EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000017421 (Gene tree)
Gene ID: 110193895
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 25848 bases
Position: chrFUWB01008866.1:16520-42367
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000022948	Ago_hook	PF10427.9	3.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000028327	-	3506	-	ENSPCIP00000022948	970 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000017421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000017421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000017421	-	95	40.447	ENSPCIG00000012106	TNRC6A	50	39.634

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000017421	-	99	85.509	ENSG00000078687	TNRC6C	100	83.158	Homo_sapiens
ENSPCIG00000017421	-	65	43.921	ENSAPOG00000019749	tnrc6c1	51	39.623	Acanthochromis_polyacanthus
ENSPCIG00000017421	-	99	81.827	ENSAMEG00000013756	TNRC6C	54	81.837	Ailuropoda_melanoleuca
ENSPCIG00000017421	-	65	43.536	ENSAOCG00000023968	tnrc6c1	52	40.361	Amphiprion_ocellaris
ENSPCIG00000017421	-	65	42.753	ENSAPEG00000009020	tnrc6c1	51	39.960	Amphiprion_percula
ENSPCIG00000017421	-	99	84.334	ENSAPLG00000005456	TNRC6C	51	84.435	Anas_platyrhynchos
ENSPCIG00000017421	-	99	84.805	ENSACAG00000016198	TNRC6C	50	85.010	Anolis_carolinensis
ENSPCIG00000017421	-	99	86.303	ENSANAG00000021554	TNRC6C	58	86.303	Aotus_nancymaae
ENSPCIG00000017421	-	94	87.850	ENSBTAG00000018658	TNRC6C	58	80.718	Bos_taurus
ENSPCIG00000017421	-	99	85.905	ENSCJAG00000019431	TNRC6C	58	86.051	Callithrix_jacchus
ENSPCIG00000017421	-	99	85.832	ENSCAFG00000005224	TNRC6C	50	85.832	Canis_familiaris
ENSPCIG00000017421	-	99	85.832	ENSCAFG00020006661	TNRC6C	58	85.832	Canis_lupus_dingo
ENSPCIG00000017421	-	94	85.047	ENSCHIG00000026004	TNRC6C	58	79.342	Capra_hircus
ENSPCIG00000017421	-	99	86.626	ENSTSYG00000005403	TNRC6C	56	86.626	Carlito_syrichta
ENSPCIG00000017421	-	99	79.385	ENSCAPG00000007307	TNRC6C	51	79.835	Cavia_aperea
ENSPCIG00000017421	-	99	81.996	ENSCPOG00000000467	TNRC6C	56	82.510	Cavia_porcellus
ENSPCIG00000017421	-	99	86.317	ENSCCAG00000030524	TNRC6C	58	86.462	Cebus_capucinus
ENSPCIG00000017421	-	99	85.905	ENSCATG00000033135	TNRC6C	58	86.051	Cercocebus_atys
ENSPCIG00000017421	-	99	84.465	ENSCLAG00000011139	TNRC6C	51	84.465	Chinchilla_lanigera
ENSPCIG00000017421	-	99	86.008	ENSCSAG00000005167	TNRC6C	50	86.420	Chlorocebus_sabaeus
ENSPCIG00000017421	-	99	85.949	ENSCPBG00000027960	TNRC6C	58	86.359	Chrysemys_picta_bellii
ENSPCIG00000017421	-	99	84.979	ENSCANG00000041771	TNRC6C	57	85.128	Colobus_angolensis_palliatus
ENSPCIG00000017421	-	99	81.977	ENSCGRG00001022686	Tnrc6c	57	81.977	Cricetulus_griseus_chok1gshd
ENSPCIG00000017421	-	99	81.977	ENSCGRG00000018041	Tnrc6c	57	81.977	Cricetulus_griseus_crigri
ENSPCIG00000017421	-	99	85.758	ENSDNOG00000003247	TNRC6C	53	85.861	Dasypus_novemcinctus
ENSPCIG00000017421	-	99	77.515	ENSDORG00000004558	Tnrc6c	57	77.618	Dipodomys_ordii
ENSPCIG00000017421	-	99	84.671	ENSEASG00005004799	TNRC6C	59	84.671	Equus_asinus_asinus
ENSPCIG00000017421	-	99	84.671	ENSECAG00000012486	TNRC6C	54	84.671	Equus_caballus
ENSPCIG00000017421	-	93	85.110	ENSEEUG00000010008	TNRC6C	52	85.110	Erinaceus_europaeus
ENSPCIG00000017421	-	99	82.275	ENSFCAG00000028358	TNRC6C	58	82.431	Felis_catus
ENSPCIG00000017421	-	99	84.111	ENSFALG00000000848	TNRC6C	57	84.211	Ficedula_albicollis
ENSPCIG00000017421	-	99	84.156	ENSFDAG00000010368	TNRC6C	56	84.259	Fukomys_damarensis
ENSPCIG00000017421	-	89	38.624	ENSFHEG00000002936	tnrc6c1	50	38.818	Fundulus_heteroclitus
ENSPCIG00000017421	-	99	86.831	ENSGALG00000001725	TNRC6C	59	86.523	Gallus_gallus
ENSPCIG00000017421	-	99	39.106	ENSGAFG00000019019	tnrc6c1	54	39.424	Gambusia_affinis
ENSPCIG00000017421	-	99	85.143	ENSGAGG00000022043	TNRC6C	56	85.553	Gopherus_agassizii
ENSPCIG00000017421	-	99	84.877	ENSGGOG00000011304	TNRC6C	58	85.026	Gorilla_gorilla
ENSPCIG00000017421	-	99	85.082	ENSHGLG00000004809	TNRC6C	51	85.082	Heterocephalus_glaber_female
ENSPCIG00000017421	-	99	85.082	ENSHGLG00100012597	TNRC6C	51	85.082	Heterocephalus_glaber_male
ENSPCIG00000017421	-	99	82.238	ENSSTOG00000009101	TNRC6C	56	82.341	Ictidomys_tridecemlineatus
ENSPCIG00000017421	-	99	81.050	ENSJJAG00000017055	Tnrc6c	51	81.050	Jaculus_jaculus
ENSPCIG00000017421	-	65	42.344	ENSKMAG00000021023	tnrc6c1	51	40.171	Kryptolebias_marmoratus
ENSPCIG00000017421	-	99	77.245	ENSLACG00000015283	TNRC6C	56	77.347	Latimeria_chalumnae
ENSPCIG00000017421	-	99	85.802	ENSLAFG00000011122	TNRC6C	55	81.994	Loxodonta_africana
ENSPCIG00000017421	-	99	86.008	ENSMFAG00000043943	TNRC6C	58	86.154	Macaca_fascicularis
ENSPCIG00000017421	-	99	86.008	ENSMMUG00000011924	TNRC6C	58	86.154	Macaca_mulatta
ENSPCIG00000017421	-	99	86.008	ENSMNEG00000030405	TNRC6C	58	86.154	Macaca_nemestrina
ENSPCIG00000017421	-	99	86.008	ENSMLEG00000033436	TNRC6C	58	86.154	Mandrillus_leucophaeus
ENSPCIG00000017421	-	79	44.694	ENSMAMG00000023613	tnrc6c1	52	41.529	Mastacembelus_armatus
ENSPCIG00000017421	-	99	83.384	ENSMGAG00000003906	TNRC6C	51	83.282	Meleagris_gallopavo
ENSPCIG00000017421	-	99	81.462	ENSMAUG00000021618	Tnrc6c	57	81.462	Mesocricetus_auratus
ENSPCIG00000017421	-	99	86.111	ENSMICG00000003952	TNRC6C	58	85.436	Microcebus_murinus
ENSPCIG00000017421	-	99	84.346	ENSMOCG00000015879	Tnrc6c	56	84.346	Microtus_ochrogaster
ENSPCIG00000017421	-	62	44.953	ENSMMOG00000005203	tnrc6c1	52	40.289	Mola_mola
ENSPCIG00000017421	-	99	95.773	ENSMODG00000001785	TNRC6C	51	95.773	Monodelphis_domestica
ENSPCIG00000017421	-	99	83.625	MGP_CAROLIEiJ_G0017465	Tnrc6c	56	83.625	Mus_caroli
ENSPCIG00000017421	-	99	83.419	ENSMUSG00000025571	Tnrc6c	56	83.419	Mus_musculus
ENSPCIG00000017421	-	99	83.522	MGP_PahariEiJ_G0018593	Tnrc6c	56	83.522	Mus_pahari
ENSPCIG00000017421	-	99	83.625	MGP_SPRETEiJ_G0018309	Tnrc6c	56	83.625	Mus_spretus
ENSPCIG00000017421	-	99	81.006	ENSMPUG00000013348	TNRC6C	50	80.698	Mustela_putorius_furo
ENSPCIG00000017421	-	99	82.389	ENSNGAG00000012203	Tnrc6c	51	82.389	Nannospalax_galili
ENSPCIG00000017421	-	99	84.259	ENSNLEG00000000047	TNRC6C	50	84.671	Nomascus_leucogenys
ENSPCIG00000017421	-	98	97.794	ENSMEUG00000005104	TNRC6C	56	97.794	Notamacropus_eugenii
ENSPCIG00000017421	-	99	84.568	ENSODEG00000012499	TNRC6C	57	84.671	Octodon_degus
ENSPCIG00000017421	-	83	41.420	ENSONIG00000002210	tnrc6c1	52	39.888	Oreochromis_niloticus
ENSPCIG00000017421	-	85	38.322	ENSORLG00000009837	tnrc6c1	51	38.330	Oryzias_latipes
ENSPCIG00000017421	-	85	38.462	ENSORLG00020016510	tnrc6c1	54	38.330	Oryzias_latipes_hni
ENSPCIG00000017421	-	85	38.801	ENSORLG00015000171	tnrc6c1	68	38.531	Oryzias_latipes_hsok
ENSPCIG00000017421	-	85	39.071	ENSOMEG00000000357	tnrc6c1	51	38.492	Oryzias_melastigma
ENSPCIG00000017421	-	99	83.128	ENSOGAG00000007197	TNRC6C	56	83.128	Otolemur_garnettii
ENSPCIG00000017421	-	99	79.034	ENSOARG00000006041	TNRC6C	53	79.137	Ovis_aries
ENSPCIG00000017421	-	99	85.802	ENSPPAG00000027160	TNRC6C	58	85.949	Pan_paniscus
ENSPCIG00000017421	-	99	82.275	ENSPPRG00000018881	TNRC6C	58	82.431	Panthera_pardus
ENSPCIG00000017421	-	99	85.802	ENSPTRG00000009699	TNRC6C	58	85.949	Pan_troglodytes
ENSPCIG00000017421	-	99	86.008	ENSPANG00000019994	TNRC6C	57	86.420	Papio_anubis
ENSPCIG00000017421	-	94	42.368	ENSPKIG00000005428	tnrc6c1	51	42.931	Paramormyrops_kingsleyae
ENSPCIG00000017421	-	99	82.769	ENSPSIG00000018069	TNRC6C	56	83.077	Pelodiscus_sinensis
ENSPCIG00000017421	-	99	83.625	ENSPEMG00000009785	Tnrc6c	58	83.934	Peromyscus_maniculatus_bairdii
ENSPCIG00000017421	-	99	39.802	ENSPLAG00000021055	tnrc6c1	54	39.264	Poecilia_latipinna
ENSPCIG00000017421	-	99	73.340	ENSPCAG00000012510	TNRC6C	56	73.442	Procavia_capensis
ENSPCIG00000017421	-	99	86.523	ENSPCOG00000021451	TNRC6C	58	86.256	Propithecus_coquereli
ENSPCIG00000017421	-	99	81.314	ENSPVAG00000002008	TNRC6C	56	81.725	Pteropus_vampyrus
ENSPCIG00000017421	-	99	82.323	ENSRNOG00000022395	Tnrc6c	58	82.528	Rattus_norvegicus
ENSPCIG00000017421	-	99	86.008	ENSRBIG00000027777	TNRC6C	58	86.154	Rhinopithecus_bieti
ENSPCIG00000017421	-	99	85.905	ENSRROG00000042912	TNRC6C	58	86.051	Rhinopithecus_roxellana
ENSPCIG00000017421	-	99	85.082	ENSSBOG00000023981	TNRC6C	58	85.700	Saimiri_boliviensis_boliviensis
ENSPCIG00000017421	-	99	38.447	ENSSMAG00000012761	tnrc6c1	54	39.502	Scophthalmus_maximus
ENSPCIG00000017421	-	89	40.178	ENSSDUG00000002366	tnrc6c1	50	39.802	Seriola_dumerili
ENSPCIG00000017421	-	89	38.389	ENSSLDG00000025613	tnrc6c1	54	39.901	Seriola_lalandi_dorsalis
ENSPCIG00000017421	-	99	73.258	ENSSARG00000006816	TNRC6C	56	74.898	Sorex_araneus
ENSPCIG00000017421	-	65	42.775	ENSSPAG00000014977	tnrc6c1	51	39.803	Stegastes_partitus
ENSPCIG00000017421	-	94	83.178	ENSSSCG00000034373	TNRC6C	60	75.437	Sus_scrofa
ENSPCIG00000017421	-	99	86.462	ENSTGUG00000007733	TNRC6C	56	86.359	Taeniopygia_guttata
ENSPCIG00000017421	-	65	43.390	ENSTNIG00000005273	tnrc6c1	52	39.148	Tetraodon_nigroviridis
ENSPCIG00000017421	-	59	75.385	ENSTBEG00000005046	TNRC6C	52	75.897	Tupaia_belangeri
ENSPCIG00000017421	-	99	83.316	ENSTTRG00000010828	TNRC6C	56	83.316	Tursiops_truncatus
ENSPCIG00000017421	-	99	83.299	ENSUMAG00000013614	TNRC6C	52	83.709	Ursus_maritimus
ENSPCIG00000017421	-	99	85.832	ENSVVUG00000015268	TNRC6C	58	85.832	Vulpes_vulpes
ENSPCIG00000017421	-	99	69.919	ENSXETG00000019470	tnrc6c	57	69.685	Xenopus_tropicalis
ENSPCIG00000017421	-	99	39.681	ENSXMAG00000025971	tnrc6c1	54	39.264	Xiphophorus_maculatus