EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000016007 (Gene tree)
Gene ID: 110201961
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 37313 bases
Position: chrFUWB01005132.1:24205-61517
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000021058	MMR_HSR1	PF01926.23	1.3e-08	1	1
ENSPCIP00000021057	MMR_HSR1	PF01926.23	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000025988	-	1269	-	ENSPCIP00000021057	361 (aa)	-	-
ENSPCIT00000025989	-	1868	-	ENSPCIP00000021058	332 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000016007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000016007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000016007	-	99	74.622	ENSPCIG00000026520	-	97	72.493
ENSPCIG00000016007	-	86	82.394	ENSPCIG00000026522	-	89	82.394
ENSPCIG00000016007	-	83	38.870	ENSPCIG00000016010	-	93	39.032
ENSPCIG00000016007	-	66	44.091	ENSPCIG00000002948	-	73	44.091
ENSPCIG00000016007	-	70	39.914	ENSPCIG00000008658	-	73	39.914
ENSPCIG00000016007	-	58	45.078	ENSPCIG00000001766	-	68	45.078

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000016007	-	98	50.765	ENSG00000133574	GIMAP4	99	55.629	Homo_sapiens
ENSPCIG00000016007	-	93	55.663	ENSAMEG00000019779	-	96	55.663	Ailuropoda_melanoleuca
ENSPCIG00000016007	-	93	55.016	ENSAMEG00000019628	-	96	55.016	Ailuropoda_melanoleuca
ENSPCIG00000016007	-	93	54.870	ENSANAG00000037676	GIMAP4	90	54.870	Aotus_nancymaae
ENSPCIG00000016007	-	97	51.242	ENSBTAG00000054649	-	98	51.242	Bos_taurus
ENSPCIG00000016007	-	97	50.621	ENSBTAG00000046257	GIMAP4	98	50.621	Bos_taurus
ENSPCIG00000016007	-	93	55.195	ENSCJAG00000047018	GIMAP4	93	55.195	Callithrix_jacchus
ENSPCIG00000016007	-	98	51.988	ENSCAFG00000004579	GIMAP4	97	51.988	Canis_familiaris
ENSPCIG00000016007	-	98	51.988	ENSCAFG00020006498	GIMAP4	87	51.988	Canis_lupus_dingo
ENSPCIG00000016007	-	95	44.164	ENSCHIG00000005581	-	97	44.164	Capra_hircus
ENSPCIG00000016007	-	90	50.167	ENSCHIG00000023365	-	93	50.167	Capra_hircus
ENSPCIG00000016007	-	95	52.681	ENSCHIG00000019645	-	97	52.681	Capra_hircus
ENSPCIG00000016007	-	90	52.349	ENSCHIG00000023846	-	94	52.349	Capra_hircus
ENSPCIG00000016007	-	94	52.564	ENSCHIG00000020146	-	97	52.564	Capra_hircus
ENSPCIG00000016007	-	95	52.997	ENSCHIG00000013558	-	97	52.997	Capra_hircus
ENSPCIG00000016007	-	93	54.870	ENSTSYG00000000820	GIMAP4	89	54.870	Carlito_syrichta
ENSPCIG00000016007	-	58	61.979	ENSCAPG00000013479	-	95	61.979	Cavia_aperea
ENSPCIG00000016007	-	98	52.000	ENSCPOG00000037321	GIMAP4	99	52.997	Cavia_porcellus
ENSPCIG00000016007	-	93	54.545	ENSCCAG00000033055	GIMAP4	93	54.545	Cebus_capucinus
ENSPCIG00000016007	-	96	53.918	ENSCATG00000038688	GIMAP4	96	53.918	Cercocebus_atys
ENSPCIG00000016007	-	93	54.545	ENSCSAG00000006878	GIMAP4	93	54.545	Chlorocebus_sabaeus
ENSPCIG00000016007	-	96	53.605	ENSCANG00000012786	GIMAP4	96	53.605	Colobus_angolensis_palliatus
ENSPCIG00000016007	-	89	54.422	ENSCGRG00001019121	Gimap4	86	58.947	Cricetulus_griseus_chok1gshd
ENSPCIG00000016007	-	89	54.422	ENSCGRG00000014410	Gimap4	86	58.947	Cricetulus_griseus_crigri
ENSPCIG00000016007	-	99	51.368	ENSECAG00000007681	-	96	50.751	Equus_caballus
ENSPCIG00000016007	-	52	55.172	ENSEEUG00000000786	-	97	55.172	Erinaceus_europaeus
ENSPCIG00000016007	-	92	53.770	ENSEEUG00000012080	-	98	53.770	Erinaceus_europaeus
ENSPCIG00000016007	-	92	52.614	ENSEEUG00000007079	-	93	52.614	Erinaceus_europaeus
ENSPCIG00000016007	-	96	51.724	ENSFCAG00000041619	-	94	51.724	Felis_catus
ENSPCIG00000016007	-	96	52.038	ENSFCAG00000039272	-	94	52.038	Felis_catus
ENSPCIG00000016007	-	89	55.782	ENSFDAG00000016925	GIMAP4	93	55.782	Fukomys_damarensis
ENSPCIG00000016007	-	96	51.411	ENSGGOG00000002351	GIMAP4	96	51.411	Gorilla_gorilla
ENSPCIG00000016007	-	91	54.485	ENSHGLG00000013893	GIMAP4	94	54.485	Heterocephalus_glaber_female
ENSPCIG00000016007	-	91	54.817	ENSHGLG00100007039	GIMAP4	94	54.817	Heterocephalus_glaber_male
ENSPCIG00000016007	-	96	53.292	ENSMFAG00000001041	GIMAP4	96	53.292	Macaca_fascicularis
ENSPCIG00000016007	-	96	53.292	ENSMMUG00000011386	GIMAP4	96	53.292	Macaca_mulatta
ENSPCIG00000016007	-	96	53.292	ENSMNEG00000028648	GIMAP4	96	53.292	Macaca_nemestrina
ENSPCIG00000016007	-	95	53.628	ENSMLEG00000030303	GIMAP4	95	53.628	Mandrillus_leucophaeus
ENSPCIG00000016007	-	92	50.814	ENSMAUG00000014099	Gimap4	97	50.814	Mesocricetus_auratus
ENSPCIG00000016007	-	90	53.356	ENSMICG00000038028	GIMAP4	92	53.356	Microcebus_murinus
ENSPCIG00000016007	-	65	56.881	ENSMOCG00000000523	Gimap4	93	56.881	Microtus_ochrogaster
ENSPCIG00000016007	-	91	50.662	MGP_CAROLIEiJ_G0028349	Gimap4	92	53.695	Mus_caroli
ENSPCIG00000016007	-	91	50.662	ENSMUSG00000054435	Gimap4	92	53.465	Mus_musculus
ENSPCIG00000016007	-	91	50.993	MGP_SPRETEiJ_G0029352	Gimap4	92	53.960	Mus_spretus
ENSPCIG00000016007	-	90	54.333	ENSMLUG00000026238	-	90	54.333	Myotis_lucifugus
ENSPCIG00000016007	-	92	50.489	ENSMLUG00000022191	-	92	50.489	Myotis_lucifugus
ENSPCIG00000016007	-	93	47.588	ENSMLUG00000028074	-	91	47.588	Myotis_lucifugus
ENSPCIG00000016007	-	80	51.515	ENSMLUG00000010885	-	93	51.515	Myotis_lucifugus
ENSPCIG00000016007	-	73	50.622	ENSMLUG00000025412	-	83	48.864	Myotis_lucifugus
ENSPCIG00000016007	-	85	53.025	ENSMLUG00000026208	-	96	53.025	Myotis_lucifugus
ENSPCIG00000016007	-	88	55.670	ENSNGAG00000019504	Gimap4	88	55.670	Nannospalax_galili
ENSPCIG00000016007	-	96	51.515	ENSNLEG00000003833	GIMAP4	98	50.877	Nomascus_leucogenys
ENSPCIG00000016007	-	89	77.703	ENSMEUG00000003459	-	99	77.703	Notamacropus_eugenii
ENSPCIG00000016007	-	88	78.498	ENSMEUG00000011721	-	99	78.498	Notamacropus_eugenii
ENSPCIG00000016007	-	91	46.179	ENSOPRG00000013098	GIMAP4	92	46.179	Ochotona_princeps
ENSPCIG00000016007	-	88	51.890	ENSODEG00000011659	GIMAP4	94	51.890	Octodon_degus
ENSPCIG00000016007	-	98	52.599	ENSOGAG00000026711	-	99	51.462	Otolemur_garnettii
ENSPCIG00000016007	-	89	54.082	ENSOGAG00000025737	-	97	54.082	Otolemur_garnettii
ENSPCIG00000016007	-	95	52.848	ENSOGAG00000001580	-	94	52.848	Otolemur_garnettii
ENSPCIG00000016007	-	90	48.495	ENSOGAG00000002647	-	97	48.495	Otolemur_garnettii
ENSPCIG00000016007	-	95	51.274	ENSOARG00000002143	-	97	51.274	Ovis_aries
ENSPCIG00000016007	-	90	51.678	ENSOARG00000001437	-	95	51.678	Ovis_aries
ENSPCIG00000016007	-	95	51.735	ENSOARG00000001492	-	97	51.735	Ovis_aries
ENSPCIG00000016007	-	86	54.545	ENSOARG00000001318	-	92	54.545	Ovis_aries
ENSPCIG00000016007	-	97	49.221	ENSOARG00000001365	-	97	49.221	Ovis_aries
ENSPCIG00000016007	-	95	49.682	ENSOARG00000001537	-	97	49.682	Ovis_aries
ENSPCIG00000016007	-	96	51.724	ENSPPAG00000039067	GIMAP4	96	51.724	Pan_paniscus
ENSPCIG00000016007	-	65	56.682	ENSPPRG00000024199	-	93	56.682	Panthera_pardus
ENSPCIG00000016007	-	76	53.360	ENSPPRG00000020973	-	92	52.941	Panthera_pardus
ENSPCIG00000016007	-	96	52.351	ENSPTIG00000008974	-	93	52.351	Panthera_tigris_altaica
ENSPCIG00000016007	-	60	54.040	ENSPTIG00000012391	-	86	54.040	Panthera_tigris_altaica
ENSPCIG00000016007	-	96	51.724	ENSPTRG00000047736	-	96	51.724	Pan_troglodytes
ENSPCIG00000016007	-	96	51.724	ENSPTRG00000019859	GIMAP4	96	51.724	Pan_troglodytes
ENSPCIG00000016007	-	96	52.778	ENSPANG00000022511	GIMAP4	99	50.733	Papio_anubis
ENSPCIG00000016007	-	86	51.689	ENSPSIG00000000567	-	95	51.689	Pelodiscus_sinensis
ENSPCIG00000016007	-	99	49.263	ENSPSIG00000004902	-	99	49.128	Pelodiscus_sinensis
ENSPCIG00000016007	-	92	51.475	ENSPEMG00000008007	Gimap4	90	56.566	Peromyscus_maniculatus_bairdii
ENSPCIG00000016007	-	96	52.351	ENSPPYG00000018171	GIMAP4	96	52.351	Pongo_abelii
ENSPCIG00000016007	-	90	54.362	ENSPCOG00000022284	GIMAP4	92	54.362	Propithecus_coquereli
ENSPCIG00000016007	-	90	54.305	ENSPVAG00000001212	GIMAP4	93	54.305	Pteropus_vampyrus
ENSPCIG00000016007	-	91	52.318	ENSRNOG00000008369	Gimap4	94	53.265	Rattus_norvegicus
ENSPCIG00000016007	-	96	53.292	ENSRBIG00000028867	GIMAP4	96	53.292	Rhinopithecus_bieti
ENSPCIG00000016007	-	96	53.292	ENSRROG00000043219	GIMAP4	96	53.292	Rhinopithecus_roxellana
ENSPCIG00000016007	-	93	56.818	ENSSBOG00000031262	GIMAP4	93	56.818	Saimiri_boliviensis_boliviensis
ENSPCIG00000016007	-	62	74.627	ENSSHAG00000011315	-	78	74.627	Sarcophilus_harrisii
ENSPCIG00000016007	-	93	72.168	ENSSHAG00000000842	-	99	67.836	Sarcophilus_harrisii
ENSPCIG00000016007	-	92	53.074	ENSSARG00000008956	-	95	53.074	Sorex_araneus
ENSPCIG00000016007	-	89	51.186	ENSSARG00000006448	-	99	51.186	Sorex_araneus
ENSPCIG00000016007	-	90	50.000	ENSSPUG00000012235	-	92	50.000	Sphenodon_punctatus
ENSPCIG00000016007	-	88	52.027	ENSSPUG00000009782	-	91	52.881	Sphenodon_punctatus
ENSPCIG00000016007	-	96	46.784	ENSSPUG00000009775	-	84	47.661	Sphenodon_punctatus
ENSPCIG00000016007	-	97	49.379	ENSSSCG00000027826	-	99	49.379	Sus_scrofa
ENSPCIG00000016007	-	92	53.922	ENSTBEG00000016415	GIMAP4	99	53.922	Tupaia_belangeri
ENSPCIG00000016007	-	95	54.259	ENSTTRG00000013056	GIMAP4	98	54.259	Tursiops_truncatus
ENSPCIG00000016007	-	93	55.340	ENSUAMG00000004050	-	94	55.340	Ursus_americanus
ENSPCIG00000016007	-	92	55.375	ENSUAMG00000005488	-	93	55.375	Ursus_americanus
ENSPCIG00000016007	-	68	61.504	ENSUMAG00000000843	GIMAP4	77	61.504	Ursus_maritimus
ENSPCIG00000016007	-	93	54.045	ENSVVUG00000009157	GIMAP4	94	54.045	Vulpes_vulpes