EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000016350 (Gene tree)
Gene ID: 110214798
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 91651 bases
Position: chrFUWB01001569.1:45366-137016
Accession: 110214798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000021543	Npa1	PF11707.8	3.3e-85	1	1
ENSPCIP00000021538	Npa1	PF11707.8	3.6e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000026589	URB1-202	8351	-	ENSPCIP00000021543	2213 (aa)	-	-
ENSPCIT00000026584	URB1-201	6810	XM_020995880	ENSPCIP00000021538	2269 (aa)	XP_020851539	-

Gene Model

Click here to download ENSPCIG00000016350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000016350's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000016350	URB1	99	64.536	ENSG00000142207	URB1	99	64.301	Homo_sapiens
ENSPCIG00000016350	URB1	99	42.430	ENSAPOG00000020308	urb1	99	42.062	Acanthochromis_polyacanthus
ENSPCIG00000016350	URB1	99	63.493	ENSAMEG00000011998	URB1	99	63.130	Ailuropoda_melanoleuca
ENSPCIG00000016350	URB1	96	43.744	ENSACIG00000003248	urb1	96	43.744	Amphilophus_citrinellus
ENSPCIG00000016350	URB1	99	40.359	ENSAOCG00000010364	urb1	99	40.026	Amphiprion_ocellaris
ENSPCIG00000016350	URB1	97	52.211	ENSAPEG00000010758	urb1	99	52.211	Amphiprion_percula
ENSPCIG00000016350	URB1	99	43.240	ENSATEG00000011790	urb1	99	42.807	Anabas_testudineus
ENSPCIG00000016350	URB1	98	58.980	ENSAPLG00000012791	URB1	99	58.951	Anas_platyrhynchos
ENSPCIG00000016350	URB1	99	55.610	ENSACAG00000002817	URB1	99	55.318	Anolis_carolinensis
ENSPCIG00000016350	URB1	99	64.193	ENSANAG00000024617	URB1	99	64.007	Aotus_nancymaae
ENSPCIG00000016350	URB1	99	44.275	ENSACLG00000024865	urb1	99	43.897	Astatotilapia_calliptera
ENSPCIG00000016350	URB1	99	39.882	ENSAMXG00000012306	urb1	99	39.250	Astyanax_mexicanus
ENSPCIG00000016350	URB1	100	62.024	ENSBTAG00000012412	URB1	99	62.150	Bos_taurus
ENSPCIG00000016350	URB1	100	63.942	ENSCJAG00000009118	URB1	99	64.161	Callithrix_jacchus
ENSPCIG00000016350	URB1	99	65.151	ENSCAFG00000008892	URB1	99	64.786	Canis_familiaris
ENSPCIG00000016350	URB1	99	64.788	ENSCAFG00020025987	-	99	64.433	Canis_lupus_dingo
ENSPCIG00000016350	URB1	99	63.960	ENSCAFG00020025994	-	99	63.628	Canis_lupus_dingo
ENSPCIG00000016350	URB1	100	61.700	ENSCHIG00000015645	URB1	99	61.659	Capra_hircus
ENSPCIG00000016350	URB1	99	64.340	ENSTSYG00000013286	URB1	99	64.107	Carlito_syrichta
ENSPCIG00000016350	URB1	98	60.683	ENSCAPG00000015589	URB1	99	60.422	Cavia_aperea
ENSPCIG00000016350	URB1	99	61.279	ENSCPOG00000006748	URB1	99	61.053	Cavia_porcellus
ENSPCIG00000016350	URB1	100	63.792	ENSCCAG00000021299	URB1	99	63.879	Cebus_capucinus
ENSPCIG00000016350	URB1	100	64.301	ENSCATG00000042630	URB1	99	64.520	Cercocebus_atys
ENSPCIG00000016350	URB1	100	62.101	ENSCLAG00000005262	URB1	99	62.101	Chinchilla_lanigera
ENSPCIG00000016350	URB1	100	63.704	ENSCSAG00000009584	URB1	99	63.922	Chlorocebus_sabaeus
ENSPCIG00000016350	URB1	99	61.984	ENSCPBG00000006454	URB1	99	61.747	Chrysemys_picta_bellii
ENSPCIG00000016350	URB1	100	64.389	ENSCANG00000031088	URB1	99	64.608	Colobus_angolensis_palliatus
ENSPCIG00000016350	URB1	99	61.384	ENSCGRG00001010616	Urb1	99	60.999	Cricetulus_griseus_chok1gshd
ENSPCIG00000016350	URB1	98	61.316	ENSCGRG00000015840	Urb1	99	61.156	Cricetulus_griseus_crigri
ENSPCIG00000016350	URB1	99	42.124	ENSCSEG00000012616	urb1	99	41.557	Cynoglossus_semilaevis
ENSPCIG00000016350	URB1	97	50.993	ENSCVAG00000009076	urb1	99	50.993	Cyprinodon_variegatus
ENSPCIG00000016350	URB1	99	43.815	ENSDARG00000060308	urb1	99	43.298	Danio_rerio
ENSPCIG00000016350	URB1	87	65.204	ENSDNOG00000015586	URB1	99	65.204	Dasypus_novemcinctus
ENSPCIG00000016350	URB1	100	62.314	ENSDORG00000006735	Urb1	99	62.358	Dipodomys_ordii
ENSPCIG00000016350	URB1	90	70.245	ENSETEG00000009080	URB1	91	70.245	Echinops_telfairi
ENSPCIG00000016350	URB1	100	63.469	ENSEASG00005007711	URB1	99	63.469	Equus_asinus_asinus
ENSPCIG00000016350	URB1	97	71.591	ENSECAG00000013206	URB1	99	71.139	Equus_caballus
ENSPCIG00000016350	URB1	55	75.417	ENSEEUG00000003626	-	55	75.417	Erinaceus_europaeus
ENSPCIG00000016350	URB1	99	43.389	ENSELUG00000020516	urb1	99	42.870	Esox_lucius
ENSPCIG00000016350	URB1	99	63.821	ENSFCAG00000002177	URB1	99	63.433	Felis_catus
ENSPCIG00000016350	URB1	98	52.184	ENSFALG00000004636	URB1	99	52.099	Ficedula_albicollis
ENSPCIG00000016350	URB1	99	62.545	ENSFDAG00000007288	URB1	95	61.992	Fukomys_damarensis
ENSPCIG00000016350	URB1	99	40.431	ENSFHEG00000000202	urb1	99	40.503	Fundulus_heteroclitus
ENSPCIG00000016350	URB1	92	46.750	ENSGMOG00000001838	urb1	92	46.726	Gadus_morhua
ENSPCIG00000016350	URB1	99	58.480	ENSGALG00000015887	URB1	99	58.024	Gallus_gallus
ENSPCIG00000016350	URB1	96	51.717	ENSGAFG00000020694	urb1	97	51.717	Gambusia_affinis
ENSPCIG00000016350	URB1	99	44.183	ENSGACG00000011703	urb1	99	43.891	Gasterosteus_aculeatus
ENSPCIG00000016350	URB1	99	61.732	ENSGAGG00000022544	URB1	99	61.283	Gopherus_agassizii
ENSPCIG00000016350	URB1	100	63.907	ENSGGOG00000000285	URB1	99	63.995	Gorilla_gorilla
ENSPCIG00000016350	URB1	99	44.275	ENSHBUG00000001904	urb1	99	43.897	Haplochromis_burtoni
ENSPCIG00000016350	URB1	99	61.740	ENSHGLG00000004907	URB1	99	61.366	Heterocephalus_glaber_female
ENSPCIG00000016350	URB1	99	62.258	ENSHGLG00100010749	URB1	99	61.865	Heterocephalus_glaber_male
ENSPCIG00000016350	URB1	71	51.176	ENSHCOG00000018683	urb1	97	51.569	Hippocampus_comes
ENSPCIG00000016350	URB1	99	41.190	ENSIPUG00000014721	urb1	99	41.027	Ictalurus_punctatus
ENSPCIG00000016350	URB1	99	64.071	ENSSTOG00000004539	URB1	99	63.398	Ictidomys_tridecemlineatus
ENSPCIG00000016350	URB1	99	41.046	ENSKMAG00000006001	urb1	99	46.437	Kryptolebias_marmoratus
ENSPCIG00000016350	URB1	99	40.657	ENSLBEG00000027208	urb1	99	40.657	Labrus_bergylta
ENSPCIG00000016350	URB1	99	50.333	ENSLACG00000017059	URB1	100	50.129	Latimeria_chalumnae
ENSPCIG00000016350	URB1	99	45.266	ENSLOCG00000009190	urb1	99	44.610	Lepisosteus_oculatus
ENSPCIG00000016350	URB1	100	64.292	ENSLAFG00000010407	URB1	100	64.292	Loxodonta_africana
ENSPCIG00000016350	URB1	100	64.345	ENSMFAG00000034391	URB1	97	64.433	Macaca_fascicularis
ENSPCIG00000016350	URB1	100	64.126	ENSMMUG00000010295	URB1	99	64.214	Macaca_mulatta
ENSPCIG00000016350	URB1	100	62.960	ENSMNEG00000032981	URB1	99	63.047	Macaca_nemestrina
ENSPCIG00000016350	URB1	100	64.170	ENSMLEG00000041435	URB1	99	64.389	Mandrillus_leucophaeus
ENSPCIG00000016350	URB1	99	42.947	ENSMAMG00000011238	urb1	99	42.650	Mastacembelus_armatus
ENSPCIG00000016350	URB1	99	40.713	ENSMZEG00005011862	urb1	99	40.312	Maylandia_zebra
ENSPCIG00000016350	URB1	98	59.478	ENSMGAG00000014512	URB1	99	58.897	Meleagris_gallopavo
ENSPCIG00000016350	URB1	94	64.629	ENSMAUG00000010516	Urb1	99	65.211	Mesocricetus_auratus
ENSPCIG00000016350	URB1	100	63.672	ENSMICG00000016424	URB1	99	63.807	Microcebus_murinus
ENSPCIG00000016350	URB1	99	60.478	ENSMOCG00000012613	Urb1	99	60.255	Microtus_ochrogaster
ENSPCIG00000016350	URB1	100	89.863	ENSMODG00000021076	URB1	100	89.863	Monodelphis_domestica
ENSPCIG00000016350	URB1	99	41.839	ENSMALG00000017411	urb1	99	41.541	Monopterus_albus
ENSPCIG00000016350	URB1	99	60.881	MGP_CAROLIEiJ_G0020948	Urb1	99	60.736	Mus_caroli
ENSPCIG00000016350	URB1	99	61.106	ENSMUSG00000039929	Urb1	99	60.955	Mus_musculus
ENSPCIG00000016350	URB1	99	60.764	MGP_PahariEiJ_G0016653	Urb1	99	60.605	Mus_pahari
ENSPCIG00000016350	URB1	100	60.717	MGP_SPRETEiJ_G0021854	Urb1	99	60.717	Mus_spretus
ENSPCIG00000016350	URB1	100	62.867	ENSMPUG00000001123	URB1	99	62.867	Mustela_putorius_furo
ENSPCIG00000016350	URB1	99	61.311	ENSNGAG00000001905	Urb1	99	61.111	Nannospalax_galili
ENSPCIG00000016350	URB1	82	44.762	ENSNBRG00000001049	urb1	99	44.762	Neolamprologus_brichardi
ENSPCIG00000016350	URB1	99	63.051	ENSNLEG00000026872	URB1	99	62.856	Nomascus_leucogenys
ENSPCIG00000016350	URB1	93	86.807	ENSMEUG00000010828	URB1	96	83.215	Notamacropus_eugenii
ENSPCIG00000016350	URB1	100	57.853	ENSOPRG00000013482	URB1	100	57.766	Ochotona_princeps
ENSPCIG00000016350	URB1	99	61.995	ENSODEG00000002587	URB1	99	61.620	Octodon_degus
ENSPCIG00000016350	URB1	99	44.136	ENSONIG00000005599	urb1	99	43.761	Oreochromis_niloticus
ENSPCIG00000016350	URB1	99	62.674	ENSOCUG00000009381	URB1	99	62.297	Oryctolagus_cuniculus
ENSPCIG00000016350	URB1	99	43.018	ENSORLG00000003429	urb1	99	42.625	Oryzias_latipes
ENSPCIG00000016350	URB1	99	43.275	ENSORLG00020013785	urb1	99	42.838	Oryzias_latipes_hni
ENSPCIG00000016350	URB1	91	50.420	ENSORLG00015019421	urb1	98	50.420	Oryzias_latipes_hsok
ENSPCIG00000016350	URB1	79	50.468	ENSOMEG00000002094	urb1	98	49.649	Oryzias_melastigma
ENSPCIG00000016350	URB1	100	63.688	ENSOGAG00000017140	URB1	99	63.688	Otolemur_garnettii
ENSPCIG00000016350	URB1	97	63.091	ENSOARG00000013679	URB1	99	63.091	Ovis_aries
ENSPCIG00000016350	URB1	100	64.520	ENSPPAG00000003423	URB1	99	64.608	Pan_paniscus
ENSPCIG00000016350	URB1	99	63.731	ENSPPRG00000023131	URB1	99	63.433	Panthera_pardus
ENSPCIG00000016350	URB1	92	63.315	ENSPTIG00000016125	URB1	98	63.462	Panthera_tigris_altaica
ENSPCIG00000016350	URB1	100	64.433	ENSPTRG00000013852	URB1	99	64.520	Pan_troglodytes
ENSPCIG00000016350	URB1	100	64.258	ENSPANG00000021964	URB1	99	64.477	Papio_anubis
ENSPCIG00000016350	URB1	99	44.540	ENSPKIG00000003683	urb1	98	44.391	Paramormyrops_kingsleyae
ENSPCIG00000016350	URB1	99	61.269	ENSPEMG00000021205	Urb1	99	61.157	Peromyscus_maniculatus_bairdii
ENSPCIG00000016350	URB1	81	32.275	ENSPMAG00000009733	URB1	100	33.059	Petromyzon_marinus
ENSPCIG00000016350	URB1	97	42.508	ENSPLAG00000004371	urb1	99	42.541	Poecilia_latipinna
ENSPCIG00000016350	URB1	99	43.324	ENSPMEG00000006634	urb1	99	42.977	Poecilia_mexicana
ENSPCIG00000016350	URB1	99	43.323	ENSPREG00000013453	urb1	99	42.876	Poecilia_reticulata
ENSPCIG00000016350	URB1	99	64.205	ENSPPYG00000011359	URB1	99	63.935	Pongo_abelii
ENSPCIG00000016350	URB1	99	55.712	ENSPCAG00000007430	URB1	99	55.341	Procavia_capensis
ENSPCIG00000016350	URB1	100	64.270	ENSPCOG00000022695	URB1	99	64.536	Propithecus_coquereli
ENSPCIG00000016350	URB1	99	63.210	ENSPVAG00000000889	URB1	99	62.906	Pteropus_vampyrus
ENSPCIG00000016350	URB1	99	43.532	ENSPNYG00000010589	urb1	99	42.770	Pundamilia_nyererei
ENSPCIG00000016350	URB1	99	41.031	ENSPNAG00000019324	urb1	99	40.822	Pygocentrus_nattereri
ENSPCIG00000016350	URB1	99	61.528	ENSRNOG00000002080	Urb1	99	61.279	Rattus_norvegicus
ENSPCIG00000016350	URB1	100	64.301	ENSRBIG00000033122	URB1	99	64.608	Rhinopithecus_bieti
ENSPCIG00000016350	URB1	100	64.301	ENSRROG00000040237	URB1	99	64.608	Rhinopithecus_roxellana
ENSPCIG00000016350	URB1	99	63.923	ENSSBOG00000027672	URB1	99	63.875	Saimiri_boliviensis_boliviensis
ENSPCIG00000016350	URB1	100	89.455	ENSSHAG00000005140	URB1	100	89.511	Sarcophilus_harrisii
ENSPCIG00000016350	URB1	95	45.626	ENSSFOG00015000339	urb1	99	45.532	Scleropages_formosus
ENSPCIG00000016350	URB1	99	43.100	ENSSMAG00000003782	urb1	99	42.913	Scophthalmus_maximus
ENSPCIG00000016350	URB1	99	44.127	ENSSDUG00000012313	urb1	99	43.810	Seriola_dumerili
ENSPCIG00000016350	URB1	99	43.987	ENSSLDG00000023179	urb1	99	43.810	Seriola_lalandi_dorsalis
ENSPCIG00000016350	URB1	99	58.446	ENSSPUG00000012447	URB1	99	57.904	Sphenodon_punctatus
ENSPCIG00000016350	URB1	99	44.151	ENSSPAG00000006325	urb1	99	43.728	Stegastes_partitus
ENSPCIG00000016350	URB1	100	61.711	ENSSSCG00000032024	URB1	99	61.711	Sus_scrofa
ENSPCIG00000016350	URB1	75	59.618	ENSTGUG00000013442	URB1	100	59.618	Taeniopygia_guttata
ENSPCIG00000016350	URB1	99	43.083	ENSTRUG00000009372	urb1	99	42.794	Takifugu_rubripes
ENSPCIG00000016350	URB1	99	42.170	ENSTNIG00000016277	urb1	99	41.777	Tetraodon_nigroviridis
ENSPCIG00000016350	URB1	81	70.435	ENSTBEG00000010044	URB1	80	70.435	Tupaia_belangeri
ENSPCIG00000016350	URB1	91	65.485	ENSTTRG00000007712	URB1	92	65.485	Tursiops_truncatus
ENSPCIG00000016350	URB1	99	63.809	ENSUAMG00000012231	URB1	99	63.393	Ursus_americanus
ENSPCIG00000016350	URB1	92	64.453	ENSUMAG00000017419	URB1	98	64.453	Ursus_maritimus
ENSPCIG00000016350	URB1	68	80.159	ENSVPAG00000001164	URB1	68	80.159	Vicugna_pacos
ENSPCIG00000016350	URB1	99	64.955	ENSVVUG00000000551	URB1	99	64.551	Vulpes_vulpes
ENSPCIG00000016350	URB1	99	52.160	ENSXETG00000009895	urb1	99	51.749	Xenopus_tropicalis
ENSPCIG00000016350	URB1	99	41.350	ENSXCOG00000005500	urb1	97	45.549	Xiphophorus_couchianus
ENSPCIG00000016350	URB1	99	41.451	ENSXMAG00000007253	urb1	97	45.729	Xiphophorus_maculatus