EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000016995 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 3723 bases
Position: chrFUWB01000722.1:5779-9501
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000022409	PABP	PF00658.18	8e-30	1	1
ENSPCIP00000022409	RRM_5	PF13893.6	8e-08	1	1
ENSPCIP00000022409	RRM_1	PF00076.22	1.1e-80	1	4
ENSPCIP00000022409	RRM_1	PF00076.22	1.1e-80	2	4
ENSPCIP00000022409	RRM_1	PF00076.22	1.1e-80	3	4
ENSPCIP00000022409	RRM_1	PF00076.22	1.1e-80	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000027628	-	3723	-	ENSPCIP00000022409	1157 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000016995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000016995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000016995	-	55	62.557	ENSPCIG00000016154	-	99	62.557
ENSPCIG00000016995	-	55	61.085	ENSPCIG00000006048	-	98	61.085
ENSPCIG00000016995	-	54	60.289	ENSPCIG00000009392	PABPC1L	98	60.289
ENSPCIG00000016995	-	54	73.404	ENSPCIG00000000267	-	99	80.000
ENSPCIG00000016995	-	54	66.292	ENSPCIG00000020674	PABPC4	98	74.576

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000016995	-	55	72.266	ENSAPOG00000015105	pabpc1a	99	72.266	Acanthochromis_polyacanthus
ENSPCIG00000016995	-	55	70.701	ENSAPOG00000017776	pabpc1b	99	70.701	Acanthochromis_polyacanthus
ENSPCIG00000016995	-	55	71.791	ENSACIG00000004685	pabpc1a	99	71.791	Amphilophus_citrinellus
ENSPCIG00000016995	-	55	69.745	ENSACIG00000018366	pabpc1b	99	69.936	Amphilophus_citrinellus
ENSPCIG00000016995	-	55	70.701	ENSAOCG00000019839	pabpc1b	99	70.701	Amphiprion_ocellaris
ENSPCIG00000016995	-	55	71.930	ENSAOCG00000011656	pabpc1a	99	71.949	Amphiprion_ocellaris
ENSPCIG00000016995	-	55	70.701	ENSAPEG00000010435	pabpc1b	99	70.701	Amphiprion_percula
ENSPCIG00000016995	-	55	71.930	ENSAPEG00000006963	pabpc1a	99	71.949	Amphiprion_percula
ENSPCIG00000016995	-	55	71.770	ENSATEG00000024852	pabpc1a	99	71.791	Anabas_testudineus
ENSPCIG00000016995	-	55	70.429	ENSATEG00000012917	pabpc1b	99	70.429	Anabas_testudineus
ENSPCIG00000016995	-	55	76.606	ENSACLG00000009399	pabpc1a	99	76.606	Astatotilapia_calliptera
ENSPCIG00000016995	-	55	70.860	ENSACLG00000014335	pabpc1b	99	70.860	Astatotilapia_calliptera
ENSPCIG00000016995	-	55	70.860	ENSAMXG00000008599	pabpc1b	99	71.224	Astyanax_mexicanus
ENSPCIG00000016995	-	54	72.285	ENSCSEG00000013324	pabpc1a	99	72.303	Cynoglossus_semilaevis
ENSPCIG00000016995	-	54	71.613	ENSCSEG00000015241	-	98	71.613	Cynoglossus_semilaevis
ENSPCIG00000016995	-	54	70.635	ENSCVAG00000005489	pabpc1b	99	70.635	Cyprinodon_variegatus
ENSPCIG00000016995	-	55	71.474	ENSCVAG00000021872	pabpc1a	99	71.474	Cyprinodon_variegatus
ENSPCIG00000016995	-	55	70.860	ENSDARG00000021140	pabpc1b	99	74.820	Danio_rerio
ENSPCIG00000016995	-	55	71.406	ENSDARG00000017219	pabpc1a	99	71.746	Danio_rerio
ENSPCIG00000016995	-	54	70.747	ENSELUG00000015062	-	99	70.747	Esox_lucius
ENSPCIG00000016995	-	53	72.258	ENSELUG00000003614	pabpc1a	98	72.258	Esox_lucius
ENSPCIG00000016995	-	55	71.746	ENSFHEG00000018979	pabpc1a	99	71.791	Fundulus_heteroclitus
ENSPCIG00000016995	-	54	71.292	ENSFHEG00000008186	pabpc1b	99	71.860	Fundulus_heteroclitus
ENSPCIG00000016995	-	54	66.083	ENSGMOG00000002448	-	98	66.083	Gadus_morhua
ENSPCIG00000016995	-	55	70.846	ENSGMOG00000013448	pabpc1a	99	70.846	Gadus_morhua
ENSPCIG00000016995	-	54	70.673	ENSGAFG00000010193	pabpc1b	99	71.178	Gambusia_affinis
ENSPCIG00000016995	-	55	71.429	ENSGAFG00000019750	pabpc1a	99	71.791	Gambusia_affinis
ENSPCIG00000016995	-	55	71.949	ENSGACG00000003572	pabpc1a	99	71.949	Gasterosteus_aculeatus
ENSPCIG00000016995	-	55	68.790	ENSGACG00000003771	pabpc1b	98	68.998	Gasterosteus_aculeatus
ENSPCIG00000016995	-	55	70.860	ENSHBUG00000002075	pabpc1b	99	70.860	Haplochromis_burtoni
ENSPCIG00000016995	-	55	76.606	ENSHBUG00000020487	pabpc1a	99	76.606	Haplochromis_burtoni
ENSPCIG00000016995	-	55	71.451	ENSHCOG00000013502	pabpc1a	99	71.474	Hippocampus_comes
ENSPCIG00000016995	-	53	62.175	ENSHCOG00000003175	pabpc1b	98	76.543	Hippocampus_comes
ENSPCIG00000016995	-	55	69.453	ENSIPUG00000010791	-	99	69.453	Ictalurus_punctatus
ENSPCIG00000016995	-	55	71.061	ENSIPUG00000008848	pabpc1a	99	71.200	Ictalurus_punctatus
ENSPCIG00000016995	-	55	72.425	ENSKMAG00000000605	pabpc1a	99	72.425	Kryptolebias_marmoratus
ENSPCIG00000016995	-	55	70.900	ENSKMAG00000008049	pabpc1b	99	71.200	Kryptolebias_marmoratus
ENSPCIG00000016995	-	55	71.632	ENSLBEG00000024002	-	99	71.632	Labrus_bergylta
ENSPCIG00000016995	-	55	70.382	ENSLBEG00000026845	pabpc1b	99	70.382	Labrus_bergylta
ENSPCIG00000016995	-	55	76.376	ENSMAMG00000004502	-	99	76.376	Mastacembelus_armatus
ENSPCIG00000016995	-	55	71.338	ENSMAMG00000014610	pabpc1b	99	71.338	Mastacembelus_armatus
ENSPCIG00000016995	-	55	70.860	ENSMZEG00005026745	pabpc1b	99	70.860	Maylandia_zebra
ENSPCIG00000016995	-	55	76.606	ENSMZEG00005025416	pabpc1a	99	76.606	Maylandia_zebra
ENSPCIG00000016995	-	54	70.213	ENSMMOG00000018044	pabpc1a	98	78.889	Mola_mola
ENSPCIG00000016995	-	54	68.328	ENSMMOG00000018009	pabpc1b	98	68.971	Mola_mola
ENSPCIG00000016995	-	55	72.283	ENSMODG00000013156	-	100	72.598	Monodelphis_domestica
ENSPCIG00000016995	-	55	62.520	ENSMODG00000015024	-	99	62.520	Monodelphis_domestica
ENSPCIG00000016995	-	55	71.770	ENSMALG00000013020	-	99	71.791	Monopterus_albus
ENSPCIG00000016995	-	55	69.404	ENSMALG00000006066	pabpc1b	98	69.404	Monopterus_albus
ENSPCIG00000016995	-	55	76.606	ENSNBRG00000003068	-	99	76.606	Neolamprologus_brichardi
ENSPCIG00000016995	-	55	71.019	ENSNBRG00000013737	pabpc1b	99	71.019	Neolamprologus_brichardi
ENSPCIG00000016995	-	55	70.860	ENSONIG00000002717	pabpc1b	99	70.860	Oreochromis_niloticus
ENSPCIG00000016995	-	55	71.791	ENSONIG00000006871	-	99	71.791	Oreochromis_niloticus
ENSPCIG00000016995	-	55	71.451	ENSORLG00000002691	pabpc1a	95	79.452	Oryzias_latipes
ENSPCIG00000016995	-	55	68.413	ENSORLG00000003008	-	99	68.413	Oryzias_latipes
ENSPCIG00000016995	-	55	71.611	ENSORLG00020022398	pabpc1a	99	71.746	Oryzias_latipes_hni
ENSPCIG00000016995	-	55	68.800	ENSORLG00020022259	-	99	68.800	Oryzias_latipes_hni
ENSPCIG00000016995	-	55	68.960	ENSORLG00015010932	-	99	68.960	Oryzias_latipes_hsok
ENSPCIG00000016995	-	55	71.451	ENSORLG00015013633	pabpc1	99	71.587	Oryzias_latipes_hsok
ENSPCIG00000016995	-	55	71.611	ENSOMEG00000020219	pabpc1a	99	71.632	Oryzias_melastigma
ENSPCIG00000016995	-	55	70.860	ENSPKIG00000005676	pabpc1b	99	70.860	Paramormyrops_kingsleyae
ENSPCIG00000016995	-	54	70.880	ENSPFOG00000005917	pabpc1b	99	71.383	Poecilia_formosa
ENSPCIG00000016995	-	55	70.892	ENSPFOG00000010815	pabpc1a	99	71.094	Poecilia_formosa
ENSPCIG00000016995	-	54	71.040	ENSPLAG00000001388	pabpc1b	99	71.542	Poecilia_latipinna
ENSPCIG00000016995	-	55	71.905	ENSPLAG00000004114	pabpc1a	99	72.108	Poecilia_latipinna
ENSPCIG00000016995	-	55	71.905	ENSPMEG00000001334	pabpc1a	99	72.108	Poecilia_mexicana
ENSPCIG00000016995	-	54	70.880	ENSPMEG00000014399	pabpc1b	99	71.383	Poecilia_mexicana
ENSPCIG00000016995	-	55	78.810	ENSPREG00000019595	pabpc1a	96	83.486	Poecilia_reticulata
ENSPCIG00000016995	-	54	71.040	ENSPREG00000010911	pabpc1b	99	71.542	Poecilia_reticulata
ENSPCIG00000016995	-	55	71.949	ENSPNYG00000005192	pabpc1a	99	71.949	Pundamilia_nyererei
ENSPCIG00000016995	-	55	70.860	ENSPNYG00000012578	pabpc1b	99	70.860	Pundamilia_nyererei
ENSPCIG00000016995	-	54	72.071	ENSPNAG00000028408	pabpc1a	99	72.071	Pygocentrus_nattereri
ENSPCIG00000016995	-	55	71.065	ENSPNAG00000024626	pabpc1b	99	71.065	Pygocentrus_nattereri
ENSPCIG00000016995	-	54	63.622	ENSSHAG00000000511	-	99	63.622	Sarcophilus_harrisii
ENSPCIG00000016995	-	55	70.175	ENSSFOG00015006662	pabpc1a	99	70.541	Scleropages_formosus
ENSPCIG00000016995	-	55	71.451	ENSSFOG00015002752	-	99	71.451	Scleropages_formosus
ENSPCIG00000016995	-	55	70.223	ENSSMAG00000006869	pabpc1b	98	70.223	Scophthalmus_maximus
ENSPCIG00000016995	-	55	71.632	ENSSMAG00000010803	pabpc1a	99	71.632	Scophthalmus_maximus
ENSPCIG00000016995	-	55	71.632	ENSSDUG00000006675	pabpc1a	99	71.632	Seriola_dumerili
ENSPCIG00000016995	-	55	71.242	ENSSDUG00000011965	pabpc1b	98	71.242	Seriola_dumerili
ENSPCIG00000016995	-	54	71.136	ENSSLDG00000014156	pabpc1b	99	71.136	Seriola_lalandi_dorsalis
ENSPCIG00000016995	-	55	71.632	ENSSLDG00000011661	pabpc1a	99	71.632	Seriola_lalandi_dorsalis
ENSPCIG00000016995	-	55	71.542	ENSSPAG00000019265	pabpc1b	99	71.542	Stegastes_partitus
ENSPCIG00000016995	-	55	71.930	ENSSPAG00000014453	-	99	71.949	Stegastes_partitus
ENSPCIG00000016995	-	55	70.681	ENSTRUG00000011577	-	99	70.840	Takifugu_rubripes
ENSPCIG00000016995	-	55	68.471	ENSTRUG00000003767	-	99	68.839	Takifugu_rubripes
ENSPCIG00000016995	-	55	69.702	ENSTNIG00000013307	pabpc1a	98	69.859	Tetraodon_nigroviridis
ENSPCIG00000016995	-	55	69.268	ENSTNIG00000009153	pabpc1b	99	69.268	Tetraodon_nigroviridis
ENSPCIG00000016995	-	52	51.227	ENSUMAG00000023926	-	89	63.260	Ursus_maritimus
ENSPCIG00000016995	-	53	42.117	ENSXETG00000015439	-	99	42.117	Xenopus_tropicalis
ENSPCIG00000016995	-	54	69.243	ENSXCOG00000019901	pabpc1b	99	69.243	Xiphophorus_couchianus
ENSPCIG00000016995	-	55	69.775	ENSXCOG00000017066	pabpc1a	99	69.936	Xiphophorus_couchianus
ENSPCIG00000016995	-	55	71.429	ENSXMAG00000002555	pabpc1a	99	71.474	Xiphophorus_maculatus
ENSPCIG00000016995	-	54	70.513	ENSXMAG00000003753	pabpc1b	89	81.421	Xiphophorus_maculatus