EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000018419 (Gene tree)
Gene ID: 110209493
Gene Symbol: SMNDC1
Alias: -
Full Name: survival motor neuron domain containing 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 8982 bases
Position: chrFUWB01001606.1:567483-576464
Accession: 110209493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000024425	SMN	PF06003.12	9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000030097	SMNDC1-201	788	-	ENSPCIP00000024425	238 (aa)	XP_020843658	UPI00005E9582

Gene Model

Click here to download ENSPCIG00000018419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000018419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000018419	SMNDC1	97	62.609	ENSPCIG00000009693	-	100	62.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000018419	SMNDC1	100	99.580	ENSG00000119953	SMNDC1	100	99.580	Homo_sapiens
ENSPCIG00000018419	SMNDC1	100	75.210	ENSAPOG00000021772	smndc1	100	75.210	Acanthochromis_polyacanthus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSAMEG00000005251	SMNDC1	100	99.160	Ailuropoda_melanoleuca
ENSPCIG00000018419	SMNDC1	100	76.050	ENSACIG00000004819	smndc1	100	76.050	Amphilophus_citrinellus
ENSPCIG00000018419	SMNDC1	100	75.210	ENSAOCG00000017869	smndc1	100	75.210	Amphiprion_ocellaris
ENSPCIG00000018419	SMNDC1	100	75.210	ENSAPEG00000007752	smndc1	100	75.210	Amphiprion_percula
ENSPCIG00000018419	SMNDC1	100	76.471	ENSATEG00000006830	smndc1	100	76.471	Anabas_testudineus
ENSPCIG00000018419	SMNDC1	83	96.465	ENSAPLG00000004322	SMNDC1	100	96.465	Anas_platyrhynchos
ENSPCIG00000018419	SMNDC1	100	95.378	ENSACAG00000005983	SMNDC1	100	95.378	Anolis_carolinensis
ENSPCIG00000018419	SMNDC1	100	99.160	ENSANAG00000032875	SMNDC1	100	99.160	Aotus_nancymaae
ENSPCIG00000018419	SMNDC1	100	76.471	ENSACLG00000016360	smndc1	100	76.471	Astatotilapia_calliptera
ENSPCIG00000018419	SMNDC1	100	76.891	ENSAMXG00000020310	smndc1	100	76.891	Astyanax_mexicanus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSBTAG00000000551	SMNDC1	100	98.739	Bos_taurus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSCJAG00000018624	SMNDC1	100	99.160	Callithrix_jacchus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSCAFG00000010720	SMNDC1	100	99.160	Canis_familiaris
ENSPCIG00000018419	SMNDC1	100	99.160	ENSCAFG00020011913	SMNDC1	100	99.160	Canis_lupus_dingo
ENSPCIG00000018419	SMNDC1	100	98.739	ENSCHIG00000010604	SMNDC1	100	98.739	Capra_hircus
ENSPCIG00000018419	SMNDC1	100	99.580	ENSTSYG00000026454	SMNDC1	100	99.580	Carlito_syrichta
ENSPCIG00000018419	SMNDC1	84	98.010	ENSCAPG00000009132	SMNDC1	100	98.010	Cavia_aperea
ENSPCIG00000018419	SMNDC1	100	98.319	ENSCPOG00000031666	SMNDC1	100	98.319	Cavia_porcellus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSCCAG00000021793	SMNDC1	100	99.160	Cebus_capucinus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSCATG00000035910	SMNDC1	100	98.739	Cercocebus_atys
ENSPCIG00000018419	SMNDC1	100	98.319	ENSCLAG00000002838	SMNDC1	100	98.319	Chinchilla_lanigera
ENSPCIG00000018419	SMNDC1	100	99.160	ENSCSAG00000005169	SMNDC1	100	99.160	Chlorocebus_sabaeus
ENSPCIG00000018419	SMNDC1	81	98.446	ENSCHOG00000002936	SMNDC1	100	98.446	Choloepus_hoffmanni
ENSPCIG00000018419	SMNDC1	100	97.899	ENSCPBG00000012837	SMNDC1	100	97.899	Chrysemys_picta_bellii
ENSPCIG00000018419	SMNDC1	100	78.151	ENSCANG00000036994	-	100	78.151	Colobus_angolensis_palliatus
ENSPCIG00000018419	SMNDC1	100	91.597	ENSCANG00000034620	-	100	91.597	Colobus_angolensis_palliatus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSCANG00000031720	-	100	99.160	Colobus_angolensis_palliatus
ENSPCIG00000018419	SMNDC1	100	98.319	ENSCGRG00001012973	Smndc1	100	98.319	Cricetulus_griseus_chok1gshd
ENSPCIG00000018419	SMNDC1	100	98.319	ENSCGRG00000012396	Smndc1	100	98.319	Cricetulus_griseus_crigri
ENSPCIG00000018419	SMNDC1	100	76.050	ENSCSEG00000015621	smndc1	100	76.050	Cynoglossus_semilaevis
ENSPCIG00000018419	SMNDC1	100	76.891	ENSCVAG00000020432	smndc1	100	76.891	Cyprinodon_variegatus
ENSPCIG00000018419	SMNDC1	100	78.992	ENSDARG00000056235	smndc1	100	78.992	Danio_rerio
ENSPCIG00000018419	SMNDC1	100	99.160	ENSDNOG00000016387	SMNDC1	83	99.160	Dasypus_novemcinctus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSDORG00000023715	Smndc1	100	99.160	Dipodomys_ordii
ENSPCIG00000018419	SMNDC1	95	41.767	FBgn0039977	CG17454	98	42.972	Drosophila_melanogaster
ENSPCIG00000018419	SMNDC1	100	70.954	ENSEBUG00000010929	smndc1	100	70.954	Eptatretus_burgeri
ENSPCIG00000018419	SMNDC1	100	99.160	ENSEASG00005014930	SMNDC1	100	99.160	Equus_asinus_asinus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSECAG00000029973	SMNDC1	100	99.160	Equus_caballus
ENSPCIG00000018419	SMNDC1	83	69.697	ENSEEUG00000013407	-	100	69.697	Erinaceus_europaeus
ENSPCIG00000018419	SMNDC1	100	78.571	ENSELUG00000000227	smndc1	100	78.571	Esox_lucius
ENSPCIG00000018419	SMNDC1	100	99.160	ENSFCAG00000027353	SMNDC1	100	99.160	Felis_catus
ENSPCIG00000018419	SMNDC1	100	96.218	ENSFALG00000002306	SMNDC1	100	96.218	Ficedula_albicollis
ENSPCIG00000018419	SMNDC1	100	98.739	ENSFDAG00000006468	SMNDC1	100	98.739	Fukomys_damarensis
ENSPCIG00000018419	SMNDC1	100	76.471	ENSFHEG00000020150	smndc1	100	76.471	Fundulus_heteroclitus
ENSPCIG00000018419	SMNDC1	100	77.311	ENSGMOG00000016585	smndc1	100	77.311	Gadus_morhua
ENSPCIG00000018419	SMNDC1	100	96.218	ENSGALG00000008561	SMNDC1	100	96.218	Gallus_gallus
ENSPCIG00000018419	SMNDC1	100	75.210	ENSGAFG00000011582	smndc1	100	75.210	Gambusia_affinis
ENSPCIG00000018419	SMNDC1	100	76.050	ENSGACG00000009468	smndc1	100	76.050	Gasterosteus_aculeatus
ENSPCIG00000018419	SMNDC1	100	97.899	ENSGAGG00000024547	SMNDC1	100	97.899	Gopherus_agassizii
ENSPCIG00000018419	SMNDC1	100	99.160	ENSGGOG00000010071	SMNDC1	100	99.160	Gorilla_gorilla
ENSPCIG00000018419	SMNDC1	100	76.471	ENSHBUG00000017596	smndc1	100	76.471	Haplochromis_burtoni
ENSPCIG00000018419	SMNDC1	100	98.739	ENSHGLG00000013390	-	100	98.739	Heterocephalus_glaber_female
ENSPCIG00000018419	SMNDC1	100	68.033	ENSHGLG00000001157	-	100	64.898	Heterocephalus_glaber_female
ENSPCIG00000018419	SMNDC1	100	76.230	ENSHGLG00100004278	-	100	75.820	Heterocephalus_glaber_male
ENSPCIG00000018419	SMNDC1	100	98.739	ENSHGLG00100004814	-	100	98.739	Heterocephalus_glaber_male
ENSPCIG00000018419	SMNDC1	100	74.895	ENSHCOG00000000783	smndc1	100	74.895	Hippocampus_comes
ENSPCIG00000018419	SMNDC1	100	78.151	ENSIPUG00000004217	smndc1	100	78.151	Ictalurus_punctatus
ENSPCIG00000018419	SMNDC1	100	99.580	ENSSTOG00000006088	SMNDC1	100	99.580	Ictidomys_tridecemlineatus
ENSPCIG00000018419	SMNDC1	100	98.319	ENSJJAG00000019974	Smndc1	100	98.319	Jaculus_jaculus
ENSPCIG00000018419	SMNDC1	100	75.210	ENSKMAG00000020134	smndc1	100	75.210	Kryptolebias_marmoratus
ENSPCIG00000018419	SMNDC1	100	74.790	ENSLBEG00000004598	smndc1	100	74.790	Labrus_bergylta
ENSPCIG00000018419	SMNDC1	100	84.454	ENSLACG00000007784	SMNDC1	100	84.454	Latimeria_chalumnae
ENSPCIG00000018419	SMNDC1	100	84.454	ENSLOCG00000012355	smndc1	100	84.454	Lepisosteus_oculatus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSLAFG00000014353	SMNDC1	100	98.739	Loxodonta_africana
ENSPCIG00000018419	SMNDC1	100	81.092	ENSMFAG00000038381	-	100	81.092	Macaca_fascicularis
ENSPCIG00000018419	SMNDC1	100	99.160	ENSMFAG00000002433	-	100	99.160	Macaca_fascicularis
ENSPCIG00000018419	SMNDC1	100	81.092	ENSMMUG00000045875	-	100	81.092	Macaca_mulatta
ENSPCIG00000018419	SMNDC1	100	99.160	ENSMMUG00000007775	SMNDC1	100	99.160	Macaca_mulatta
ENSPCIG00000018419	SMNDC1	100	99.160	ENSMNEG00000042963	-	100	99.160	Macaca_nemestrina
ENSPCIG00000018419	SMNDC1	100	87.815	ENSMNEG00000033853	-	100	87.815	Macaca_nemestrina
ENSPCIG00000018419	SMNDC1	100	92.887	ENSMLEG00000040236	SMNDC1	100	92.469	Mandrillus_leucophaeus
ENSPCIG00000018419	SMNDC1	89	73.709	ENSMAMG00000018233	smndc1	87	73.709	Mastacembelus_armatus
ENSPCIG00000018419	SMNDC1	100	76.471	ENSMZEG00005027510	smndc1	100	76.471	Maylandia_zebra
ENSPCIG00000018419	SMNDC1	84	96.000	ENSMGAG00000010777	SMNDC1	84	96.000	Meleagris_gallopavo
ENSPCIG00000018419	SMNDC1	99	79.747	ENSMAUG00000005459	-	93	79.747	Mesocricetus_auratus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSMAUG00000012243	-	100	99.160	Mesocricetus_auratus
ENSPCIG00000018419	SMNDC1	100	98.319	ENSMICG00000027336	-	100	98.319	Microcebus_murinus
ENSPCIG00000018419	SMNDC1	100	86.134	ENSMICG00000031640	-	100	86.134	Microcebus_murinus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSMOCG00000002458	Smndc1	100	98.739	Microtus_ochrogaster
ENSPCIG00000018419	SMNDC1	100	76.471	ENSMMOG00000008856	smndc1	100	76.471	Mola_mola
ENSPCIG00000018419	SMNDC1	100	100.000	ENSMODG00000010542	SMNDC1	100	100.000	Monodelphis_domestica
ENSPCIG00000018419	SMNDC1	100	76.471	ENSMALG00000017598	smndc1	100	76.471	Monopterus_albus
ENSPCIG00000018419	SMNDC1	100	98.739	MGP_CAROLIEiJ_G0023072	Smndc1	100	98.739	Mus_caroli
ENSPCIG00000018419	SMNDC1	100	99.160	ENSMUSG00000025024	Smndc1	100	99.160	Mus_musculus
ENSPCIG00000018419	SMNDC1	100	99.580	MGP_PahariEiJ_G0014560	Smndc1	100	99.580	Mus_pahari
ENSPCIG00000018419	SMNDC1	100	99.160	MGP_SPRETEiJ_G0023993	Smndc1	100	99.160	Mus_spretus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSMPUG00000002089	SMNDC1	100	99.160	Mustela_putorius_furo
ENSPCIG00000018419	SMNDC1	100	98.739	ENSMLUG00000016007	SMNDC1	100	98.739	Myotis_lucifugus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSNGAG00000006833	Smndc1	100	98.739	Nannospalax_galili
ENSPCIG00000018419	SMNDC1	100	76.050	ENSNBRG00000017089	smndc1	100	76.050	Neolamprologus_brichardi
ENSPCIG00000018419	SMNDC1	100	99.160	ENSNLEG00000015471	SMNDC1	100	99.160	Nomascus_leucogenys
ENSPCIG00000018419	SMNDC1	82	58.500	ENSMEUG00000010120	-	99	59.000	Notamacropus_eugenii
ENSPCIG00000018419	SMNDC1	100	98.319	ENSOPRG00000015348	SMNDC1	100	98.319	Ochotona_princeps
ENSPCIG00000018419	SMNDC1	100	69.748	ENSODEG00000007594	-	100	66.807	Octodon_degus
ENSPCIG00000018419	SMNDC1	100	76.050	ENSONIG00000000434	smndc1	100	76.050	Oreochromis_niloticus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSOANG00000001598	SMNDC1	100	98.739	Ornithorhynchus_anatinus
ENSPCIG00000018419	SMNDC1	100	74.790	ENSOCUG00000012274	-	100	76.471	Oryctolagus_cuniculus
ENSPCIG00000018419	SMNDC1	100	98.319	ENSOCUG00000008145	-	100	98.319	Oryctolagus_cuniculus
ENSPCIG00000018419	SMNDC1	100	76.050	ENSORLG00000005934	smndc1	95	76.050	Oryzias_latipes
ENSPCIG00000018419	SMNDC1	100	76.050	ENSORLG00020008796	smndc1	95	76.050	Oryzias_latipes_hni
ENSPCIG00000018419	SMNDC1	100	76.050	ENSORLG00015013666	smndc1	100	76.050	Oryzias_latipes_hsok
ENSPCIG00000018419	SMNDC1	100	77.731	ENSOMEG00000007590	smndc1	100	77.731	Oryzias_melastigma
ENSPCIG00000018419	SMNDC1	100	98.739	ENSOGAG00000000571	SMNDC1	100	98.739	Otolemur_garnettii
ENSPCIG00000018419	SMNDC1	100	98.739	ENSOARG00000009500	SMNDC1	100	98.739	Ovis_aries
ENSPCIG00000018419	SMNDC1	100	99.160	ENSPPAG00000027815	SMNDC1	100	99.160	Pan_paniscus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSPPRG00000013749	SMNDC1	100	99.160	Panthera_pardus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSPTIG00000011451	SMNDC1	100	99.160	Panthera_tigris_altaica
ENSPCIG00000018419	SMNDC1	100	99.160	ENSPTRG00000002937	SMNDC1	100	99.160	Pan_troglodytes
ENSPCIG00000018419	SMNDC1	100	99.160	ENSPANG00000020805	-	100	99.160	Papio_anubis
ENSPCIG00000018419	SMNDC1	100	93.277	ENSPANG00000031346	-	100	93.277	Papio_anubis
ENSPCIG00000018419	SMNDC1	100	80.672	ENSPKIG00000017164	smndc1	100	80.672	Paramormyrops_kingsleyae
ENSPCIG00000018419	SMNDC1	100	98.319	ENSPSIG00000012257	SMNDC1	100	98.319	Pelodiscus_sinensis
ENSPCIG00000018419	SMNDC1	100	73.950	ENSPMGG00000015651	smndc1	100	73.950	Periophthalmus_magnuspinnatus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSPEMG00000022058	Smndc1	100	99.160	Peromyscus_maniculatus_bairdii
ENSPCIG00000018419	SMNDC1	100	67.623	ENSPMAG00000007705	smndc1	100	68.033	Petromyzon_marinus
ENSPCIG00000018419	SMNDC1	100	75.630	ENSPFOG00000017113	smndc1	100	75.630	Poecilia_formosa
ENSPCIG00000018419	SMNDC1	100	76.050	ENSPLAG00000010372	smndc1	100	76.050	Poecilia_latipinna
ENSPCIG00000018419	SMNDC1	100	76.050	ENSPMEG00000012288	smndc1	100	76.050	Poecilia_mexicana
ENSPCIG00000018419	SMNDC1	100	75.210	ENSPREG00000012279	smndc1	100	75.210	Poecilia_reticulata
ENSPCIG00000018419	SMNDC1	100	99.160	ENSPPYG00000002643	SMNDC1	100	99.160	Pongo_abelii
ENSPCIG00000018419	SMNDC1	81	98.446	ENSPCAG00000016183	SMNDC1	100	98.446	Procavia_capensis
ENSPCIG00000018419	SMNDC1	100	98.739	ENSPCOG00000024343	SMNDC1	100	98.739	Propithecus_coquereli
ENSPCIG00000018419	SMNDC1	100	76.050	ENSPVAG00000004368	SMNDC1	100	76.050	Pteropus_vampyrus
ENSPCIG00000018419	SMNDC1	92	70.222	ENSPNYG00000024093	smndc1	98	70.222	Pundamilia_nyererei
ENSPCIG00000018419	SMNDC1	100	77.311	ENSPNAG00000025285	smndc1	100	77.311	Pygocentrus_nattereri
ENSPCIG00000018419	SMNDC1	100	98.739	ENSRNOG00000014833	Smndc1	100	98.739	Rattus_norvegicus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSRBIG00000000224	-	100	98.739	Rhinopithecus_bieti
ENSPCIG00000018419	SMNDC1	100	82.773	ENSRBIG00000032452	-	100	82.773	Rhinopithecus_bieti
ENSPCIG00000018419	SMNDC1	100	83.193	ENSRROG00000039125	-	100	83.193	Rhinopithecus_roxellana
ENSPCIG00000018419	SMNDC1	100	99.160	ENSRROG00000044992	-	100	99.160	Rhinopithecus_roxellana
ENSPCIG00000018419	SMNDC1	100	99.160	ENSSBOG00000026789	SMNDC1	100	99.160	Saimiri_boliviensis_boliviensis
ENSPCIG00000018419	SMNDC1	100	100.000	ENSSHAG00000015189	SMNDC1	100	100.000	Sarcophilus_harrisii
ENSPCIG00000018419	SMNDC1	100	80.672	ENSSFOG00015008311	smndc1	100	80.672	Scleropages_formosus
ENSPCIG00000018419	SMNDC1	100	76.050	ENSSMAG00000020118	smndc1	100	76.050	Scophthalmus_maximus
ENSPCIG00000018419	SMNDC1	100	76.891	ENSSDUG00000015330	smndc1	100	76.891	Seriola_dumerili
ENSPCIG00000018419	SMNDC1	100	76.891	ENSSLDG00000017325	smndc1	100	76.891	Seriola_lalandi_dorsalis
ENSPCIG00000018419	SMNDC1	100	98.319	ENSSARG00000006063	SMNDC1	100	98.319	Sorex_araneus
ENSPCIG00000018419	SMNDC1	100	96.639	ENSSPUG00000004574	SMNDC1	100	96.639	Sphenodon_punctatus
ENSPCIG00000018419	SMNDC1	100	74.790	ENSSPAG00000000338	smndc1	100	74.790	Stegastes_partitus
ENSPCIG00000018419	SMNDC1	100	98.739	ENSSSCG00000030507	SMNDC1	100	98.739	Sus_scrofa
ENSPCIG00000018419	SMNDC1	100	96.218	ENSTGUG00000010599	SMNDC1	100	96.218	Taeniopygia_guttata
ENSPCIG00000018419	SMNDC1	100	74.370	ENSTRUG00000023281	smndc1	100	74.370	Takifugu_rubripes
ENSPCIG00000018419	SMNDC1	100	75.210	ENSTNIG00000013331	smndc1	100	75.210	Tetraodon_nigroviridis
ENSPCIG00000018419	SMNDC1	100	98.739	ENSTBEG00000014337	SMNDC1	100	98.739	Tupaia_belangeri
ENSPCIG00000018419	SMNDC1	100	99.160	ENSUAMG00000008142	SMNDC1	100	99.160	Ursus_americanus
ENSPCIG00000018419	SMNDC1	100	99.160	ENSUMAG00000023722	SMNDC1	100	99.160	Ursus_maritimus
ENSPCIG00000018419	SMNDC1	83	99.495	ENSVPAG00000003402	SMNDC1	100	99.495	Vicugna_pacos
ENSPCIG00000018419	SMNDC1	100	99.160	ENSVVUG00000007820	SMNDC1	100	99.160	Vulpes_vulpes
ENSPCIG00000018419	SMNDC1	60	83.099	ENSXETG00000015415	SMNDC1	100	83.099	Xenopus_tropicalis
ENSPCIG00000018419	SMNDC1	100	75.210	ENSXCOG00000009159	smndc1	100	75.210	Xiphophorus_couchianus
ENSPCIG00000018419	SMNDC1	100	74.790	ENSXMAG00000012755	smndc1	100	74.790	Xiphophorus_maculatus