EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000016175 (Gene tree)
Gene ID: 110211800
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 35346 bases
Position: chrFUWB01002397.1:278853-314198
Accession: 110211800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000021322	SRP54	PF00448.22	2.8e-78	1	1
ENSPCIP00000021322	SRP54_N	PF02881.19	2.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000026306	SRP54-201	1534	-	ENSPCIP00000021322	504 (aa)	XP_020847050	UPI000A28B3A6

Gene Model

Click here to download ENSPCIG00000016175's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000016175's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000016175	SRP54	100	99.802	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSPCIG00000016175	SRP54	100	95.833	ENSAPOG00000011314	srp54	100	95.833	Acanthochromis_polyacanthus
ENSPCIG00000016175	SRP54	100	99.802	ENSAMEG00000015544	SRP54	100	99.802	Ailuropoda_melanoleuca
ENSPCIG00000016175	SRP54	89	94.655	ENSACIG00000022831	srp54	97	94.655	Amphilophus_citrinellus
ENSPCIG00000016175	SRP54	100	95.833	ENSAOCG00000019401	srp54	100	95.833	Amphiprion_ocellaris
ENSPCIG00000016175	SRP54	100	95.833	ENSAPEG00000001977	srp54	100	95.833	Amphiprion_percula
ENSPCIG00000016175	SRP54	100	96.230	ENSATEG00000013877	srp54	100	96.230	Anabas_testudineus
ENSPCIG00000016175	SRP54	94	98.523	ENSAPLG00000010125	SRP54	95	98.523	Anas_platyrhynchos
ENSPCIG00000016175	SRP54	86	95.392	ENSACAG00000010631	-	100	95.392	Anolis_carolinensis
ENSPCIG00000016175	SRP54	65	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSPCIG00000016175	SRP54	100	98.413	ENSACAG00000002103	-	100	98.413	Anolis_carolinensis
ENSPCIG00000016175	SRP54	100	99.802	ENSANAG00000022133	SRP54	100	99.802	Aotus_nancymaae
ENSPCIG00000016175	SRP54	100	96.032	ENSACLG00000015866	srp54	100	96.032	Astatotilapia_calliptera
ENSPCIG00000016175	SRP54	100	95.635	ENSAMXG00000032669	SRP54	100	95.635	Astyanax_mexicanus
ENSPCIG00000016175	SRP54	100	99.802	ENSBTAG00000019085	SRP54	100	99.802	Bos_taurus
ENSPCIG00000016175	SRP54	98	71.687	WBGene00009012	F21D5.7	100	71.687	Caenorhabditis_elegans
ENSPCIG00000016175	SRP54	100	99.802	ENSCJAG00000006581	SRP54	100	99.802	Callithrix_jacchus
ENSPCIG00000016175	SRP54	100	99.802	ENSCAFG00000013331	SRP54	100	99.802	Canis_familiaris
ENSPCIG00000016175	SRP54	100	99.802	ENSCAFG00020023427	SRP54	100	99.802	Canis_lupus_dingo
ENSPCIG00000016175	SRP54	100	99.802	ENSCHIG00000026345	SRP54	100	99.802	Capra_hircus
ENSPCIG00000016175	SRP54	100	99.603	ENSTSYG00000002680	-	100	99.603	Carlito_syrichta
ENSPCIG00000016175	SRP54	94	88.421	ENSTSYG00000035333	-	93	88.421	Carlito_syrichta
ENSPCIG00000016175	SRP54	94	64.286	ENSCAPG00000008780	SRP54	100	64.286	Cavia_aperea
ENSPCIG00000016175	SRP54	100	99.405	ENSCPOG00000003691	SRP54	100	99.405	Cavia_porcellus
ENSPCIG00000016175	SRP54	90	99.524	ENSCCAG00000024179	SRP54	100	99.761	Cebus_capucinus
ENSPCIG00000016175	SRP54	100	99.802	ENSCATG00000034083	SRP54	100	99.802	Cercocebus_atys
ENSPCIG00000016175	SRP54	100	99.802	ENSCLAG00000015076	SRP54	100	99.802	Chinchilla_lanigera
ENSPCIG00000016175	SRP54	100	99.802	ENSCSAG00000015575	SRP54	100	99.802	Chlorocebus_sabaeus
ENSPCIG00000016175	SRP54	95	87.734	ENSCHOG00000008986	SRP54	100	87.734	Choloepus_hoffmanni
ENSPCIG00000016175	SRP54	100	99.008	ENSCPBG00000026195	SRP54	100	99.008	Chrysemys_picta_bellii
ENSPCIG00000016175	SRP54	100	81.746	ENSCING00000007380	-	100	81.746	Ciona_intestinalis
ENSPCIG00000016175	SRP54	100	99.802	ENSCANG00000028532	SRP54	100	99.802	Colobus_angolensis_palliatus
ENSPCIG00000016175	SRP54	100	99.405	ENSCGRG00001009525	-	100	99.405	Cricetulus_griseus_chok1gshd
ENSPCIG00000016175	SRP54	76	99.221	ENSCGRG00000009453	-	89	99.221	Cricetulus_griseus_crigri
ENSPCIG00000016175	SRP54	100	95.040	ENSCSEG00000012392	srp54	100	95.040	Cynoglossus_semilaevis
ENSPCIG00000016175	SRP54	100	95.833	ENSCVAG00000010395	srp54	100	95.833	Cyprinodon_variegatus
ENSPCIG00000016175	SRP54	100	96.032	ENSDARG00000098367	srp54	100	96.032	Danio_rerio
ENSPCIG00000016175	SRP54	100	99.802	ENSDNOG00000032525	SRP54	100	99.802	Dasypus_novemcinctus
ENSPCIG00000016175	SRP54	89	85.045	ENSDORG00000005159	-	97	85.045	Dipodomys_ordii
ENSPCIG00000016175	SRP54	96	77.526	FBgn0010747	Srp54k	98	77.108	Drosophila_melanogaster
ENSPCIG00000016175	SRP54	83	58.134	ENSETEG00000012102	-	99	58.134	Echinops_telfairi
ENSPCIG00000016175	SRP54	100	98.611	ENSETEG00000016307	-	100	98.611	Echinops_telfairi
ENSPCIG00000016175	SRP54	100	87.500	ENSEBUG00000009437	-	100	87.500	Eptatretus_burgeri
ENSPCIG00000016175	SRP54	100	99.802	ENSEASG00005002057	SRP54	100	99.802	Equus_asinus_asinus
ENSPCIG00000016175	SRP54	99	99.598	ENSECAG00000018042	SRP54	98	99.598	Equus_caballus
ENSPCIG00000016175	SRP54	100	83.135	ENSEEUG00000001511	SRP54	100	83.135	Erinaceus_europaeus
ENSPCIG00000016175	SRP54	100	95.238	ENSELUG00000003395	srp54	100	95.238	Esox_lucius
ENSPCIG00000016175	SRP54	100	99.603	ENSFCAG00000032033	SRP54	100	99.603	Felis_catus
ENSPCIG00000016175	SRP54	100	98.611	ENSFALG00000005995	SRP54	100	98.611	Ficedula_albicollis
ENSPCIG00000016175	SRP54	100	99.802	ENSFDAG00000016767	SRP54	100	99.802	Fukomys_damarensis
ENSPCIG00000016175	SRP54	100	95.437	ENSFHEG00000004263	srp54	100	95.437	Fundulus_heteroclitus
ENSPCIG00000016175	SRP54	95	90.167	ENSGMOG00000011391	srp54	100	90.167	Gadus_morhua
ENSPCIG00000016175	SRP54	100	98.611	ENSGALG00000023135	SRP54	100	98.611	Gallus_gallus
ENSPCIG00000016175	SRP54	100	96.032	ENSGAFG00000011586	srp54	100	96.032	Gambusia_affinis
ENSPCIG00000016175	SRP54	100	95.437	ENSGACG00000004181	srp54	100	95.437	Gasterosteus_aculeatus
ENSPCIG00000016175	SRP54	100	99.008	ENSGAGG00000014766	SRP54	100	99.008	Gopherus_agassizii
ENSPCIG00000016175	SRP54	100	99.802	ENSGGOG00000002926	SRP54	100	99.802	Gorilla_gorilla
ENSPCIG00000016175	SRP54	100	96.032	ENSHBUG00000005678	srp54	100	96.032	Haplochromis_burtoni
ENSPCIG00000016175	SRP54	100	99.802	ENSHGLG00000002850	SRP54	100	99.802	Heterocephalus_glaber_female
ENSPCIG00000016175	SRP54	100	68.911	ENSHGLG00100007281	-	100	68.911	Heterocephalus_glaber_male
ENSPCIG00000016175	SRP54	100	99.802	ENSHGLG00100005263	SRP54	100	99.802	Heterocephalus_glaber_male
ENSPCIG00000016175	SRP54	100	94.048	ENSHCOG00000021127	srp54	100	94.048	Hippocampus_comes
ENSPCIG00000016175	SRP54	100	95.238	ENSIPUG00000001420	srp54	100	95.238	Ictalurus_punctatus
ENSPCIG00000016175	SRP54	100	99.802	ENSSTOG00000016023	SRP54	100	99.802	Ictidomys_tridecemlineatus
ENSPCIG00000016175	SRP54	87	76.364	ENSJJAG00000016404	-	100	76.364	Jaculus_jaculus
ENSPCIG00000016175	SRP54	100	94.643	ENSJJAG00000013417	-	100	94.643	Jaculus_jaculus
ENSPCIG00000016175	SRP54	100	95.437	ENSKMAG00000007707	srp54	100	95.437	Kryptolebias_marmoratus
ENSPCIG00000016175	SRP54	100	95.833	ENSLBEG00000018690	srp54	100	95.833	Labrus_bergylta
ENSPCIG00000016175	SRP54	100	95.833	ENSLBEG00000021122	srp54	100	95.833	Labrus_bergylta
ENSPCIG00000016175	SRP54	100	96.032	ENSLACG00000017890	SRP54	100	96.032	Latimeria_chalumnae
ENSPCIG00000016175	SRP54	100	96.825	ENSLOCG00000009440	srp54	100	96.825	Lepisosteus_oculatus
ENSPCIG00000016175	SRP54	100	99.802	ENSLAFG00000012007	SRP54	100	99.802	Loxodonta_africana
ENSPCIG00000016175	SRP54	100	99.802	ENSMFAG00000044371	SRP54	100	99.802	Macaca_fascicularis
ENSPCIG00000016175	SRP54	100	99.802	ENSMMUG00000015073	FAM177A1	100	99.802	Macaca_mulatta
ENSPCIG00000016175	SRP54	100	99.802	ENSMNEG00000006947	SRP54	100	99.802	Macaca_nemestrina
ENSPCIG00000016175	SRP54	100	99.802	ENSMLEG00000042251	SRP54	100	99.802	Mandrillus_leucophaeus
ENSPCIG00000016175	SRP54	100	96.032	ENSMAMG00000004803	srp54	100	96.032	Mastacembelus_armatus
ENSPCIG00000016175	SRP54	100	96.032	ENSMZEG00005027528	srp54	100	96.032	Maylandia_zebra
ENSPCIG00000016175	SRP54	100	93.874	ENSMGAG00000012481	SRP54	100	93.874	Meleagris_gallopavo
ENSPCIG00000016175	SRP54	100	99.603	ENSMAUG00000014447	-	100	99.603	Mesocricetus_auratus
ENSPCIG00000016175	SRP54	100	99.802	ENSMICG00000010270	SRP54	100	99.802	Microcebus_murinus
ENSPCIG00000016175	SRP54	87	99.545	ENSMOCG00000000948	-	100	99.545	Microtus_ochrogaster
ENSPCIG00000016175	SRP54	89	94.183	ENSMMOG00000020303	srp54	98	94.183	Mola_mola
ENSPCIG00000016175	SRP54	100	99.802	ENSMODG00000012925	-	100	99.802	Monodelphis_domestica
ENSPCIG00000016175	SRP54	100	99.802	ENSMODG00000023150	-	100	99.802	Monodelphis_domestica
ENSPCIG00000016175	SRP54	89	94.643	ENSMALG00000009163	srp54	99	94.643	Monopterus_albus
ENSPCIG00000016175	SRP54	100	99.603	MGP_CAROLIEiJ_G0017754	-	100	99.603	Mus_caroli
ENSPCIG00000016175	SRP54	100	98.810	ENSMUSG00000079108	Srp54c	100	98.810	Mus_musculus
ENSPCIG00000016175	SRP54	100	99.603	ENSMUSG00000073079	Srp54a	100	99.603	Mus_musculus
ENSPCIG00000016175	SRP54	100	99.603	ENSMUSG00000112449	Srp54b	100	99.603	Mus_musculus
ENSPCIG00000016175	SRP54	100	99.603	MGP_PahariEiJ_G0029510	-	100	99.603	Mus_pahari
ENSPCIG00000016175	SRP54	100	99.802	ENSMPUG00000016302	SRP54	100	99.802	Mustela_putorius_furo
ENSPCIG00000016175	SRP54	100	99.206	ENSMLUG00000008958	SRP54	100	99.206	Myotis_lucifugus
ENSPCIG00000016175	SRP54	100	89.683	ENSNGAG00000019806	-	100	89.683	Nannospalax_galili
ENSPCIG00000016175	SRP54	87	95.682	ENSNBRG00000006000	srp54	100	95.682	Neolamprologus_brichardi
ENSPCIG00000016175	SRP54	100	99.802	ENSNLEG00000003496	SRP54	100	99.802	Nomascus_leucogenys
ENSPCIG00000016175	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSPCIG00000016175	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSPCIG00000016175	SRP54	100	99.802	ENSODEG00000004865	SRP54	100	99.802	Octodon_degus
ENSPCIG00000016175	SRP54	100	96.032	ENSONIG00000011768	srp54	100	96.032	Oreochromis_niloticus
ENSPCIG00000016175	SRP54	100	99.802	ENSOANG00000014051	SRP54	100	99.802	Ornithorhynchus_anatinus
ENSPCIG00000016175	SRP54	100	99.206	ENSOCUG00000007838	SRP54	100	99.206	Oryctolagus_cuniculus
ENSPCIG00000016175	SRP54	100	95.833	ENSORLG00000010027	srp54	100	95.833	Oryzias_latipes
ENSPCIG00000016175	SRP54	100	95.833	ENSORLG00020001878	srp54	100	95.833	Oryzias_latipes_hni
ENSPCIG00000016175	SRP54	100	95.833	ENSORLG00015021866	srp54	100	95.833	Oryzias_latipes_hsok
ENSPCIG00000016175	SRP54	100	95.635	ENSOMEG00000020952	srp54	100	95.635	Oryzias_melastigma
ENSPCIG00000016175	SRP54	100	99.802	ENSOGAG00000012188	SRP54	100	99.802	Otolemur_garnettii
ENSPCIG00000016175	SRP54	100	99.802	ENSOARG00000007160	SRP54	100	99.802	Ovis_aries
ENSPCIG00000016175	SRP54	100	99.802	ENSPPAG00000017434	SRP54	100	99.802	Pan_paniscus
ENSPCIG00000016175	SRP54	100	98.611	ENSPPRG00000014047	SRP54	100	98.611	Panthera_pardus
ENSPCIG00000016175	SRP54	100	99.603	ENSPTIG00000000744	SRP54	96	99.603	Panthera_tigris_altaica
ENSPCIG00000016175	SRP54	100	99.802	ENSPTRG00000006259	FAM177A1	100	99.802	Pan_troglodytes
ENSPCIG00000016175	SRP54	100	99.802	ENSPANG00000023853	SRP54	100	99.802	Papio_anubis
ENSPCIG00000016175	SRP54	100	95.635	ENSPKIG00000001953	srp54	100	95.635	Paramormyrops_kingsleyae
ENSPCIG00000016175	SRP54	100	98.810	ENSPSIG00000006476	SRP54	100	98.810	Pelodiscus_sinensis
ENSPCIG00000016175	SRP54	91	93.043	ENSPMGG00000004127	srp54	99	93.043	Periophthalmus_magnuspinnatus
ENSPCIG00000016175	SRP54	100	86.706	ENSPEMG00000019634	-	100	86.706	Peromyscus_maniculatus_bairdii
ENSPCIG00000016175	SRP54	100	88.690	ENSPMAG00000006078	-	100	88.690	Petromyzon_marinus
ENSPCIG00000016175	SRP54	100	96.032	ENSPFOG00000008870	srp54	100	96.032	Poecilia_formosa
ENSPCIG00000016175	SRP54	100	96.032	ENSPLAG00000009889	srp54	100	96.032	Poecilia_latipinna
ENSPCIG00000016175	SRP54	100	96.032	ENSPMEG00000008601	srp54	100	96.032	Poecilia_mexicana
ENSPCIG00000016175	SRP54	100	96.032	ENSPREG00000004505	srp54	100	96.032	Poecilia_reticulata
ENSPCIG00000016175	SRP54	100	94.643	ENSPPYG00000005739	SRP54	100	94.643	Pongo_abelii
ENSPCIG00000016175	SRP54	100	95.635	ENSPCAG00000006268	SRP54	100	95.635	Procavia_capensis
ENSPCIG00000016175	SRP54	100	97.822	ENSPCOG00000022473	SRP54	100	97.822	Propithecus_coquereli
ENSPCIG00000016175	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSPCIG00000016175	SRP54	100	96.032	ENSPNYG00000009717	srp54	100	96.032	Pundamilia_nyererei
ENSPCIG00000016175	SRP54	100	95.833	ENSPNAG00000008544	srp54	100	95.833	Pygocentrus_nattereri
ENSPCIG00000016175	SRP54	100	99.405	ENSRNOG00000032776	Srp54a	100	99.405	Rattus_norvegicus
ENSPCIG00000016175	SRP54	100	99.802	ENSRROG00000041292	SRP54	100	99.802	Rhinopithecus_roxellana
ENSPCIG00000016175	SRP54	86	53.061	YPR088C	SRP54	95	48.276	Saccharomyces_cerevisiae
ENSPCIG00000016175	SRP54	94	99.789	ENSSBOG00000035145	SRP54	100	99.789	Saimiri_boliviensis_boliviensis
ENSPCIG00000016175	SRP54	68	100.000	ENSSHAG00000000671	SRP54	100	100.000	Sarcophilus_harrisii
ENSPCIG00000016175	SRP54	100	96.429	ENSSFOG00015013920	srp54	100	96.429	Scleropages_formosus
ENSPCIG00000016175	SRP54	100	89.888	ENSSMAG00000002441	srp54	100	89.888	Scophthalmus_maximus
ENSPCIG00000016175	SRP54	100	95.635	ENSSDUG00000018586	srp54	100	95.635	Seriola_dumerili
ENSPCIG00000016175	SRP54	100	95.437	ENSSLDG00000010476	srp54	100	95.437	Seriola_lalandi_dorsalis
ENSPCIG00000016175	SRP54	100	99.802	ENSSARG00000002744	SRP54	100	99.802	Sorex_araneus
ENSPCIG00000016175	SRP54	100	99.008	ENSSPUG00000013101	SRP54	100	99.008	Sphenodon_punctatus
ENSPCIG00000016175	SRP54	100	95.833	ENSSPAG00000002354	srp54	100	95.833	Stegastes_partitus
ENSPCIG00000016175	SRP54	100	99.802	ENSSSCG00000001955	SRP54	100	99.802	Sus_scrofa
ENSPCIG00000016175	SRP54	94	98.523	ENSTGUG00000011945	-	95	98.523	Taeniopygia_guttata
ENSPCIG00000016175	SRP54	100	95.040	ENSTRUG00000007057	srp54	100	95.040	Takifugu_rubripes
ENSPCIG00000016175	SRP54	100	94.643	ENSTNIG00000002589	srp54	100	94.643	Tetraodon_nigroviridis
ENSPCIG00000016175	SRP54	89	91.275	ENSTBEG00000011409	SRP54	100	91.275	Tupaia_belangeri
ENSPCIG00000016175	SRP54	100	89.683	ENSTTRG00000000928	SRP54	100	89.683	Tursiops_truncatus
ENSPCIG00000016175	SRP54	52	99.618	ENSUAMG00000012385	SRP54	100	99.618	Ursus_americanus
ENSPCIG00000016175	SRP54	100	99.802	ENSUMAG00000011234	SRP54	100	99.802	Ursus_maritimus
ENSPCIG00000016175	SRP54	94	99.578	ENSVPAG00000005668	SRP54	100	99.578	Vicugna_pacos
ENSPCIG00000016175	SRP54	100	99.802	ENSVVUG00000019962	SRP54	100	99.802	Vulpes_vulpes
ENSPCIG00000016175	SRP54	100	82.249	ENSXETG00000012290	srp54	100	82.249	Xenopus_tropicalis
ENSPCIG00000016175	SRP54	88	95.937	ENSXCOG00000004658	srp54	96	95.937	Xiphophorus_couchianus
ENSPCIG00000016175	SRP54	100	96.032	ENSXMAG00000018315	srp54	100	96.032	Xiphophorus_maculatus