EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPCIG00000017170 (Gene tree)
Gene ID
110205195
Gene Symbol
YTHDF1
Alias
-
Full Name
YTH N6-methyladenosine RNA binding protein 1
Gene Type
protein_coding
Species
Phascolarctos_cinereus
Status
putative
Strand
Plus strand
Length
22909 bases
Position
chrFUWB01001239.1:499197-522105
Accession
110205195
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCIP00000022635YTHPF04146.157.1e-4211
ENSPCIP00000022634YTHPF04146.157.1e-4211
ENSPCIP00000022632YTHPF04146.157.6e-4211
ENSPCIP00000022630YTHPF04146.158.8e-4211
ENSPCIP00000022629YTHPF04146.159.4e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCIT00000027923YTHDF1-2032219-ENSPCIP00000022632530 (aa)--
ENSPCIT00000027920YTHDF1-2011897-ENSPCIP00000022629595 (aa)XP_020837216UPI000A28B0C0
ENSPCIT00000027921YTHDF1-2021852-ENSPCIP00000022630580 (aa)XP_020837218UPI000A28A950
ENSPCIT00000027926YTHDF1-2052074-ENSPCIP00000022635518 (aa)--
ENSPCIT00000027925YTHDF1-2042084-ENSPCIP00000022634510 (aa)--
Gene Model
Click here to download ENSPCIG00000017170's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000017170's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPCIG00000017170YTHDF19966.359ENSPCIG00000022413YTHDF29965.299
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCIG00000017170YTHDF110089.432ENSG00000149658YTHDF19988.448Homo_sapiens
ENSPCIG00000017170YTHDF19675.246ENSAPOG00000004358ythdf19974.483Acanthochromis_polyacanthus
ENSPCIG00000017170YTHDF110077.925ENSAPOG00000010796YTHDF19976.224Acanthochromis_polyacanthus
ENSPCIG00000017170YTHDF110087.671ENSAMEG00000017323YTHDF19789.744Ailuropoda_melanoleuca
ENSPCIG00000017170YTHDF19673.705ENSACIG00000011264ythdf19872.251Amphilophus_citrinellus
ENSPCIG00000017170YTHDF110075.332ENSACIG00000020083YTHDF19974.695Amphilophus_citrinellus
ENSPCIG00000017170YTHDF110076.718ENSAOCG00000012567YTHDF19975.309Amphiprion_ocellaris
ENSPCIG00000017170YTHDF19972.344ENSAOCG00000022251ythdf19973.997Amphiprion_ocellaris
ENSPCIG00000017170YTHDF110076.908ENSAPEG00000008750YTHDF19975.485Amphiprion_percula
ENSPCIG00000017170YTHDF19672.128ENSAPEG00000021878ythdf19772.788Amphiprion_percula
ENSPCIG00000017170YTHDF19674.506ENSATEG00000023840ythdf19973.776Anabas_testudineus
ENSPCIG00000017170YTHDF110076.145ENSATEG00000005996YTHDF19974.912Anabas_testudineus
ENSPCIG00000017170YTHDF110095.108ENSAPLG00000005985YTHDF19894.364Anas_platyrhynchos
ENSPCIG00000017170YTHDF110089.628ENSACAG00000005560YTHDF19991.892Anolis_carolinensis
ENSPCIG00000017170YTHDF19973.622ENSANAG00000021022-9975.135Aotus_nancymaae
ENSPCIG00000017170YTHDF110089.432ENSANAG00000034786-10089.041Aotus_nancymaae
ENSPCIG00000017170YTHDF110076.718ENSACLG00000025518YTHDF19975.309Astatotilapia_calliptera
ENSPCIG00000017170YTHDF110085.323ENSBTAG00000010383YTHDF110085.714Bos_taurus
ENSPCIG00000017170YTHDF110089.628ENSCJAG00000010056YTHDF19988.448Callithrix_jacchus
ENSPCIG00000017170YTHDF19990.588ENSCAFG00000012772YTHDF19989.412Canis_familiaris
ENSPCIG00000017170YTHDF19990.588ENSCAFG00020001214YTHDF19989.412Canis_lupus_dingo
ENSPCIG00000017170YTHDF110084.540ENSCHIG00000026494YTHDF19986.462Capra_hircus
ENSPCIG00000017170YTHDF110089.041ENSTSYG00000033436YTHDF19886.594Carlito_syrichta
ENSPCIG00000017170YTHDF19988.409ENSCAPG00000002544YTHDF19387.593Cavia_aperea
ENSPCIG00000017170YTHDF110089.041ENSCPOG00000010202YTHDF19988.448Cavia_porcellus
ENSPCIG00000017170YTHDF110088.258ENSCCAG00000024650YTHDF19988.267Cebus_capucinus
ENSPCIG00000017170YTHDF110090.215ENSCATG00000033272YTHDF19988.989Cercocebus_atys
ENSPCIG00000017170YTHDF110090.215ENSCLAG00000005989YTHDF19990.253Chinchilla_lanigera
ENSPCIG00000017170YTHDF110090.215ENSCSAG00000016266YTHDF19988.989Chlorocebus_sabaeus
ENSPCIG00000017170YTHDF110094.521ENSCPBG00000027183YTHDF19993.682Chrysemys_picta_bellii
ENSPCIG00000017170YTHDF110090.020ENSCANG00000029082YTHDF19788.828Colobus_angolensis_palliatus
ENSPCIG00000017170YTHDF110090.998ENSCGRG00001016568Ythdf19989.892Cricetulus_griseus_chok1gshd
ENSPCIG00000017170YTHDF110090.998ENSCGRG00000009207Ythdf19989.725Cricetulus_griseus_crigri
ENSPCIG00000017170YTHDF19674.749ENSCSEG00000020623YTHDF19975.223Cynoglossus_semilaevis
ENSPCIG00000017170YTHDF19872.780ENSCVAG00000017940ythdf19871.378Cyprinodon_variegatus
ENSPCIG00000017170YTHDF110074.953ENSCVAG00000014378YTHDF19876.044Cyprinodon_variegatus
ENSPCIG00000017170YTHDF110070.702ENSDARG00000016447ythdf19774.916Danio_rerio
ENSPCIG00000017170YTHDF110088.650ENSDNOG00000043590YTHDF19988.087Dasypus_novemcinctus
ENSPCIG00000017170YTHDF110085.127ENSDORG00000002879Ythdf19982.343Dipodomys_ordii
ENSPCIG00000017170YTHDF17666.013ENSETEG00000017860-9968.657Echinops_telfairi
ENSPCIG00000017170YTHDF110087.867ENSEASG00005023186YTHDF19989.531Equus_asinus_asinus
ENSPCIG00000017170YTHDF110087.671ENSECAG00000019475YTHDF110089.237Equus_caballus
ENSPCIG00000017170YTHDF110089.628ENSEEUG00000007461YTHDF19989.041Erinaceus_europaeus
ENSPCIG00000017170YTHDF19974.254ENSELUG00000022768ythdf19974.614Esox_lucius
ENSPCIG00000017170YTHDF110074.528ENSELUG00000001906YTHDF19974.164Esox_lucius
ENSPCIG00000017170YTHDF110086.497ENSFCAG00000008917YTHDF19988.448Felis_catus
ENSPCIG00000017170YTHDF110094.521ENSFALG00000010463YTHDF19993.321Ficedula_albicollis
ENSPCIG00000017170YTHDF110087.867ENSFDAG00000019602YTHDF19987.365Fukomys_damarensis
ENSPCIG00000017170YTHDF110075.332ENSFHEG00000002540YTHDF19875.499Fundulus_heteroclitus
ENSPCIG00000017170YTHDF19873.359ENSFHEG00000023218ythdf19971.958Fundulus_heteroclitus
ENSPCIG00000017170YTHDF18491.710ENSGMOG00000019610ythdf19671.356Gadus_morhua
ENSPCIG00000017170YTHDF110094.912ENSGALG00000005745YTHDF110094.912Gallus_gallus
ENSPCIG00000017170YTHDF110074.476ENSGAFG00000021100YTHDF19876.044Gambusia_affinis
ENSPCIG00000017170YTHDF110074.492ENSGACG00000002613YTHDF19973.288Gasterosteus_aculeatus
ENSPCIG00000017170YTHDF19673.308ENSGACG00000012014ythdf19673.630Gasterosteus_aculeatus
ENSPCIG00000017170YTHDF110094.912ENSGAGG00000003007YTHDF19993.863Gopherus_agassizii
ENSPCIG00000017170YTHDF110089.824ENSGGOG00000008340YTHDF19988.628Gorilla_gorilla
ENSPCIG00000017170YTHDF110076.718ENSHBUG00000004875YTHDF19975.309Haplochromis_burtoni
ENSPCIG00000017170YTHDF19674.409ENSHBUG00000011284ythdf110073.208Haplochromis_burtoni
ENSPCIG00000017170YTHDF110088.650ENSHGLG00000006585YTHDF19987.726Heterocephalus_glaber_female
ENSPCIG00000017170YTHDF110088.650ENSHGLG00100004683YTHDF19987.726Heterocephalus_glaber_male
ENSPCIG00000017170YTHDF19972.325ENSHCOG00000008866ythdf19972.437Hippocampus_comes
ENSPCIG00000017170YTHDF110075.142ENSHCOG00000011303YTHDF19975.281Hippocampus_comes
ENSPCIG00000017170YTHDF110077.457ENSIPUG00000000425Ythdf19675.912Ictalurus_punctatus
ENSPCIG00000017170YTHDF110089.628ENSSTOG00000023001YTHDF19988.645Ictidomys_tridecemlineatus
ENSPCIG00000017170YTHDF110091.194ENSJJAG00000013589Ythdf19989.908Jaculus_jaculus
ENSPCIG00000017170YTHDF110075.947ENSKMAG00000017472YTHDF19876.087Kryptolebias_marmoratus
ENSPCIG00000017170YTHDF19672.475ENSKMAG00000005595ythdf19972.456Kryptolebias_marmoratus
ENSPCIG00000017170YTHDF110076.981ENSLBEG00000012068YTHDF19975.874Labrus_bergylta
ENSPCIG00000017170YTHDF19673.810ENSLBEG00000014105ythdf19872.680Labrus_bergylta
ENSPCIG00000017170YTHDF19983.562ENSLACG00000014195YTHDF19885.872Latimeria_chalumnae
ENSPCIG00000017170YTHDF110079.699ENSLOCG00000005020ythdf19780.179Lepisosteus_oculatus
ENSPCIG00000017170YTHDF110089.824ENSLAFG00000008884YTHDF19988.809Loxodonta_africana
ENSPCIG00000017170YTHDF110090.215ENSMFAG00000042868YTHDF19988.989Macaca_fascicularis
ENSPCIG00000017170YTHDF110090.215ENSMMUG00000009227YTHDF19988.989Macaca_mulatta
ENSPCIG00000017170YTHDF110090.215ENSMNEG00000030851YTHDF19988.989Macaca_nemestrina
ENSPCIG00000017170YTHDF110090.215ENSMLEG00000009252YTHDF19988.991Mandrillus_leucophaeus
ENSPCIG00000017170YTHDF19673.518ENSMAMG00000024255ythdf19973.333Mastacembelus_armatus
ENSPCIG00000017170YTHDF110077.040ENSMAMG00000011072YTHDF19975.747Mastacembelus_armatus
ENSPCIG00000017170YTHDF19674.409ENSMZEG00005026397ythdf110074.221Maylandia_zebra
ENSPCIG00000017170YTHDF110076.718ENSMZEG00005023596YTHDF19975.309Maylandia_zebra
ENSPCIG00000017170YTHDF110094.912ENSMGAG00000006139YTHDF19893.841Meleagris_gallopavo
ENSPCIG00000017170YTHDF110091.389ENSMAUG00000017660Ythdf19990.253Mesocricetus_auratus
ENSPCIG00000017170YTHDF110089.041ENSMICG00000032266YTHDF19988.087Microcebus_murinus
ENSPCIG00000017170YTHDF110090.411ENSMOCG00000013573Ythdf19989.531Microtus_ochrogaster
ENSPCIG00000017170YTHDF19669.549ENSMMOG00000017500ythdf19770.134Mola_mola
ENSPCIG00000017170YTHDF19972.252ENSMMOG00000020467YTHDF19672.194Mola_mola
ENSPCIG00000017170YTHDF110099.020ENSMODG00000016842YTHDF110099.020Monodelphis_domestica
ENSPCIG00000017170YTHDF19672.584ENSMALG00000015672ythdf19773.509Monopterus_albus
ENSPCIG00000017170YTHDF110076.226ENSMALG00000022209YTHDF19975.614Monopterus_albus
ENSPCIG00000017170YTHDF110090.802MGP_CAROLIEiJ_G0024790Ythdf19989.531Mus_caroli
ENSPCIG00000017170YTHDF110090.802ENSMUSG00000038848Ythdf19989.531Mus_musculus
ENSPCIG00000017170YTHDF110090.802MGP_PahariEiJ_G0026237Ythdf19989.531Mus_pahari
ENSPCIG00000017170YTHDF110090.802MGP_SPRETEiJ_G0025715Ythdf19989.531Mus_spretus
ENSPCIG00000017170YTHDF110085.127ENSMPUG00000008111YTHDF110085.127Mustela_putorius_furo
ENSPCIG00000017170YTHDF110088.650ENSMLUG00000002241YTHDF19587.523Myotis_lucifugus
ENSPCIG00000017170YTHDF110090.998ENSNGAG00000000334Ythdf19990.072Nannospalax_galili
ENSPCIG00000017170YTHDF110076.718ENSNBRG00000015321YTHDF19975.309Neolamprologus_brichardi
ENSPCIG00000017170YTHDF19971.238ENSNBRG00000008213ythdf19971.875Neolamprologus_brichardi
ENSPCIG00000017170YTHDF19876.938ENSOPRG00000001758-9976.548Ochotona_princeps
ENSPCIG00000017170YTHDF18782.143ENSODEG00000000074-9973.310Octodon_degus
ENSPCIG00000017170YTHDF110088.845ENSODEG00000004380-9988.989Octodon_degus
ENSPCIG00000017170YTHDF19671.839ENSONIG00000016799ythdf19972.666Oreochromis_niloticus
ENSPCIG00000017170YTHDF110095.695ENSOANG00000003723YTHDF19996.029Ornithorhynchus_anatinus
ENSPCIG00000017170YTHDF110079.648ENSOCUG00000012780YTHDF19978.456Oryctolagus_cuniculus
ENSPCIG00000017170YTHDF19671.839ENSORLG00000014665YTHDF19772.081Oryzias_latipes
ENSPCIG00000017170YTHDF110075.285ENSORLG00000009739YTHDF19876.044Oryzias_latipes
ENSPCIG00000017170YTHDF110076.301ENSORLG00020001332YTHDF19876.838Oryzias_latipes_hni
ENSPCIG00000017170YTHDF19672.222ENSORLG00020000307ythdf19772.542Oryzias_latipes_hni
ENSPCIG00000017170YTHDF110074.905ENSORLG00015018321YTHDF19875.681Oryzias_latipes_hsok
ENSPCIG00000017170YTHDF19672.222ENSORLG00015006302ythdf19772.542Oryzias_latipes_hsok
ENSPCIG00000017170YTHDF19673.870ENSOMEG00000002941YTHDF19973.462Oryzias_melastigma
ENSPCIG00000017170YTHDF110071.504ENSOMEG00000011843YTHDF19772.896Oryzias_melastigma
ENSPCIG00000017170YTHDF110087.476ENSOGAG00000000480YTHDF19986.462Otolemur_garnettii
ENSPCIG00000017170YTHDF110081.213ENSOARG00000011639YTHDF19782.234Ovis_aries
ENSPCIG00000017170YTHDF110089.824ENSPPAG00000023277YTHDF19988.645Pan_paniscus
ENSPCIG00000017170YTHDF110086.888ENSPPRG00000020805YTHDF19988.809Panthera_pardus
ENSPCIG00000017170YTHDF110071.345ENSPTIG00000017355YTHDF19879.853Panthera_tigris_altaica
ENSPCIG00000017170YTHDF110089.824ENSPTRG00000013730YTHDF19988.628Pan_troglodytes
ENSPCIG00000017170YTHDF110090.215ENSPANG00000021472YTHDF19988.989Papio_anubis
ENSPCIG00000017170YTHDF19873.190ENSPKIG00000005026YTHDF19872.647Paramormyrops_kingsleyae
ENSPCIG00000017170YTHDF110069.714ENSPKIG00000005427ythdf19970.660Paramormyrops_kingsleyae
ENSPCIG00000017170YTHDF19995.635ENSPSIG00000005529YTHDF19895.255Pelodiscus_sinensis
ENSPCIG00000017170YTHDF110074.954ENSPMGG00000009101YTHDF19874.739Periophthalmus_magnuspinnatus
ENSPCIG00000017170YTHDF19672.062ENSPMGG00000015328ythdf19773.145Periophthalmus_magnuspinnatus
ENSPCIG00000017170YTHDF110090.607ENSPEMG00000020199Ythdf19989.366Peromyscus_maniculatus_bairdii
ENSPCIG00000017170YTHDF19971.455ENSPFOG00000005405ythdf19870.451Poecilia_formosa
ENSPCIG00000017170YTHDF19873.745ENSPLAG00000006653ythdf19973.462Poecilia_latipinna
ENSPCIG00000017170YTHDF110071.030ENSPLAG00000006298YTHDF19773.167Poecilia_latipinna
ENSPCIG00000017170YTHDF110075.238ENSPMEG00000020969-9974.603Poecilia_mexicana
ENSPCIG00000017170YTHDF19873.501ENSPMEG00000023753ythdf19972.310Poecilia_mexicana
ENSPCIG00000017170YTHDF19873.256ENSPREG00000002173ythdf19972.792Poecilia_reticulata
ENSPCIG00000017170YTHDF110070.783ENSPREG00000017662YTHDF19572.165Poecilia_reticulata
ENSPCIG00000017170YTHDF18796.020ENSPPYG00000011226YTHDF19995.361Pongo_abelii
ENSPCIG00000017170YTHDF19684.114ENSPCAG00000002452YTHDF110083.497Procavia_capensis
ENSPCIG00000017170YTHDF110089.628ENSPCOG00000025969YTHDF19988.628Propithecus_coquereli
ENSPCIG00000017170YTHDF19979.167ENSPVAG00000017568YTHDF19980.435Pteropus_vampyrus
ENSPCIG00000017170YTHDF110076.718ENSPNYG00000002266YTHDF19975.309Pundamilia_nyererei
ENSPCIG00000017170YTHDF19674.409ENSPNYG00000014007ythdf110074.221Pundamilia_nyererei
ENSPCIG00000017170YTHDF110070.693ENSPNAG00000012447ythdf19974.690Pygocentrus_nattereri
ENSPCIG00000017170YTHDF110090.607ENSRNOG00000027015Ythdf19989.170Rattus_norvegicus
ENSPCIG00000017170YTHDF110089.041ENSRBIG00000044959YTHDF19987.726Rhinopithecus_bieti
ENSPCIG00000017170YTHDF110088.845ENSRROG00000033014YTHDF19987.545Rhinopithecus_roxellana
ENSPCIG00000017170YTHDF110087.671ENSSBOG00000027278YTHDF110086.301Saimiri_boliviensis_boliviensis
ENSPCIG00000017170YTHDF110099.412ENSSHAG00000010430YTHDF18898.545Sarcophilus_harrisii
ENSPCIG00000017170YTHDF110076.336ENSSFOG00015000284ythdf19777.153Scleropages_formosus
ENSPCIG00000017170YTHDF19579.757ENSSMAG00000007635YTHDF19575.130Scophthalmus_maximus
ENSPCIG00000017170YTHDF17985.430ENSSMAG00000013715ythdf19566.537Scophthalmus_maximus
ENSPCIG00000017170YTHDF110076.426ENSSDUG00000015823YTHDF19775.492Seriola_dumerili
ENSPCIG00000017170YTHDF19675.000ENSSDUG00000000435ythdf19875.306Seriola_dumerili
ENSPCIG00000017170YTHDF110069.707ENSSLDG00000001054YTHDF19973.118Seriola_lalandi_dorsalis
ENSPCIG00000017170YTHDF19671.805ENSSLDG00000024948ythdf19772.773Seriola_lalandi_dorsalis
ENSPCIG00000017170YTHDF110094.325ENSSPUG00000015143YTHDF110094.129Sphenodon_punctatus
ENSPCIG00000017170YTHDF110076.527ENSSPAG00000003666YTHDF19974.476Stegastes_partitus
ENSPCIG00000017170YTHDF19671.028ENSSPAG00000014989ythdf19771.642Stegastes_partitus
ENSPCIG00000017170YTHDF110085.156ENSSSCG00000040086YTHDF19985.586Sus_scrofa
ENSPCIG00000017170YTHDF110094.716ENSTGUG00000007565YTHDF19994.505Taeniopygia_guttata
ENSPCIG00000017170YTHDF19672.037ENSTRUG00000005049YTHDF19973.256Takifugu_rubripes
ENSPCIG00000017170YTHDF19973.557ENSTRUG00000004288ythdf19973.311Takifugu_rubripes
ENSPCIG00000017170YTHDF110073.946ENSTNIG00000003975YTHDF19973.860Tetraodon_nigroviridis
ENSPCIG00000017170YTHDF19974.468ENSTNIG00000012490ythdf19973.684Tetraodon_nigroviridis
ENSPCIG00000017170YTHDF19985.119ENSTTRG00000001804YTHDF19985.560Tursiops_truncatus
ENSPCIG00000017170YTHDF110088.063ENSUAMG00000011021YTHDF110089.824Ursus_americanus
ENSPCIG00000017170YTHDF110087.671ENSUMAG00000022290YTHDF110089.432Ursus_maritimus
ENSPCIG00000017170YTHDF19990.392ENSVVUG00000015275YTHDF19989.216Vulpes_vulpes
ENSPCIG00000017170YTHDF19888.016ENSXETG00000027086ythdf19687.500Xenopus_tropicalis
ENSPCIG00000017170YTHDF19873.062ENSXCOG00000002490ythdf19473.285Xiphophorus_couchianus
ENSPCIG00000017170YTHDF110071.678ENSXCOG00000008115YTHDF19673.196Xiphophorus_couchianus
ENSPCIG00000017170YTHDF110075.665ENSXMAG00000015644YTHDF19876.000Xiphophorus_maculatus
ENSPCIG00000017170YTHDF19873.501ENSXMAG00000008525ythdf19673.732Xiphophorus_maculatus

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