EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000017205 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 5148 bases
Position: chrFUWB01001241.1:169511-174658
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000022671	LSM	PF01423.22	3.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000027976	-	335	-	ENSPCIP00000022671	86 (aa)	-	UPI0000027DBC

Gene Model

Click here to download ENSPCIG00000017205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000017205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000017205	-	73	46.154	ENSPCIG00000023723	-	89	46.154
ENSPCIG00000017205	-	78	50.746	ENSPCIG00000023469	LSM6	72	48.387
ENSPCIG00000017205	-	87	93.333	ENSPCIG00000020807	-	87	93.333
ENSPCIG00000017205	-	99	60.227	ENSPCIG00000017222	-	58	68.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000017205	-	50	97.674	ENSCHIG00000017139	-	63	97.674	Capra_hircus
ENSPCIG00000017205	-	100	100.000	ENSCATG00000003132	-	100	100.000	Cercocebus_atys
ENSPCIG00000017205	-	50	100.000	ENSCPBG00000001948	-	83	100.000	Chrysemys_picta_bellii
ENSPCIG00000017205	-	100	100.000	ENSCANG00000006758	-	100	100.000	Colobus_angolensis_palliatus
ENSPCIG00000017205	-	51	90.909	ENSFCAG00000032773	-	70	90.909	Felis_catus
ENSPCIG00000017205	-	91	58.974	ENSFCAG00000037511	-	87	61.644	Felis_catus
ENSPCIG00000017205	-	57	87.755	ENSGAGG00000014834	-	83	87.755	Gopherus_agassizii
ENSPCIG00000017205	-	100	100.000	ENSMFAG00000035517	-	100	100.000	Macaca_fascicularis
ENSPCIG00000017205	-	100	100.000	ENSMMUG00000009302	-	100	100.000	Macaca_mulatta
ENSPCIG00000017205	-	100	100.000	ENSMNEG00000030762	-	100	100.000	Macaca_nemestrina
ENSPCIG00000017205	-	100	100.000	ENSMLEG00000033558	-	100	100.000	Mandrillus_leucophaeus
ENSPCIG00000017205	-	100	100.000	ENSNLEG00000005835	-	100	100.000	Nomascus_leucogenys
ENSPCIG00000017205	-	50	97.674	ENSOGAG00000014320	-	81	97.674	Otolemur_garnettii
ENSPCIG00000017205	-	100	100.000	ENSPPAG00000003072	-	100	100.000	Pan_paniscus
ENSPCIG00000017205	-	73	76.190	ENSPPRG00000020147	-	100	76.190	Panthera_pardus
ENSPCIG00000017205	-	100	100.000	ENSPTRG00000005317	-	94	98.824	Pan_troglodytes
ENSPCIG00000017205	-	99	98.824	ENSPANG00000014632	-	97	98.824	Papio_anubis
ENSPCIG00000017205	-	53	93.478	ENSPFOG00000020883	-	100	93.478	Poecilia_formosa
ENSPCIG00000017205	-	100	100.000	ENSRBIG00000028811	-	100	100.000	Rhinopithecus_bieti
ENSPCIG00000017205	-	100	100.000	ENSRROG00000031057	-	100	100.000	Rhinopithecus_roxellana
ENSPCIG00000017205	-	64	78.182	ENSVVUG00000003155	-	73	78.182	Vulpes_vulpes