EuRBPDB

Description
Ensembl ID
ENSPCIG00000015656 (Gene tree)
Gene ID
110217532
Gene Symbol
CMSS1
Alias
-
Full Name
cms1 ribosomal small subunit homolog
Gene Type
protein_coding
Species
Phascolarctos_cinereus
Status
putative
Strand
Plus strand
Length
125838 bases
Position
chrFUWB01002350.1:43915-169752
Accession
110217532
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSPCIP00000020578CMS1PF14617.61.2e-3211
ENSPCIP00000020582CMS1PF14617.61.2e-3211
ENSPCIP00000020580CMS1PF14617.61.3e-3211
ENSPCIP00000020576CMS1PF14617.61.6e-3211
ENSPCIP00000020578DEADPF00270.295.1e-0711
ENSPCIP00000020580DEADPF00270.295.2e-0711
ENSPCIP00000020582DEADPF00270.295.3e-0711
ENSPCIP00000020576DEADPF00270.296.2e-0711
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSPCIT00000025377CMSS1-2011282-ENSPCIP00000020576289 (aa)XP_020855597UPI000A2862D9
ENSPCIT00000025379CMSS1-2021576-ENSPCIP00000020578264 (aa)XP_020855600UPI000A28C231
ENSPCIT00000025381CMSS1-2031046XM_020999943ENSPCIP00000020580266 (aa)XP_020855602-
ENSPCIT00000025383CMSS1-2041443-ENSPCIP00000020582268 (aa)XP_020855599UPI000A281C81
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSPCIG00000015656CMSS110072.348ENSG00000184220CMSS19979.012Homo_sapiens
ENSPCIG00000015656CMSS17763.861ENSAPOG00000010604cmss19757.551Acanthochromis_polyacanthus
ENSPCIG00000015656CMSS19475.806ENSAMEG00000004092CMSS19675.806Ailuropoda_melanoleuca
ENSPCIG00000015656CMSS17753.465ENSACIG00000021854cmss19150.413Amphilophus_citrinellus
ENSPCIG00000015656CMSS17762.871ENSAOCG00000013361cmss19653.261Amphiprion_ocellaris
ENSPCIG00000015656CMSS17762.871ENSAPEG00000005829cmss19653.957Amphiprion_percula
ENSPCIG00000015656CMSS17863.107ENSATEG00000008209cmss19854.074Anabas_testudineus
ENSPCIG00000015656CMSS18773.478ENSAPLG00000010542CMSS110073.478Anas_platyrhynchos
ENSPCIG00000015656CMSS19969.030ENSACAG00000011065CMSS19968.266Anolis_carolinensis
ENSPCIG00000015656CMSS19974.144ENSANAG00000023565CMSS19974.427Aotus_nancymaae
ENSPCIG00000015656CMSS17761.386ENSACLG00000027294cmss18356.198Astatotilapia_calliptera
ENSPCIG00000015656CMSS17654.500ENSAMXG00000002046cmss19647.163Astyanax_mexicanus
ENSPCIG00000015656CMSS19475.304ENSBTAG00000013663CMSS19075.000Bos_taurus
ENSPCIG00000015656CMSS110073.106ENSCJAG00000000610CMSS19973.664Callithrix_jacchus
ENSPCIG00000015656CMSS19476.923ENSCAFG00000009230CMSS19672.727Canis_familiaris
ENSPCIG00000015656CMSS19874.615ENSCAFG00020009464-9474.615Canis_lupus_dingo
ENSPCIG00000015656CMSS19268.163ENSCAFG00020024156-7668.163Canis_lupus_dingo
ENSPCIG00000015656CMSS19872.308ENSCHIG00000013003CMSS19372.308Capra_hircus
ENSPCIG00000015656CMSS19872.481ENSTSYG00000009266CMSS19972.481Carlito_syrichta
ENSPCIG00000015656CMSS18460.538ENSCAPG00000013584CMSS18767.204Cavia_aperea
ENSPCIG00000015656CMSS19770.769ENSCPOG00000014680CMSS18972.581Cavia_porcellus
ENSPCIG00000015656CMSS19875.769ENSCCAG00000034685CMSS19975.191Cebus_capucinus
ENSPCIG00000015656CMSS110071.970ENSCATG00000031980CMSS110071.970Cercocebus_atys
ENSPCIG00000015656CMSS18777.729ENSCLAG00000011241CMSS19877.729Chinchilla_lanigera
ENSPCIG00000015656CMSS19375.510ENSCSAG00000006024CMSS110075.510Chlorocebus_sabaeus
ENSPCIG00000015656CMSS19955.805ENSCHOG00000012098CMSS19058.871Choloepus_hoffmanni
ENSPCIG00000015656CMSS17243.005ENSCING00000014848-9444.886Ciona_intestinalis
ENSPCIG00000015656CMSS19971.805ENSCANG00000031337CMSS19575.304Colobus_angolensis_palliatus
ENSPCIG00000015656CMSS19870.930ENSCGRG00001014305Cmss19270.930Cricetulus_griseus_chok1gshd
ENSPCIG00000015656CMSS19870.543ENSCGRG00000006722Cmss19970.543Cricetulus_griseus_crigri
ENSPCIG00000015656CMSS17763.861ENSCSEG00000004958cmss16963.861Cynoglossus_semilaevis
ENSPCIG00000015656CMSS17763.366ENSCVAG00000005039cmss17063.366Cyprinodon_variegatus
ENSPCIG00000015656CMSS19148.092ENSDARG00000112579cmss19648.070Danio_rerio
ENSPCIG00000015656CMSS19972.624ENSDNOG00000040418CMSS19272.624Dasypus_novemcinctus
ENSPCIG00000015656CMSS19975.573ENSDORG00000010461Cmss19275.096Dipodomys_ordii
ENSPCIG00000015656CMSS15053.788ENSEBUG00000002156-9653.788Eptatretus_burgeri
ENSPCIG00000015656CMSS18776.856ENSEASG00005010966CMSS110077.273Equus_asinus_asinus
ENSPCIG00000015656CMSS110070.677ENSECAG00000015662CMSS19976.106Equus_caballus
ENSPCIG00000015656CMSS18654.386ENSEEUG00000007624-8255.022Erinaceus_europaeus
ENSPCIG00000015656CMSS19156.017ENSELUG00000019459cmss18056.017Esox_lucius
ENSPCIG00000015656CMSS19876.154ENSFCAG00000044577CMSS19276.154Felis_catus
ENSPCIG00000015656CMSS19169.038ENSFALG00000005816CMSS110069.038Ficedula_albicollis
ENSPCIG00000015656CMSS18675.877ENSFDAG00000012577CMSS110075.877Fukomys_damarensis
ENSPCIG00000015656CMSS18657.759ENSFHEG00000012008cmss19558.009Fundulus_heteroclitus
ENSPCIG00000015656CMSS18361.009ENSGMOG00000016729cmss19653.818Gadus_morhua
ENSPCIG00000015656CMSS110067.424ENSGALG00000015267CMSS110067.939Gallus_gallus
ENSPCIG00000015656CMSS17862.319ENSGAFG00000021217cmss17762.376Gambusia_affinis
ENSPCIG00000015656CMSS17757.426ENSGACG00000002798cmss19749.632Gasterosteus_aculeatus
ENSPCIG00000015656CMSS110068.797ENSGAGG00000019861CMSS110068.797Gopherus_agassizii
ENSPCIG00000015656CMSS110072.348ENSGGOG00000014125CMSS110072.348Gorilla_gorilla
ENSPCIG00000015656CMSS17761.386ENSHBUG00000008431cmss19951.418Haplochromis_burtoni
ENSPCIG00000015656CMSS19373.171ENSHGLG00000019481CMSS19872.874Heterocephalus_glaber_female
ENSPCIG00000015656CMSS19373.171ENSHGLG00100010314CMSS19672.874Heterocephalus_glaber_male
ENSPCIG00000015656CMSS17765.842ENSHCOG00000003222cmss18060.759Hippocampus_comes
ENSPCIG00000015656CMSS17757.426ENSIPUG00000011591cmss17057.426Ictalurus_punctatus
ENSPCIG00000015656CMSS19973.664ENSSTOG00000019366CMSS19273.664Ictidomys_tridecemlineatus
ENSPCIG00000015656CMSS19871.923ENSJJAG00000014894Cmss19376.056Jaculus_jaculus
ENSPCIG00000015656CMSS17754.950ENSKMAG00000002390cmss18154.950Kryptolebias_marmoratus
ENSPCIG00000015656CMSS17758.128ENSLBEG00000006298cmss19753.086Labrus_bergylta
ENSPCIG00000015656CMSS18667.391ENSLACG00000009293CMSS110067.391Latimeria_chalumnae
ENSPCIG00000015656CMSS18856.897ENSLOCG00000009391cmss18455.882Lepisosteus_oculatus
ENSPCIG00000015656CMSS18677.632ENSLAFG00000017509CMSS110077.632Loxodonta_africana
ENSPCIG00000015656CMSS110072.348ENSMFAG00000045006CMSS110072.348Macaca_fascicularis
ENSPCIG00000015656CMSS110071.970ENSMMUG00000002939CMSS19877.273Macaca_mulatta
ENSPCIG00000015656CMSS110072.348ENSMNEG00000031315CMSS110072.348Macaca_nemestrina
ENSPCIG00000015656CMSS110071.591ENSMLEG00000033660CMSS110071.591Mandrillus_leucophaeus
ENSPCIG00000015656CMSS17763.861ENSMAMG00000017176cmss19654.152Mastacembelus_armatus
ENSPCIG00000015656CMSS17761.386ENSMZEG00005021886cmss18356.198Maylandia_zebra
ENSPCIG00000015656CMSS18673.246ENSMGAG00000014360CMSS110073.246Meleagris_gallopavo
ENSPCIG00000015656CMSS19451.613ENSMAUG00000020609Cmss18753.629Mesocricetus_auratus
ENSPCIG00000015656CMSS19872.868ENSMICG00000048977CMSS19972.868Microcebus_murinus
ENSPCIG00000015656CMSS19771.875ENSMOCG00000021937Cmss19171.875Microtus_ochrogaster
ENSPCIG00000015656CMSS17761.386ENSMMOG00000019794cmss18461.386Mola_mola
ENSPCIG00000015656CMSS19886.923ENSMODG00000002275CMSS19886.312Monodelphis_domestica
ENSPCIG00000015656CMSS18861.017ENSMALG00000004250cmss19652.203Monopterus_albus
ENSPCIG00000015656CMSS19472.581MGP_CAROLIEiJ_G0020824Cmss18972.289Mus_caroli
ENSPCIG00000015656CMSS19472.984ENSMUSG00000022748Cmss18972.691Mus_musculus
ENSPCIG00000015656CMSS19871.264MGP_PahariEiJ_G0016524Cmss19271.264Mus_pahari
ENSPCIG00000015656CMSS19473.387MGP_SPRETEiJ_G0021724Cmss18973.092Mus_spretus
ENSPCIG00000015656CMSS19277.869ENSMPUG00000011324CMSS19477.869Mustela_putorius_furo
ENSPCIG00000015656CMSS110072.556ENSMLUG00000001131CMSS110072.556Myotis_lucifugus
ENSPCIG00000015656CMSS110070.833ENSNGAG00000020316Cmss19271.923Nannospalax_galili
ENSPCIG00000015656CMSS17761.386ENSNBRG00000003095cmss18356.612Neolamprologus_brichardi
ENSPCIG00000015656CMSS110073.485ENSNLEG00000034172CMSS110073.485Nomascus_leucogenys
ENSPCIG00000015656CMSS18683.772ENSMEUG00000014505CMSS110083.772Notamacropus_eugenii
ENSPCIG00000015656CMSS19476.113ENSOPRG00000002986CMSS18976.113Ochotona_princeps
ENSPCIG00000015656CMSS18972.650ENSODEG00000003558-8672.650Octodon_degus
ENSPCIG00000015656CMSS19859.542ENSODEG00000001853-9359.542Octodon_degus
ENSPCIG00000015656CMSS19969.847ENSODEG00000005226-9269.847Octodon_degus
ENSPCIG00000015656CMSS19460.729ENSODEG00000009446-9760.729Octodon_degus
ENSPCIG00000015656CMSS17761.881ENSONIG00000006678cmss19356.612Oreochromis_niloticus
ENSPCIG00000015656CMSS19877.308ENSOANG00000007529CMSS110079.828Ornithorhynchus_anatinus
ENSPCIG00000015656CMSS19874.231ENSOCUG00000025366CMSS19771.739Oryctolagus_cuniculus
ENSPCIG00000015656CMSS19458.468ENSORLG00000020340cmss19555.720Oryzias_latipes
ENSPCIG00000015656CMSS18754.585ENSORLG00020012235cmss19954.077Oryzias_latipes_hni
ENSPCIG00000015656CMSS17758.416ENSORLG00015015551cmss17558.416Oryzias_latipes_hsok
ENSPCIG00000015656CMSS17765.842ENSOMEG00000012555cmss19554.909Oryzias_melastigma
ENSPCIG00000015656CMSS18676.754ENSOGAG00000002045CMSS110076.754Otolemur_garnettii
ENSPCIG00000015656CMSS19972.180ENSOARG00000017899CMSS19071.429Ovis_aries
ENSPCIG00000015656CMSS110073.106ENSPPAG00000038515CMSS19473.846Pan_paniscus
ENSPCIG00000015656CMSS19875.769ENSPPRG00000016767CMSS19275.769Panthera_pardus
ENSPCIG00000015656CMSS19875.769ENSPTIG00000018274CMSS18978.226Panthera_tigris_altaica
ENSPCIG00000015656CMSS110072.348ENSPTRG00000015157CMSS110075.510Pan_troglodytes
ENSPCIG00000015656CMSS110070.455ENSPANG00000019980CMSS19573.684Papio_anubis
ENSPCIG00000015656CMSS18663.043ENSPKIG00000012609cmss19261.044Paramormyrops_kingsleyae
ENSPCIG00000015656CMSS18775.983ENSPSIG00000003849CMSS110075.983Pelodiscus_sinensis
ENSPCIG00000015656CMSS17763.054ENSPMGG00000010286cmss18763.054Periophthalmus_magnuspinnatus
ENSPCIG00000015656CMSS19871.538ENSPEMG00000016384Cmss19171.538Peromyscus_maniculatus_bairdii
ENSPCIG00000015656CMSS17755.882ENSPMAG00000001146cmss19956.436Petromyzon_marinus
ENSPCIG00000015656CMSS17762.376ENSPFOG00000016849cmss17162.376Poecilia_formosa
ENSPCIG00000015656CMSS17761.881ENSPLAG00000008323cmss17161.881Poecilia_latipinna
ENSPCIG00000015656CMSS17762.376ENSPMEG00000021020cmss17062.376Poecilia_mexicana
ENSPCIG00000015656CMSS19355.777ENSPREG00000007618cmss16961.881Poecilia_reticulata
ENSPCIG00000015656CMSS110072.180ENSPPYG00000013606CMSS19672.180Pongo_abelii
ENSPCIG00000015656CMSS19873.256ENSPCOG00000020035CMSS19973.256Propithecus_coquereli
ENSPCIG00000015656CMSS19865.385ENSPVAG00000017031CMSS19365.385Pteropus_vampyrus
ENSPCIG00000015656CMSS16765.341ENSPNYG00000013428cmss17958.796Pundamilia_nyererei
ENSPCIG00000015656CMSS18852.743ENSPNAG00000007912cmss18153.586Pygocentrus_nattereri
ENSPCIG00000015656CMSS19969.697ENSRNOG00000027888Cmss110069.697Rattus_norvegicus
ENSPCIG00000015656CMSS19474.494ENSRBIG00000037931CMSS19574.494Rhinopithecus_bieti
ENSPCIG00000015656CMSS19474.494ENSRROG00000042910CMSS19574.494Rhinopithecus_roxellana
ENSPCIG00000015656CMSS19974.046ENSSBOG00000030980CMSS19974.046Saimiri_boliviensis_boliviensis
ENSPCIG00000015656CMSS19490.119ENSSHAG00000009321CMSS110090.119Sarcophilus_harrisii
ENSPCIG00000015656CMSS18662.174ENSSFOG00015001509cmss19355.762Scleropages_formosus
ENSPCIG00000015656CMSS17762.871ENSSMAG00000001653cmss16962.871Scophthalmus_maximus
ENSPCIG00000015656CMSS17764.356ENSSDUG00000007719cmss18260.169Seriola_dumerili
ENSPCIG00000015656CMSS17864.251ENSSLDG00000012300cmss17860.963Seriola_lalandi_dorsalis
ENSPCIG00000015656CMSS19466.935ENSSARG00000003584CMSS18966.935Sorex_araneus
ENSPCIG00000015656CMSS18675.664ENSSPUG00000003865CMSS110075.664Sphenodon_punctatus
ENSPCIG00000015656CMSS17864.078ENSSPAG00000019182cmss16364.356Stegastes_partitus
ENSPCIG00000015656CMSS19774.231ENSSSCG00000011970CMSS18976.923Sus_scrofa
ENSPCIG00000015656CMSS18769.869ENSTGUG00000013635CMSS110069.869Taeniopygia_guttata
ENSPCIG00000015656CMSS17762.376ENSTRUG00000015265cmss19752.381Takifugu_rubripes
ENSPCIG00000015656CMSS17758.416ENSTNIG00000002880cmss19650.373Tetraodon_nigroviridis
ENSPCIG00000015656CMSS18656.579ENSTBEG00000016722CMSS18156.579Tupaia_belangeri
ENSPCIG00000015656CMSS19373.984ENSTTRG00000001562CMSS18873.984Tursiops_truncatus
ENSPCIG00000015656CMSS19874.615ENSUAMG00000024209CMSS110078.475Ursus_americanus
ENSPCIG00000015656CMSS19476.923ENSUMAG00000001983CMSS19576.923Ursus_maritimus
ENSPCIG00000015656CMSS18663.596ENSVPAG00000000263CMSS15781.875Vicugna_pacos
ENSPCIG00000015656CMSS19376.829ENSVVUG00000021647-10076.829Vulpes_vulpes
ENSPCIG00000015656CMSS17779.703ENSVVUG00000007776-8079.703Vulpes_vulpes
ENSPCIG00000015656CMSS18864.378ENSXETG00000011858cmss18364.378Xenopus_tropicalis
ENSPCIG00000015656CMSS17962.500ENSXCOG00000018724cmss16962.871Xiphophorus_couchianus
ENSPCIG00000015656CMSS17962.500ENSXMAG00000011243cmss17662.871Xiphophorus_maculatus