF05997.12	1.3e-68	1	1
ENSPCIP00000020388	Nop52	PF05997.12	2.7e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000025146	-	2364	XM_020973890	ENSPCIP00000020388	679 (aa)	XP_020829549	-
ENSPCIT00000025144	-	2567	-	ENSPCIP00000020386	455 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000015523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000015523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000015523	-	82	57.623	ENSPCIG00000015513	RRP1B	84	44.753

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000015523	-	75	65.205	ENSG00000160214	RRP1	98	68.182	Homo_sapiens
ENSPCIG00000015523	-	80	53.887	ENSAMEG00000011401	RRP1B	59	49.184	Ailuropoda_melanoleuca
ENSPCIG00000015523	-	82	61.436	ENSAMEG00000011448	RRP1	87	59.241	Ailuropoda_melanoleuca
ENSPCIG00000015523	-	65	47.492	ENSACIG00000019121	rrp1	62	46.645	Amphilophus_citrinellus
ENSPCIG00000015523	-	75	48.538	ENSAOCG00000017894	-	76	48.696	Amphiprion_ocellaris
ENSPCIG00000015523	-	73	54.971	ENSAPLG00000004310	RRP1B	51	52.267	Anas_platyrhynchos
ENSPCIG00000015523	-	74	59.118	ENSACAG00000017851	RRP1B	52	53.027	Anolis_carolinensis
ENSPCIG00000015523	-	73	63.798	ENSANAG00000037815	RRP1	77	64.095	Aotus_nancymaae
ENSPCIG00000015523	-	82	57.743	ENSBTAG00000003981	RRP1	83	58.530	Bos_taurus
ENSPCIG00000015523	-	80	60.477	ENSCJAG00000043205	RRP1	80	60.101	Callithrix_jacchus
ENSPCIG00000015523	-	72	55.621	ENSCAFG00000010621	RRP1B	55	51.010	Canis_familiaris
ENSPCIG00000015523	-	82	60.417	ENSCAFG00000010646	RRP1	96	53.159	Canis_familiaris
ENSPCIG00000015523	-	82	60.417	ENSCAFG00020018979	RRP1	91	57.895	Canis_lupus_dingo
ENSPCIG00000015523	-	82	55.729	ENSCAFG00020018901	RRP1B	56	53.477	Canis_lupus_dingo
ENSPCIG00000015523	-	82	58.047	ENSCHIG00000020948	RRP1	98	52.088	Capra_hircus
ENSPCIG00000015523	-	86	56.416	ENSTSYG00000012831	RRP1	89	56.416	Carlito_syrichta
ENSPCIG00000015523	-	65	56.037	ENSCAPG00000008576	RRP1	84	54.762	Cavia_aperea
ENSPCIG00000015523	-	77	52.958	ENSCPOG00000002396	RRP1B	63	45.279	Cavia_porcellus
ENSPCIG00000015523	-	76	60.955	ENSCPOG00000038986	RRP1	98	51.288	Cavia_porcellus
ENSPCIG00000015523	-	83	54.286	ENSCCAG00000029384	RRP1B	64	50.233	Cebus_capucinus
ENSPCIG00000015523	-	91	57.243	ENSCCAG00000029828	RRP1	99	53.586	Cebus_capucinus
ENSPCIG00000015523	-	75	65.103	ENSCATG00000015632	RRP1	85	60.000	Cercocebus_atys
ENSPCIG00000015523	-	76	60.399	ENSCLAG00000011639	RRP1	77	60.399	Chinchilla_lanigera
ENSPCIG00000015523	-	74	59.763	ENSCSAG00000007961	RRP1B	56	51.395	Chlorocebus_sabaeus
ENSPCIG00000015523	-	71	65.741	ENSCSAG00000007936	RRP1	100	65.046	Chlorocebus_sabaeus
ENSPCIG00000015523	-	83	44.500	ENSCHOG00000002426	-	65	44.500	Choloepus_hoffmanni
ENSPCIG00000015523	-	74	62.899	ENSCPBG00000010310	RRP1B	68	47.140	Chrysemys_picta_bellii
ENSPCIG00000015523	-	73	36.364	ENSCING00000003304	-	73	36.364	Ciona_intestinalis
ENSPCIG00000015523	-	62	64.437	ENSCANG00000042611	RRP1	67	64.437	Colobus_angolensis_palliatus
ENSPCIG00000015523	-	74	59.763	ENSCANG00000040952	RRP1B	56	51.389	Colobus_angolensis_palliatus
ENSPCIG00000015523	-	74	58.529	ENSCGRG00001023882	-	62	68.056	Cricetulus_griseus_chok1gshd
ENSPCIG00000015523	-	87	56.479	ENSCGRG00001011920	Rrp1	91	56.479	Cricetulus_griseus_chok1gshd
ENSPCIG00000015523	-	74	58.651	ENSCGRG00001010889	-	61	48.945	Cricetulus_griseus_chok1gshd
ENSPCIG00000015523	-	64	59.060	ENSCGRG00000001553	Rrp1b	57	48.157	Cricetulus_griseus_crigri
ENSPCIG00000015523	-	87	56.479	ENSCGRG00000008915	Rrp1	91	56.479	Cricetulus_griseus_crigri
ENSPCIG00000015523	-	76	47.458	ENSCSEG00000020711	-	64	48.415	Cynoglossus_semilaevis
ENSPCIG00000015523	-	77	44.847	ENSCVAG00000017568	-	90	45.658	Cyprinodon_variegatus
ENSPCIG00000015523	-	73	47.892	ENSDARG00000103337	rrp1	59	40.781	Danio_rerio
ENSPCIG00000015523	-	89	57.212	ENSDNOG00000019880	RRP1	87	57.212	Dasypus_novemcinctus
ENSPCIG00000015523	-	82	55.614	ENSDNOG00000032774	RRP1B	59	50.216	Dasypus_novemcinctus
ENSPCIG00000015523	-	66	60.323	ENSDORG00000002104	Rrp1	88	54.032	Dipodomys_ordii
ENSPCIG00000015523	-	69	51.242	ENSDORG00000005496	Rrp1b	52	47.258	Dipodomys_ordii
ENSPCIG00000015523	-	72	54.434	ENSETEG00000002963	-	73	54.103	Echinops_telfairi
ENSPCIG00000015523	-	80	58.961	ENSEASG00005001673	RRP1	99	54.767	Equus_asinus_asinus
ENSPCIG00000015523	-	75	57.550	ENSEASG00005001687	RRP1B	56	51.270	Equus_asinus_asinus
ENSPCIG00000015523	-	80	58.961	ENSECAG00000015703	RRP1	99	54.767	Equus_caballus
ENSPCIG00000015523	-	75	57.550	ENSECAG00000018018	RRP1B	56	51.270	Equus_caballus
ENSPCIG00000015523	-	76	45.789	ENSELUG00000015885	-	88	46.201	Esox_lucius
ENSPCIG00000015523	-	83	61.458	ENSFCAG00000008434	RRP1	84	61.780	Felis_catus
ENSPCIG00000015523	-	61	62.898	ENSFALG00000002024	RRP1B	50	55.587	Ficedula_albicollis
ENSPCIG00000015523	-	87	54.433	ENSFDAG00000013728	RRP1	89	54.433	Fukomys_damarensis
ENSPCIG00000015523	-	67	52.303	ENSFDAG00000010899	RRP1B	57	43.632	Fukomys_damarensis
ENSPCIG00000015523	-	75	45.614	ENSGMOG00000001953	-	50	44.898	Gadus_morhua
ENSPCIG00000015523	-	83	56.218	ENSGALG00000035696	RRP1B	55	52.494	Gallus_gallus
ENSPCIG00000015523	-	75	48.830	ENSGACG00000001438	rrp1	53	48.830	Gasterosteus_aculeatus
ENSPCIG00000015523	-	76	63.112	ENSGAGG00000000375	RRP1B	71	48.174	Gopherus_agassizii
ENSPCIG00000015523	-	75	65.205	ENSGGOG00000000173	RRP1	88	58.432	Gorilla_gorilla
ENSPCIG00000015523	-	76	61.739	ENSHGLG00000017085	RRP1	79	59.030	Heterocephalus_glaber_female
ENSPCIG00000015523	-	72	55.488	ENSHGLG00000004968	RRP1B	70	43.830	Heterocephalus_glaber_female
ENSPCIG00000015523	-	79	40.952	ENSHCOG00000018388	-	56	37.205	Hippocampus_comes
ENSPCIG00000015523	-	75	47.339	ENSIPUG00000000673	-	68	47.899	Ictalurus_punctatus
ENSPCIG00000015523	-	76	63.689	ENSSTOG00000011116	RRP1	81	62.396	Ictidomys_tridecemlineatus
ENSPCIG00000015523	-	74	58.284	ENSSTOG00000011790	RRP1B	59	50.926	Ictidomys_tridecemlineatus
ENSPCIG00000015523	-	76	61.739	ENSJJAG00000018886	Rrp1	82	59.890	Jaculus_jaculus
ENSPCIG00000015523	-	74	51.989	ENSJJAG00000021279	Rrp1b	54	48.889	Jaculus_jaculus
ENSPCIG00000015523	-	72	48.116	ENSKMAG00000005539	rrp1	64	44.165	Kryptolebias_marmoratus
ENSPCIG00000015523	-	75	44.167	ENSLBEG00000021417	RRP1	90	44.722	Labrus_bergylta
ENSPCIG00000015523	-	81	50.904	ENSLACG00000017332	-	52	51.163	Latimeria_chalumnae
ENSPCIG00000015523	-	73	53.614	ENSLOCG00000004064	-	60	46.330	Lepisosteus_oculatus
ENSPCIG00000015523	-	82	59.948	ENSLAFG00000022901	RRP1	86	59.948	Loxodonta_africana
ENSPCIG00000015523	-	82	56.085	ENSLAFG00000000766	RRP1B	87	56.085	Loxodonta_africana
ENSPCIG00000015523	-	74	59.763	ENSMFAG00000039152	RRP1B	56	51.395	Macaca_fascicularis
ENSPCIG00000015523	-	75	65.103	ENSMFAG00000003202	RRP1	84	60.253	Macaca_fascicularis
ENSPCIG00000015523	-	75	65.396	ENSMMUG00000012304	RRP1	84	60.506	Macaca_mulatta
ENSPCIG00000015523	-	74	60.059	ENSMMUG00000000104	RRP1B	57	51.620	Macaca_mulatta
ENSPCIG00000015523	-	85	59.494	ENSMNEG00000031210	RRP1	84	60.506	Macaca_nemestrina
ENSPCIG00000015523	-	74	60.059	ENSMNEG00000034269	RRP1B	56	51.628	Macaca_nemestrina
ENSPCIG00000015523	-	64	59.864	ENSMLEG00000040044	RRP1B	53	50.515	Mandrillus_leucophaeus
ENSPCIG00000015523	-	77	58.101	ENSMLEG00000037797	RRP1	83	59.218	Mandrillus_leucophaeus
ENSPCIG00000015523	-	83	55.959	ENSMGAG00000014591	RRP1B	55	53.302	Meleagris_gallopavo
ENSPCIG00000015523	-	86	46.455	ENSMAUG00000017653	Rrp1	92	46.429	Mesocricetus_auratus
ENSPCIG00000015523	-	88	58.252	ENSMICG00000004700	RRP1	93	57.794	Microcebus_murinus
ENSPCIG00000015523	-	74	60.882	ENSMICG00000004686	RRP1B	57	53.919	Microcebus_murinus
ENSPCIG00000015523	-	76	50.000	ENSMOCG00000015687	Rrp1	94	45.934	Microtus_ochrogaster
ENSPCIG00000015523	-	81	50.923	ENSMOCG00000001117	Rrp1b	62	45.322	Microtus_ochrogaster
ENSPCIG00000015523	-	75	42.651	ENSMMOG00000019175	rrp1	88	43.966	Mola_mola
ENSPCIG00000015523	-	100	64.286	ENSMODG00000021036	-	100	64.286	Monodelphis_domestica
ENSPCIG00000015523	-	76	60.694	ENSMODG00000021033	RRP1B	79	44.290	Monodelphis_domestica
ENSPCIG00000015523	-	75	48.696	ENSMALG00000010310	rrp1	89	48.696	Monopterus_albus
ENSPCIG00000015523	-	72	53.801	MGP_CAROLIEiJ_G0021376	Rrp1b	54	68.750	Mus_caroli
ENSPCIG00000015523	-	68	62.992	MGP_CAROLIEiJ_G0015508	Rrp1	73	64.257	Mus_caroli
ENSPCIG00000015523	-	72	56.548	ENSMUSG00000058392	Rrp1b	54	70.312	Mus_musculus
ENSPCIG00000015523	-	68	62.992	ENSMUSG00000061032	Rrp1	93	49.237	Mus_musculus
ENSPCIG00000015523	-	77	66.393	MGP_PahariEiJ_G0030921	Rrp1	72	66.393	Mus_pahari
ENSPCIG00000015523	-	74	55.814	MGP_PahariEiJ_G0023695	Rrp1b	60	66.667	Mus_pahari
ENSPCIG00000015523	-	68	62.992	MGP_SPRETEiJ_G0016321	Rrp1	93	48.690	Mus_spretus
ENSPCIG00000015523	-	72	56.433	MGP_SPRETEiJ_G0022290	Rrp1b	54	70.312	Mus_spretus
ENSPCIG00000015523	-	85	53.604	ENSMPUG00000009826	RRP1	93	53.422	Mustela_putorius_furo
ENSPCIG00000015523	-	68	51.875	ENSMPUG00000009810	RRP1B	59	47.696	Mustela_putorius_furo
ENSPCIG00000015523	-	77	75.109	ENSMLUG00000017788	RRP1	92	50.533	Myotis_lucifugus
ENSPCIG00000015523	-	81	52.381	ENSNGAG00000021073	Rrp1b	55	48.946	Nannospalax_galili
ENSPCIG00000015523	-	76	44.444	ENSNGAG00000022344	Rrp1	96	42.457	Nannospalax_galili
ENSPCIG00000015523	-	75	64.620	ENSNLEG00000034734	RRP1	87	58.513	Nomascus_leucogenys
ENSPCIG00000015523	-	78	53.501	ENSOPRG00000001319	RRP1	98	53.782	Ochotona_princeps
ENSPCIG00000015523	-	67	45.928	ENSONIG00000004264	rrp1	57	39.277	Oreochromis_niloticus
ENSPCIG00000015523	-	74	57.895	ENSOANG00000006470	RRP1B	54	52.983	Ornithorhynchus_anatinus
ENSPCIG00000015523	-	73	69.697	ENSOANG00000006472	-	94	64.075	Ornithorhynchus_anatinus
ENSPCIG00000015523	-	69	48.101	ENSOCUG00000025931	RRP1B	57	41.422	Oryctolagus_cuniculus
ENSPCIG00000015523	-	73	59.036	ENSOGAG00000009872	RRP1B	51	59.036	Otolemur_garnettii
ENSPCIG00000015523	-	82	61.299	ENSOGAG00000006105	RRP1	97	57.437	Otolemur_garnettii
ENSPCIG00000015523	-	72	61.562	ENSOARG00000011434	RRP1	74	62.090	Ovis_aries
ENSPCIG00000015523	-	75	65.205	ENSPPAG00000029050	RRP1	88	58.195	Pan_paniscus
ENSPCIG00000015523	-	80	61.957	ENSPPRG00000010656	RRP1	82	62.162	Panthera_pardus
ENSPCIG00000015523	-	77	51.977	ENSPTIG00000019473	RRP1	83	50.267	Panthera_tigris_altaica
ENSPCIG00000015523	-	75	64.912	ENSPTRG00000013962	RRP1	88	58.195	Pan_troglodytes
ENSPCIG00000015523	-	74	60.059	ENSPANG00000011090	RRP1B	56	51.628	Papio_anubis
ENSPCIG00000015523	-	85	59.494	ENSPANG00000015097	RRP1	84	59.494	Papio_anubis
ENSPCIG00000015523	-	77	45.055	ENSPKIG00000003422	-	55	41.758	Paramormyrops_kingsleyae
ENSPCIG00000015523	-	74	63.205	ENSPSIG00000008152	RRP1B	68	47.332	Pelodiscus_sinensis
ENSPCIG00000015523	-	75	38.244	ENSPMGG00000007512	-	89	38.315	Periophthalmus_magnuspinnatus
ENSPCIG00000015523	-	74	55.132	ENSPEMG00000022490	Rrp1b	51	51.562	Peromyscus_maniculatus_bairdii
ENSPCIG00000015523	-	86	52.058	ENSPEMG00000018421	Rrp1	90	55.831	Peromyscus_maniculatus_bairdii
ENSPCIG00000015523	-	85	59.091	ENSPPYG00000011474	RRP1	82	62.169	Pongo_abelii
ENSPCIG00000015523	-	51	64.378	ENSPCAG00000008370	-	76	59.075	Procavia_capensis
ENSPCIG00000015523	-	80	60.052	ENSPCOG00000017706	RRP1	83	60.052	Propithecus_coquereli
ENSPCIG00000015523	-	74	60.882	ENSPCOG00000017927	RRP1B	62	50.746	Propithecus_coquereli
ENSPCIG00000015523	-	67	49.286	ENSPVAG00000009925	-	70	49.286	Pteropus_vampyrus
ENSPCIG00000015523	-	74	55.882	ENSRNOG00000001194	Rrp1b	57	48.853	Rattus_norvegicus
ENSPCIG00000015523	-	76	57.865	ENSRNOG00000001203	Rrp1	91	54.197	Rattus_norvegicus
ENSPCIG00000015523	-	85	60.506	ENSRBIG00000032082	RRP1	87	59.277	Rhinopithecus_bieti
ENSPCIG00000015523	-	72	53.636	ENSRBIG00000041689	RRP1B	55	45.814	Rhinopithecus_bieti
ENSPCIG00000015523	-	74	60.059	ENSRROG00000031499	RRP1B	61	51.620	Rhinopithecus_roxellana
ENSPCIG00000015523	-	85	59.747	ENSRROG00000039799	RRP1	84	60.759	Rhinopithecus_roxellana
ENSPCIG00000015523	-	64	54.517	ENSSBOG00000034727	RRP1B	54	46.845	Saimiri_boliviensis_boliviensis
ENSPCIG00000015523	-	82	61.640	ENSSBOG00000034689	RRP1	83	61.640	Saimiri_boliviensis_boliviensis
ENSPCIG00000015523	-	71	89.846	ENSSHAG00000010304	-	100	89.846	Sarcophilus_harrisii
ENSPCIG00000015523	-	82	56.883	ENSSHAG00000017789	RRP1B	79	45.101	Sarcophilus_harrisii
ENSPCIG00000015523	-	69	45.614	ENSSFOG00015003932	-	63	41.205	Scleropages_formosus
ENSPCIG00000015523	-	75	48.295	ENSSMAG00000016847	-	80	50.000	Scophthalmus_maximus
ENSPCIG00000015523	-	75	54.701	ENSSPUG00000002834	RRP1B	54	50.000	Sphenodon_punctatus
ENSPCIG00000015523	-	77	61.714	ENSSSCG00000037061	RRP1	91	54.940	Sus_scrofa
ENSPCIG00000015523	-	75	55.523	ENSSSCG00000021698	RRP1B	62	49.758	Sus_scrofa
ENSPCIG00000015523	-	65	61.589	ENSTGUG00000005926	RRP1B	69	46.792	Taeniopygia_guttata
ENSPCIG00000015523	-	75	49.284	ENSTRUG00000017592	rrp1	98	49.284	Takifugu_rubripes
ENSPCIG00000015523	-	75	48.138	ENSTNIG00000005053	rrp1	55	50.145	Tetraodon_nigroviridis
ENSPCIG00000015523	-	60	61.745	ENSTBEG00000001260	-	59	61.745	Tupaia_belangeri
ENSPCIG00000015523	-	64	59.322	ENSTBEG00000000422	RRP1B	51	59.322	Tupaia_belangeri
ENSPCIG00000015523	-	64	62.745	ENSTTRG00000011162	RRP1	65	62.745	Tursiops_truncatus
ENSPCIG00000015523	-	55	54.724	ENSUAMG00000014189	-	96	46.154	Ursus_americanus
ENSPCIG00000015523	-	82	55.497	ENSUAMG00000026765	RRP1B	67	48.922	Ursus_americanus
ENSPCIG00000015523	-	72	54.599	ENSUMAG00000025510	RRP1B	65	54.599	Ursus_maritimus
ENSPCIG00000015523	-	74	59.763	ENSUMAG00000025507	RRP1	86	56.845	Ursus_maritimus
ENSPCIG00000015523	-	51	50.826	ENSVVUG00000024498	-	68	47.636	Vulpes_vulpes
ENSPCIG00000015523	-	72	54.867	ENSVVUG00000024509	RRP1B	59	48.706	Vulpes_vulpes
ENSPCIG00000015523	-	72	51.220	ENSXETG00000013683	rrp1b	51	52.134	Xenopus_tropicalis