EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000018173 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 14437 bases
Position: chrFUWB01003403.1:130082-144518
Accession: 12950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000024050	KH_1	PF00013.29	3.5e-07	1	1
ENSPCIP00000024047	KH_1	PF00013.29	3.5e-07	1	1
ENSPCIP00000024048	KH_1	PF00013.29	3.5e-07	1	1
ENSPCIP00000024046	KH_1	PF00013.29	3.6e-07	1	1
ENSPCIP00000024048	zf-CCHC	PF00098.23	0.00023	1	1
ENSPCIP00000024050	zf-CCHC	PF00098.23	0.00023	1	1
ENSPCIP00000024046	zf-CCHC	PF00098.23	0.00024	1	1
ENSPCIP00000024047	zf-CCHC	PF00098.23	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000029658	SF1-203	1857	-	ENSPCIP00000024048	618 (aa)	-	-
ENSPCIT00000029660	SF1-204	2267	-	ENSPCIP00000024050	634 (aa)	-	-
ENSPCIT00000029656	SF1-201	1911	-	ENSPCIP00000024046	636 (aa)	-	-
ENSPCIT00000029657	SF1-202	1917	-	ENSPCIP00000024047	638 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000018173's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000018173's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000018173	SF1	61	80.463	ENSAPOG00000012341	sf1	60	74.828	Acanthochromis_polyacanthus
ENSPCIG00000018173	SF1	99	89.114	ENSAMEG00000017828	SF1	83	96.623	Ailuropoda_melanoleuca
ENSPCIG00000018173	SF1	60	83.245	ENSACIG00000016514	sf1	62	78.365	Amphilophus_citrinellus
ENSPCIG00000018173	SF1	61	80.670	ENSAOCG00000010934	sf1	61	76.347	Amphiprion_ocellaris
ENSPCIG00000018173	SF1	61	80.670	ENSAPEG00000009498	sf1	61	76.347	Amphiprion_percula
ENSPCIG00000018173	SF1	60	82.895	ENSATEG00000001894	sf1	60	77.804	Anabas_testudineus
ENSPCIG00000018173	SF1	96	87.561	ENSANAG00000022607	-	99	86.711	Aotus_nancymaae
ENSPCIG00000018173	SF1	100	98.748	ENSANAG00000026664	-	100	98.748	Aotus_nancymaae
ENSPCIG00000018173	SF1	59	84.553	ENSACLG00000007633	sf1	62	79.227	Astatotilapia_calliptera
ENSPCIG00000018173	SF1	62	85.128	ENSAMXG00000003630	sf1	53	81.022	Astyanax_mexicanus
ENSPCIG00000018173	SF1	100	98.905	ENSBTAG00000001035	SF1	100	98.905	Bos_taurus
ENSPCIG00000018173	SF1	100	98.905	ENSCJAG00000002780	SF1	100	98.905	Callithrix_jacchus
ENSPCIG00000018173	SF1	100	98.276	ENSCAFG00000014239	SF1	100	98.276	Canis_familiaris
ENSPCIG00000018173	SF1	100	98.905	ENSCAFG00020014381	SF1	100	98.905	Canis_lupus_dingo
ENSPCIG00000018173	SF1	100	98.905	ENSCHIG00000025867	SF1	100	98.905	Capra_hircus
ENSPCIG00000018173	SF1	98	77.424	ENSCAPG00000010762	SF1	100	77.424	Cavia_aperea
ENSPCIG00000018173	SF1	98	97.767	ENSCPOG00000012290	SF1	100	97.767	Cavia_porcellus
ENSPCIG00000018173	SF1	100	98.276	ENSCCAG00000037881	SF1	100	98.276	Cebus_capucinus
ENSPCIG00000018173	SF1	100	79.467	ENSCCAG00000023781	-	94	84.071	Cebus_capucinus
ENSPCIG00000018173	SF1	100	98.905	ENSCATG00000011564	SF1	100	98.905	Cercocebus_atys
ENSPCIG00000018173	SF1	83	98.299	ENSCSAG00000007258	SF1	97	98.299	Chlorocebus_sabaeus
ENSPCIG00000018173	SF1	67	92.476	ENSCHOG00000006008	SF1	79	92.584	Choloepus_hoffmanni
ENSPCIG00000018173	SF1	82	88.100	ENSCPBG00000023763	SF1	66	85.687	Chrysemys_picta_bellii
ENSPCIG00000018173	SF1	50	67.093	ENSCING00000005564	-	72	61.667	Ciona_intestinalis
ENSPCIG00000018173	SF1	90	50.172	ENSCSAVG00000009055	-	56	66.667	Ciona_savignyi
ENSPCIG00000018173	SF1	100	98.905	ENSCANG00000042201	SF1	100	98.905	Colobus_angolensis_palliatus
ENSPCIG00000018173	SF1	100	98.748	ENSCGRG00001003677	Sf1	100	98.748	Cricetulus_griseus_chok1gshd
ENSPCIG00000018173	SF1	83	96.952	ENSCGRG00000001708	Sf1	97	96.952	Cricetulus_griseus_crigri
ENSPCIG00000018173	SF1	64	79.557	ENSCSEG00000014375	sf1	58	75.822	Cynoglossus_semilaevis
ENSPCIG00000018173	SF1	60	84.595	ENSCVAG00000001670	sf1	63	79.167	Cyprinodon_variegatus
ENSPCIG00000018173	SF1	81	81.886	ENSDARG00000008188	sf1	72	79.254	Danio_rerio
ENSPCIG00000018173	SF1	83	98.299	ENSDNOG00000001282	SF1	97	98.299	Dasypus_novemcinctus
ENSPCIG00000018173	SF1	100	98.905	ENSDORG00000016334	Sf1	100	98.905	Dipodomys_ordii
ENSPCIG00000018173	SF1	92	90.598	ENSETEG00000012830	SF1	82	88.889	Echinops_telfairi
ENSPCIG00000018173	SF1	83	97.921	ENSEASG00005018272	SF1	97	97.921	Equus_asinus_asinus
ENSPCIG00000018173	SF1	83	98.110	ENSECAG00000024544	SF1	97	98.110	Equus_caballus
ENSPCIG00000018173	SF1	64	98.219	ENSEEUG00000001058	SF1	100	98.219	Erinaceus_europaeus
ENSPCIG00000018173	SF1	60	81.698	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSPCIG00000018173	SF1	100	98.276	ENSFCAG00000012231	SF1	100	98.276	Felis_catus
ENSPCIG00000018173	SF1	91	94.609	ENSFDAG00000009833	SF1	99	89.639	Fukomys_damarensis
ENSPCIG00000018173	SF1	61	81.443	ENSFHEG00000022656	sf1	61	76.995	Fundulus_heteroclitus
ENSPCIG00000018173	SF1	53	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSPCIG00000018173	SF1	61	84.416	ENSGAFG00000019284	sf1	78	79.048	Gambusia_affinis
ENSPCIG00000018173	SF1	72	89.231	ENSGAGG00000021691	SF1	72	85.687	Gopherus_agassizii
ENSPCIG00000018173	SF1	60	82.632	ENSHBUG00000011598	sf1	61	76.869	Haplochromis_burtoni
ENSPCIG00000018173	SF1	100	98.119	ENSHGLG00000009541	SF1	100	98.119	Heterocephalus_glaber_female
ENSPCIG00000018173	SF1	94	86.711	ENSHGLG00100013879	-	99	85.880	Heterocephalus_glaber_male
ENSPCIG00000018173	SF1	69	88.276	ENSHGLG00100008076	-	87	86.111	Heterocephalus_glaber_male
ENSPCIG00000018173	SF1	72	85.504	ENSHGLG00100008255	-	94	85.294	Heterocephalus_glaber_male
ENSPCIG00000018173	SF1	63	79.597	ENSHCOG00000011388	sf1	58	75.414	Hippocampus_comes
ENSPCIG00000018173	SF1	99	98.885	ENSSTOG00000009790	-	100	98.885	Ictidomys_tridecemlineatus
ENSPCIG00000018173	SF1	73	96.774	ENSSTOG00000024353	-	78	96.774	Ictidomys_tridecemlineatus
ENSPCIG00000018173	SF1	100	99.061	ENSJJAG00000011788	Sf1	100	99.061	Jaculus_jaculus
ENSPCIG00000018173	SF1	62	82.653	ENSKMAG00000005854	sf1	63	77.752	Kryptolebias_marmoratus
ENSPCIG00000018173	SF1	78	82.461	ENSLBEG00000019836	sf1	64	77.990	Labrus_bergylta
ENSPCIG00000018173	SF1	67	79.048	ENSLACG00000018493	SF1	74	79.277	Latimeria_chalumnae
ENSPCIG00000018173	SF1	60	85.829	ENSLOCG00000002130	sf1	59	80.344	Lepisosteus_oculatus
ENSPCIG00000018173	SF1	99	91.176	ENSLAFG00000007201	SF1	100	92.403	Loxodonta_africana
ENSPCIG00000018173	SF1	100	98.905	ENSMFAG00000033122	SF1	100	98.905	Macaca_fascicularis
ENSPCIG00000018173	SF1	100	98.276	ENSMMUG00000022606	SF1	100	98.889	Macaca_mulatta
ENSPCIG00000018173	SF1	100	98.905	ENSMNEG00000037901	SF1	100	98.905	Macaca_nemestrina
ENSPCIG00000018173	SF1	99	98.887	ENSMLEG00000040706	SF1	95	98.887	Mandrillus_leucophaeus
ENSPCIG00000018173	SF1	61	81.606	ENSMAMG00000001780	sf1	59	77.751	Mastacembelus_armatus
ENSPCIG00000018173	SF1	60	82.895	ENSMZEG00005009196	sf1	61	77.103	Maylandia_zebra
ENSPCIG00000018173	SF1	100	97.806	ENSMAUG00000014064	Sf1	100	97.806	Mesocricetus_auratus
ENSPCIG00000018173	SF1	100	98.748	ENSMICG00000001202	SF1	100	98.748	Microcebus_murinus
ENSPCIG00000018173	SF1	100	97.806	ENSMOCG00000022038	Sf1	100	97.806	Microtus_ochrogaster
ENSPCIG00000018173	SF1	60	81.989	ENSMMOG00000020474	sf1	60	76.886	Mola_mola
ENSPCIG00000018173	SF1	69	98.829	ENSMODG00000029407	SF1	97	95.302	Monodelphis_domestica
ENSPCIG00000018173	SF1	60	83.155	ENSMALG00000020521	sf1	68	78.345	Monopterus_albus
ENSPCIG00000018173	SF1	100	98.592	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSPCIG00000018173	SF1	100	98.592	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSPCIG00000018173	SF1	100	98.592	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSPCIG00000018173	SF1	100	98.592	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSPCIG00000018173	SF1	99	98.891	ENSMPUG00000012684	SF1	99	98.891	Mustela_putorius_furo
ENSPCIG00000018173	SF1	72	93.736	ENSMLUG00000029800	-	78	93.833	Myotis_lucifugus
ENSPCIG00000018173	SF1	99	98.574	ENSMLUG00000015217	-	99	98.574	Myotis_lucifugus
ENSPCIG00000018173	SF1	100	98.276	ENSNGAG00000005550	Sf1	100	98.276	Nannospalax_galili
ENSPCIG00000018173	SF1	60	83.288	ENSNBRG00000017606	sf1	61	79.227	Neolamprologus_brichardi
ENSPCIG00000018173	SF1	100	98.748	ENSNLEG00000005236	-	100	98.748	Nomascus_leucogenys
ENSPCIG00000018173	SF1	81	99.023	ENSMEUG00000013424	SF1	97	99.023	Notamacropus_eugenii
ENSPCIG00000018173	SF1	75	98.105	ENSOPRG00000005008	SF1	96	98.105	Ochotona_princeps
ENSPCIG00000018173	SF1	100	86.574	ENSODEG00000006102	-	100	86.420	Octodon_degus
ENSPCIG00000018173	SF1	60	82.632	ENSONIG00000015728	sf1	61	76.869	Oreochromis_niloticus
ENSPCIG00000018173	SF1	64	85.468	ENSOANG00000002909	SF1	96	87.212	Ornithorhynchus_anatinus
ENSPCIG00000018173	SF1	99	98.095	ENSOCUG00000026486	SF1	100	98.095	Oryctolagus_cuniculus
ENSPCIG00000018173	SF1	62	80.563	ENSORLG00000011853	sf1	58	76.978	Oryzias_latipes
ENSPCIG00000018173	SF1	63	79.250	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSPCIG00000018173	SF1	60	80.366	ENSORLG00015012855	sf1	59	76.739	Oryzias_latipes_hsok
ENSPCIG00000018173	SF1	62	79.795	ENSOMEG00000005210	sf1	60	77.218	Oryzias_melastigma
ENSPCIG00000018173	SF1	100	98.119	ENSOGAG00000016196	SF1	100	98.119	Otolemur_garnettii
ENSPCIG00000018173	SF1	83	93.863	ENSOARG00000009166	SF1	82	98.715	Ovis_aries
ENSPCIG00000018173	SF1	97	99.021	ENSPPAG00000002799	-	100	99.021	Pan_paniscus
ENSPCIG00000018173	SF1	98	98.246	ENSPPRG00000013566	SF1	100	99.021	Panthera_pardus
ENSPCIG00000018173	SF1	72	97.973	ENSPTIG00000016141	SF1	80	97.973	Panthera_tigris_altaica
ENSPCIG00000018173	SF1	100	98.276	ENSPTRG00000003846	SF1	100	98.276	Pan_troglodytes
ENSPCIG00000018173	SF1	100	94.225	ENSPANG00000020754	SF1	97	98.299	Papio_anubis
ENSPCIG00000018173	SF1	53	79.880	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSPCIG00000018173	SF1	55	87.179	ENSPSIG00000003610	SF1	97	75.835	Pelodiscus_sinensis
ENSPCIG00000018173	SF1	100	97.962	ENSPEMG00000010463	Sf1	100	97.962	Peromyscus_maniculatus_bairdii
ENSPCIG00000018173	SF1	61	86.016	ENSPFOG00000013683	sf1	68	81.384	Poecilia_formosa
ENSPCIG00000018173	SF1	60	84.127	ENSPLAG00000018076	sf1	61	79.426	Poecilia_latipinna
ENSPCIG00000018173	SF1	60	84.127	ENSPMEG00000005726	sf1	62	79.665	Poecilia_mexicana
ENSPCIG00000018173	SF1	60	83.202	ENSPREG00000004155	sf1	59	78.947	Poecilia_reticulata
ENSPCIG00000018173	SF1	100	98.119	ENSPPYG00000003098	-	100	98.119	Pongo_abelii
ENSPCIG00000018173	SF1	83	96.584	ENSPCAG00000013631	SF1	79	96.584	Procavia_capensis
ENSPCIG00000018173	SF1	100	98.748	ENSPCOG00000027546	SF1	100	98.748	Propithecus_coquereli
ENSPCIG00000018173	SF1	83	97.154	ENSPVAG00000016938	SF1	79	97.154	Pteropus_vampyrus
ENSPCIG00000018173	SF1	60	82.895	ENSPNYG00000004673	sf1	59	78.282	Pundamilia_nyererei
ENSPCIG00000018173	SF1	60	85.714	ENSPNAG00000013072	sf1	60	79.048	Pygocentrus_nattereri
ENSPCIG00000018173	SF1	100	98.592	ENSRNOG00000021085	Sf1	100	98.592	Rattus_norvegicus
ENSPCIG00000018173	SF1	100	94.514	ENSRBIG00000042818	SF1	100	94.514	Rhinopithecus_bieti
ENSPCIG00000018173	SF1	100	85.047	ENSRROG00000045655	SF1	98	97.255	Rhinopithecus_roxellana
ENSPCIG00000018173	SF1	97	79.582	ENSSBOG00000022267	-	99	80.769	Saimiri_boliviensis_boliviensis
ENSPCIG00000018173	SF1	66	93.415	ENSSHAG00000006841	SF1	74	96.030	Sarcophilus_harrisii
ENSPCIG00000018173	SF1	95	71.215	ENSSFOG00015021978	sf1	58	77.913	Scleropages_formosus
ENSPCIG00000018173	SF1	81	74.951	ENSSMAG00000007549	sf1	63	76.995	Scophthalmus_maximus
ENSPCIG00000018173	SF1	61	80.977	ENSSDUG00000003903	sf1	63	76.869	Seriola_dumerili
ENSPCIG00000018173	SF1	81	94.391	ENSSARG00000008180	SF1	100	94.391	Sorex_araneus
ENSPCIG00000018173	SF1	79	83.301	ENSSPUG00000012907	SF1	86	81.958	Sphenodon_punctatus
ENSPCIG00000018173	SF1	61	80.412	ENSSPAG00000019060	sf1	61	76.347	Stegastes_partitus
ENSPCIG00000018173	SF1	100	98.748	ENSSSCG00000013021	SF1	100	98.748	Sus_scrofa
ENSPCIG00000018173	SF1	84	63.100	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSPCIG00000018173	SF1	87	100.000	ENSTBEG00000013133	SF1	80	100.000	Tupaia_belangeri
ENSPCIG00000018173	SF1	82	92.664	ENSTTRG00000008857	SF1	96	92.248	Tursiops_truncatus
ENSPCIG00000018173	SF1	82	95.992	ENSUAMG00000011977	SF1	100	95.992	Ursus_americanus
ENSPCIG00000018173	SF1	78	100.000	ENSUMAG00000007268	SF1	90	97.500	Ursus_maritimus
ENSPCIG00000018173	SF1	56	99.598	ENSVPAG00000011912	SF1	66	99.598	Vicugna_pacos
ENSPCIG00000018173	SF1	83	98.299	ENSVVUG00000028585	SF1	97	98.299	Vulpes_vulpes
ENSPCIG00000018173	SF1	96	71.829	ENSXETG00000008434	sf1	68	81.265	Xenopus_tropicalis
ENSPCIG00000018173	SF1	59	85.479	ENSXCOG00000003704	sf1	75	80.788	Xiphophorus_couchianus
ENSPCIG00000018173	SF1	60	83.641	ENSXMAG00000007822	sf1	61	79.665	Xiphophorus_maculatus