EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000016036 (Gene tree)
Gene ID: 110200052
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 29014 bases
Position: chrFUWB01000929.1:1749693-1778706
Accession: 17906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000021121	GUCT	PF08152.12	2e-26	1	1
ENSPCIP00000021116	GUCT	PF08152.12	2.1e-26	1	1
ENSPCIP00000021113	GUCT	PF08152.12	2.1e-26	1	1
ENSPCIP00000021111	GUCT	PF08152.12	2.3e-26	1	1
ENSPCIP00000021121	ResIII	PF04851.15	1e-08	1	1
ENSPCIP00000021116	ResIII	PF04851.15	1.1e-08	1	1
ENSPCIP00000021113	ResIII	PF04851.15	1.2e-08	1	1
ENSPCIP00000021111	ResIII	PF04851.15	1.3e-08	1	1
ENSPCIP00000021116	DEAD	PF00270.29	6.6e-47	1	1
ENSPCIP00000021113	DEAD	PF00270.29	7e-47	1	1
ENSPCIP00000021121	DEAD	PF00270.29	7.1e-47	1	1
ENSPCIP00000021111	DEAD	PF00270.29	7.7e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000026050	DDX50-202	3104	-	ENSPCIP00000021113	721 (aa)	-	-
ENSPCIT00000026048	DDX50-201	3194	-	ENSPCIP00000021111	751 (aa)	-	-
ENSPCIT00000026053	DDX50-203	2306	-	ENSPCIP00000021116	706 (aa)	-	-
ENSPCIT00000026058	DDX50-204	2859	-	ENSPCIP00000021121	701 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000016036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000016036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000016036	DDX50	52	30.628	ENSPCIG00000001050	DDX49	67	30.874
ENSPCIG00000016036	DDX50	52	32.800	ENSPCIG00000002296	DDX41	62	32.812
ENSPCIG00000016036	DDX50	52	33.780	ENSPCIG00000013057	EIF4A2	90	33.528
ENSPCIG00000016036	DDX50	51	32.703	ENSPCIG00000002492	-	55	34.234
ENSPCIG00000016036	DDX50	51	30.220	ENSPCIG00000012091	DDX6	71	30.220
ENSPCIG00000016036	DDX50	51	35.813	ENSPCIG00000017981	-	80	35.813
ENSPCIG00000016036	DDX50	52	32.888	ENSPCIG00000028856	EIF4A1	91	32.796
ENSPCIG00000016036	DDX50	52	34.771	ENSPCIG00000001652	DDX17	55	34.853
ENSPCIG00000016036	DDX50	82	68.995	ENSPCIG00000015505	DDX21	75	71.273
ENSPCIG00000016036	DDX50	51	33.511	ENSPCIG00000029015	DDX18	56	33.333
ENSPCIG00000016036	DDX50	51	31.781	ENSPCIG00000005856	-	95	31.781
ENSPCIG00000016036	DDX50	57	33.175	ENSPCIG00000008052	DDX27	66	33.933
ENSPCIG00000016036	DDX50	51	33.607	ENSPCIG00000003013	DDX10	75	33.607

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000016036	DDX50	93	81.402	ENSG00000107625	DDX50	92	80.147	Homo_sapiens
ENSPCIG00000016036	DDX50	95	79.767	ENSAMEG00000017992	DDX50	92	79.736	Ailuropoda_melanoleuca
ENSPCIG00000016036	DDX50	94	63.937	ENSANAG00000017785	-	91	63.781	Aotus_nancymaae
ENSPCIG00000016036	DDX50	95	80.321	ENSBTAG00000033413	DDX50	92	80.294	Bos_taurus
ENSPCIG00000016036	DDX50	93	81.250	ENSCJAG00000018844	DDX50	92	80.000	Callithrix_jacchus
ENSPCIG00000016036	DDX50	95	79.913	ENSCAFG00000013776	DDX50	98	79.883	Canis_familiaris
ENSPCIG00000016036	DDX50	95	79.913	ENSCAFG00020025977	DDX50	91	79.883	Canis_lupus_dingo
ENSPCIG00000016036	DDX50	93	81.402	ENSCHIG00000000285	DDX50	91	80.294	Capra_hircus
ENSPCIG00000016036	DDX50	93	80.945	ENSTSYG00000004192	DDX50	98	76.099	Carlito_syrichta
ENSPCIG00000016036	DDX50	91	66.822	ENSCAPG00000007230	-	86	70.952	Cavia_aperea
ENSPCIG00000016036	DDX50	93	80.889	ENSCPOG00000002131	-	91	80.267	Cavia_porcellus
ENSPCIG00000016036	DDX50	81	78.280	ENSCCAG00000030543	DDX50	90	78.448	Cebus_capucinus
ENSPCIG00000016036	DDX50	94	56.076	ENSCATG00000039259	-	79	66.997	Cercocebus_atys
ENSPCIG00000016036	DDX50	99	57.799	ENSCATG00000035153	-	88	78.797	Cercocebus_atys
ENSPCIG00000016036	DDX50	92	81.442	ENSCATG00000032463	DDX50	90	80.763	Cercocebus_atys
ENSPCIG00000016036	DDX50	96	57.245	ENSCLAG00000001938	-	97	57.948	Chinchilla_lanigera
ENSPCIG00000016036	DDX50	50	70.811	ENSCLAG00000001553	-	78	77.850	Chinchilla_lanigera
ENSPCIG00000016036	DDX50	93	81.679	ENSCLAG00000012957	-	92	80.265	Chinchilla_lanigera
ENSPCIG00000016036	DDX50	93	81.250	ENSCSAG00000007703	DDX50	92	80.000	Chlorocebus_sabaeus
ENSPCIG00000016036	DDX50	92	81.288	ENSCHOG00000000233	DDX50	97	81.202	Choloepus_hoffmanni
ENSPCIG00000016036	DDX50	94	66.471	ENSCANG00000036450	-	95	62.963	Colobus_angolensis_palliatus
ENSPCIG00000016036	DDX50	99	53.408	ENSCANG00000028077	-	91	53.079	Colobus_angolensis_palliatus
ENSPCIG00000016036	DDX50	85	61.789	ENSCANG00000018820	-	85	64.738	Colobus_angolensis_palliatus
ENSPCIG00000016036	DDX50	93	80.640	ENSCGRG00001020223	Ddx50	92	79.234	Cricetulus_griseus_chok1gshd
ENSPCIG00000016036	DDX50	94	79.559	ENSCGRG00000015884	Ddx50	92	79.234	Cricetulus_griseus_crigri
ENSPCIG00000016036	DDX50	90	76.534	ENSDNOG00000001675	DDX50	100	76.344	Dasypus_novemcinctus
ENSPCIG00000016036	DDX50	93	80.945	ENSDORG00000007310	Ddx50	98	75.962	Dipodomys_ordii
ENSPCIG00000016036	DDX50	84	86.768	ENSETEG00000014069	DDX50	88	80.690	Echinops_telfairi
ENSPCIG00000016036	DDX50	95	79.738	ENSEASG00005015595	DDX50	91	79.853	Equus_asinus_asinus
ENSPCIG00000016036	DDX50	95	79.883	ENSECAG00000023044	DDX50	91	80.000	Equus_caballus
ENSPCIG00000016036	DDX50	83	82.781	ENSEEUG00000005782	DDX50	76	86.535	Erinaceus_europaeus
ENSPCIG00000016036	DDX50	93	81.279	ENSFCAG00000012678	DDX50	91	80.176	Felis_catus
ENSPCIG00000016036	DDX50	94	75.403	ENSFDAG00000016109	-	91	75.294	Fukomys_damarensis
ENSPCIG00000016036	DDX50	93	81.402	ENSGGOG00000010100	DDX50	92	80.147	Gorilla_gorilla
ENSPCIG00000016036	DDX50	50	67.473	ENSGGOG00000041063	-	81	73.418	Gorilla_gorilla
ENSPCIG00000016036	DDX50	93	80.793	ENSHGLG00000013466	DDX50	95	78.063	Heterocephalus_glaber_female
ENSPCIG00000016036	DDX50	93	80.793	ENSHGLG00100017191	DDX50	95	78.063	Heterocephalus_glaber_male
ENSPCIG00000016036	DDX50	84	72.340	ENSHGLG00100006568	-	92	71.892	Heterocephalus_glaber_male
ENSPCIG00000016036	DDX50	94	78.216	ENSSTOG00000021852	-	92	77.827	Ictidomys_tridecemlineatus
ENSPCIG00000016036	DDX50	98	59.448	ENSJJAG00000019626	-	92	60.352	Jaculus_jaculus
ENSPCIG00000016036	DDX50	94	78.624	ENSJJAG00000023928	-	95	77.066	Jaculus_jaculus
ENSPCIG00000016036	DDX50	93	81.250	ENSLAFG00000006186	DDX50	92	80.147	Loxodonta_africana
ENSPCIG00000016036	DDX50	99	57.756	ENSMFAG00000045339	-	88	78.165	Macaca_fascicularis
ENSPCIG00000016036	DDX50	93	81.250	ENSMFAG00000044067	DDX50	92	80.000	Macaca_fascicularis
ENSPCIG00000016036	DDX50	93	81.250	ENSMMUG00000001006	DDX50	90	83.415	Macaca_mulatta
ENSPCIG00000016036	DDX50	82	60.104	ENSMMUG00000045343	-	74	60.940	Macaca_mulatta
ENSPCIG00000016036	DDX50	98	58.693	ENSMNEG00000045530	-	88	78.797	Macaca_nemestrina
ENSPCIG00000016036	DDX50	94	73.830	ENSMNEG00000031664	DDX50	91	73.715	Macaca_nemestrina
ENSPCIG00000016036	DDX50	93	79.573	ENSMLEG00000037313	DDX50	91	78.382	Mandrillus_leucophaeus
ENSPCIG00000016036	DDX50	97	56.901	ENSMLEG00000041988	-	87	77.532	Mandrillus_leucophaeus
ENSPCIG00000016036	DDX50	58	74.880	ENSMAUG00000022192	Ddx50	100	74.101	Mesocricetus_auratus
ENSPCIG00000016036	DDX50	94	74.307	ENSMICG00000017539	DDX50	98	70.289	Microcebus_murinus
ENSPCIG00000016036	DDX50	93	80.243	ENSMOCG00000001676	Ddx50	92	78.708	Microtus_ochrogaster
ENSPCIG00000016036	DDX50	94	95.894	ENSMODG00000010741	DDX50	100	92.752	Monodelphis_domestica
ENSPCIG00000016036	DDX50	94	79.148	MGP_CAROLIEiJ_G0015389	Ddx50	98	75.620	Mus_caroli
ENSPCIG00000016036	DDX50	94	79.148	ENSMUSG00000020076	Ddx50	98	75.620	Mus_musculus
ENSPCIG00000016036	DDX50	94	79.148	MGP_PahariEiJ_G0030805	Ddx50	98	75.620	Mus_pahari
ENSPCIG00000016036	DDX50	94	79.148	MGP_SPRETEiJ_G0016200	Ddx50	98	75.620	Mus_spretus
ENSPCIG00000016036	DDX50	90	80.215	ENSMPUG00000004589	DDX50	99	79.908	Mustela_putorius_furo
ENSPCIG00000016036	DDX50	94	79.372	ENSMLUG00000017590	DDX50	92	78.824	Myotis_lucifugus
ENSPCIG00000016036	DDX50	94	79.941	ENSNGAG00000004283	Ddx50	92	79.676	Nannospalax_galili
ENSPCIG00000016036	DDX50	88	59.903	ENSNLEG00000035506	-	87	69.085	Nomascus_leucogenys
ENSPCIG00000016036	DDX50	93	81.250	ENSNLEG00000011631	DDX50	92	80.000	Nomascus_leucogenys
ENSPCIG00000016036	DDX50	94	78.414	ENSOPRG00000001619	DDX50	92	78.319	Ochotona_princeps
ENSPCIG00000016036	DDX50	93	81.374	ENSODEG00000014597	-	98	76.479	Octodon_degus
ENSPCIG00000016036	DDX50	93	68.507	ENSOANG00000004776	DDX50	90	63.636	Ornithorhynchus_anatinus
ENSPCIG00000016036	DDX50	96	79.191	ENSOCUG00000002879	DDX50	95	79.204	Oryctolagus_cuniculus
ENSPCIG00000016036	DDX50	93	80.945	ENSOGAG00000001844	DDX50	92	79.853	Otolemur_garnettii
ENSPCIG00000016036	DDX50	93	81.707	ENSOARG00000005264	DDX50	91	80.588	Ovis_aries
ENSPCIG00000016036	DDX50	93	81.402	ENSPPAG00000040723	DDX50	92	80.147	Pan_paniscus
ENSPCIG00000016036	DDX50	93	81.279	ENSPPRG00000015826	DDX50	92	80.176	Panthera_pardus
ENSPCIG00000016036	DDX50	93	81.279	ENSPTIG00000008454	DDX50	92	80.176	Panthera_tigris_altaica
ENSPCIG00000016036	DDX50	93	81.402	ENSPTRG00000002562	DDX50	92	80.147	Pan_troglodytes
ENSPCIG00000016036	DDX50	94	73.499	ENSPANG00000022143	-	95	69.516	Papio_anubis
ENSPCIG00000016036	DDX50	94	78.917	ENSPEMG00000020899	-	92	78.645	Peromyscus_maniculatus_bairdii
ENSPCIG00000016036	DDX50	87	83.577	ENSPPYG00000002390	DDX50	90	83.415	Pongo_abelii
ENSPCIG00000016036	DDX50	87	68.174	ENSPCAG00000009692	DDX50	100	68.123	Procavia_capensis
ENSPCIG00000016036	DDX50	66	73.978	ENSPCOG00000012574	DDX50	71	74.459	Propithecus_coquereli
ENSPCIG00000016036	DDX50	82	73.913	ENSPVAG00000009519	DDX50	77	73.913	Pteropus_vampyrus
ENSPCIG00000016036	DDX50	94	78.561	ENSRNOG00000000396	Ddx50	92	78.614	Rattus_norvegicus
ENSPCIG00000016036	DDX50	93	58.074	ENSRBIG00000036573	-	79	67.974	Rhinopithecus_bieti
ENSPCIG00000016036	DDX50	88	81.290	ENSRBIG00000042841	-	98	83.448	Rhinopithecus_bieti
ENSPCIG00000016036	DDX50	98	51.724	ENSRBIG00000039673	-	98	50.272	Rhinopithecus_bieti
ENSPCIG00000016036	DDX50	93	81.250	ENSRROG00000032158	DDX50	90	83.415	Rhinopithecus_roxellana
ENSPCIG00000016036	DDX50	87	58.987	ENSRROG00000022853	-	80	62.829	Rhinopithecus_roxellana
ENSPCIG00000016036	DDX50	94	69.400	ENSSBOG00000014441	DDX50	99	70.973	Saimiri_boliviensis_boliviensis
ENSPCIG00000016036	DDX50	88	64.516	ENSSHAG00000005334	-	73	71.661	Sarcophilus_harrisii
ENSPCIG00000016036	DDX50	92	96.914	ENSSHAG00000005690	DDX50	99	93.530	Sarcophilus_harrisii
ENSPCIG00000016036	DDX50	90	72.923	ENSSARG00000013553	DDX50	88	72.923	Sorex_araneus
ENSPCIG00000016036	DDX50	93	81.402	ENSSSCG00000010246	DDX50	91	80.294	Sus_scrofa
ENSPCIG00000016036	DDX50	94	59.824	ENSTBEG00000001085	DDX50	91	59.352	Tupaia_belangeri
ENSPCIG00000016036	DDX50	94	73.646	ENSTTRG00000012408	DDX50	91	73.529	Tursiops_truncatus
ENSPCIG00000016036	DDX50	95	79.913	ENSUAMG00000010976	DDX50	89	88.359	Ursus_americanus
ENSPCIG00000016036	DDX50	95	79.913	ENSUMAG00000007726	DDX50	91	79.708	Ursus_maritimus
ENSPCIG00000016036	DDX50	93	81.707	ENSVPAG00000000626	DDX50	92	80.147	Vicugna_pacos
ENSPCIG00000016036	DDX50	83	79.626	ENSVVUG00000020366	DDX50	97	79.626	Vulpes_vulpes