EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000018553 (Gene tree)
Gene ID: 110199396
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 30919 bases
Position: chrFUWB01000299.1:443233-474151
Accession: 110199396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000024619	tRNA-synt_1g	PF09334.11	2.4e-11	1	1
ENSPCIP00000024623	tRNA-synt_1g	PF09334.11	2.5e-11	1	1
ENSPCIP00000024619	Anticodon_1	PF08264.13	5.9e-35	1	1
ENSPCIP00000024623	Anticodon_1	PF08264.13	6.2e-35	1	1
ENSPCIP00000024619	tRNA-synt_1	PF00133.22	6.2e-203	1	1
ENSPCIP00000024623	tRNA-synt_1	PF00133.22	6.3e-203	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000030336	VARS-202	3894	-	ENSPCIP00000024623	1277 (aa)	-	-
ENSPCIT00000030331	VARS-201	4166	XM_020974213	ENSPCIP00000024619	1264 (aa)	XP_020829872	-

Gene Model

Click here to download ENSPCIG00000018553's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000018553's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000018553	VARS	78	51.310	ENSPCIG00000015040	VARS2	91	65.179

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000018553	VARS	100	85.997	ENSG00000204394	VARS	100	85.997	Homo_sapiens
ENSPCIG00000018553	VARS	98	64.578	ENSAPOG00000020921	vars	99	64.337	Acanthochromis_polyacanthus
ENSPCIG00000018553	VARS	98	64.578	ENSAPOG00000020691	vars	99	64.337	Acanthochromis_polyacanthus
ENSPCIG00000018553	VARS	100	86.087	ENSAMEG00000006417	VARS	100	86.087	Ailuropoda_melanoleuca
ENSPCIG00000018553	VARS	100	65.725	ENSACIG00000013752	vars	100	65.647	Amphilophus_citrinellus
ENSPCIG00000018553	VARS	100	64.572	ENSAOCG00000002447	vars	100	64.123	Amphiprion_ocellaris
ENSPCIG00000018553	VARS	100	64.534	ENSAPEG00000010638	vars	99	65.187	Amphiprion_percula
ENSPCIG00000018553	VARS	100	64.460	ENSATEG00000020219	vars	100	64.246	Anabas_testudineus
ENSPCIG00000018553	VARS	90	69.957	ENSACAG00000029133	-	99	70.017	Anolis_carolinensis
ENSPCIG00000018553	VARS	100	86.313	ENSANAG00000015453	VARS	100	86.313	Aotus_nancymaae
ENSPCIG00000018553	VARS	100	64.806	ENSACLG00000025699	vars	97	64.729	Astatotilapia_calliptera
ENSPCIG00000018553	VARS	94	65.221	ENSAMXG00000017716	vars	95	64.559	Astyanax_mexicanus
ENSPCIG00000018553	VARS	100	86.313	ENSBTAG00000005631	VARS	100	86.313	Bos_taurus
ENSPCIG00000018553	VARS	100	86.234	ENSCJAG00000002604	VARS	100	86.234	Callithrix_jacchus
ENSPCIG00000018553	VARS	100	85.522	ENSCAFG00000000636	VARS	100	85.522	Canis_familiaris
ENSPCIG00000018553	VARS	94	85.811	ENSCAFG00020020790	VARS	96	85.811	Canis_lupus_dingo
ENSPCIG00000018553	VARS	100	86.472	ENSCHIG00000011008	VARS	100	86.472	Capra_hircus
ENSPCIG00000018553	VARS	100	85.759	ENSTSYG00000001567	VARS	100	85.759	Carlito_syrichta
ENSPCIG00000018553	VARS	95	80.699	ENSCAPG00000013736	VARS	99	84.602	Cavia_aperea
ENSPCIG00000018553	VARS	100	85.206	ENSCPOG00000000870	VARS	100	85.206	Cavia_porcellus
ENSPCIG00000018553	VARS	100	86.313	ENSCCAG00000035656	VARS	100	86.313	Cebus_capucinus
ENSPCIG00000018553	VARS	100	86.313	ENSCATG00000022394	VARS	100	86.313	Cercocebus_atys
ENSPCIG00000018553	VARS	90	81.741	ENSCLAG00000009470	VARS	95	81.741	Chinchilla_lanigera
ENSPCIG00000018553	VARS	100	86.392	ENSCSAG00000008784	VARS	100	86.392	Chlorocebus_sabaeus
ENSPCIG00000018553	VARS	77	73.717	ENSCPBG00000007943	VARS	96	73.717	Chrysemys_picta_bellii
ENSPCIG00000018553	VARS	100	86.392	ENSCANG00000033570	VARS	100	86.392	Colobus_angolensis_palliatus
ENSPCIG00000018553	VARS	100	85.127	ENSCGRG00001005686	Vars	100	85.127	Cricetulus_griseus_chok1gshd
ENSPCIG00000018553	VARS	92	80.402	ENSCGRG00000013352	Vars	78	80.402	Cricetulus_griseus_crigri
ENSPCIG00000018553	VARS	100	64.269	ENSCSEG00000019652	vars	100	64.022	Cynoglossus_semilaevis
ENSPCIG00000018553	VARS	100	65.423	ENSCVAG00000022398	vars	100	65.581	Cyprinodon_variegatus
ENSPCIG00000018553	VARS	100	64.236	ENSDARG00000044575	vars	100	64.386	Danio_rerio
ENSPCIG00000018553	VARS	83	85.920	ENSDORG00000016433	Vars	93	85.920	Dipodomys_ordii
ENSPCIG00000018553	VARS	69	82.821	ENSETEG00000003824	VARS	77	82.821	Echinops_telfairi
ENSPCIG00000018553	VARS	50	72.464	ENSEBUG00000007086	vars	84	71.603	Eptatretus_burgeri
ENSPCIG00000018553	VARS	57	63.324	ENSEBUG00000004637	vars	100	63.599	Eptatretus_burgeri
ENSPCIG00000018553	VARS	100	86.551	ENSEASG00005015673	VARS	100	86.551	Equus_asinus_asinus
ENSPCIG00000018553	VARS	100	85.929	ENSECAG00000014620	VARS	100	86.245	Equus_caballus
ENSPCIG00000018553	VARS	78	85.096	ENSEEUG00000004116	VARS	80	85.096	Erinaceus_europaeus
ENSPCIG00000018553	VARS	100	64.319	ENSELUG00000006550	vars	97	64.231	Esox_lucius
ENSPCIG00000018553	VARS	100	86.076	ENSFCAG00000004510	VARS	100	86.076	Felis_catus
ENSPCIG00000018553	VARS	82	86.186	ENSFDAG00000011401	VARS	100	86.186	Fukomys_damarensis
ENSPCIG00000018553	VARS	100	65.035	ENSFHEG00000010672	vars	100	65.426	Fundulus_heteroclitus
ENSPCIG00000018553	VARS	92	65.917	ENSGMOG00000014908	vars	97	66.167	Gadus_morhua
ENSPCIG00000018553	VARS	100	65.525	ENSGAFG00000021630	vars	100	65.603	Gambusia_affinis
ENSPCIG00000018553	VARS	92	65.690	ENSGACG00000009601	vars	97	65.772	Gasterosteus_aculeatus
ENSPCIG00000018553	VARS	50	63.823	ENSGAGG00000006508	-	91	63.550	Gopherus_agassizii
ENSPCIG00000018553	VARS	100	86.234	ENSGGOG00000011364	VARS	100	86.234	Gorilla_gorilla
ENSPCIG00000018553	VARS	100	64.961	ENSHBUG00000017151	vars	97	64.884	Haplochromis_burtoni
ENSPCIG00000018553	VARS	100	83.861	ENSHGLG00000011646	VARS	100	83.861	Heterocephalus_glaber_female
ENSPCIG00000018553	VARS	93	76.993	ENSHGLG00100018062	VARS	99	76.942	Heterocephalus_glaber_male
ENSPCIG00000018553	VARS	99	64.126	ENSHCOG00000012198	vars	99	64.747	Hippocampus_comes
ENSPCIG00000018553	VARS	100	64.825	ENSIPUG00000005218	vars	100	64.825	Ictalurus_punctatus
ENSPCIG00000018553	VARS	100	86.166	ENSSTOG00000013112	VARS	100	86.166	Ictidomys_tridecemlineatus
ENSPCIG00000018553	VARS	100	66.614	ENSJJAG00000015343	-	98	69.742	Jaculus_jaculus
ENSPCIG00000018553	VARS	100	83.782	ENSJJAG00000019749	-	100	83.782	Jaculus_jaculus
ENSPCIG00000018553	VARS	100	65.324	ENSKMAG00000009455	vars	100	64.771	Kryptolebias_marmoratus
ENSPCIG00000018553	VARS	100	63.953	ENSLBEG00000010341	vars	100	63.715	Labrus_bergylta
ENSPCIG00000018553	VARS	94	61.873	ENSLACG00000015232	VARS	99	62.613	Latimeria_chalumnae
ENSPCIG00000018553	VARS	100	66.197	ENSLOCG00000004240	vars	100	66.328	Lepisosteus_oculatus
ENSPCIG00000018553	VARS	100	85.285	ENSLAFG00000023090	VARS	100	85.759	Loxodonta_africana
ENSPCIG00000018553	VARS	100	86.155	ENSMFAG00000001032	VARS	100	86.155	Macaca_fascicularis
ENSPCIG00000018553	VARS	100	86.155	ENSMMUG00000006828	VARS	100	86.155	Macaca_mulatta
ENSPCIG00000018553	VARS	100	86.234	ENSMNEG00000042072	VARS	100	86.234	Macaca_nemestrina
ENSPCIG00000018553	VARS	100	86.313	ENSMLEG00000039307	VARS	100	86.313	Mandrillus_leucophaeus
ENSPCIG00000018553	VARS	100	64.850	ENSMAMG00000003949	vars	100	65.211	Mastacembelus_armatus
ENSPCIG00000018553	VARS	100	64.884	ENSMZEG00005018327	vars	100	64.325	Maylandia_zebra
ENSPCIG00000018553	VARS	100	85.601	ENSMAUG00000006715	Vars	100	85.601	Mesocricetus_auratus
ENSPCIG00000018553	VARS	100	86.234	ENSMICG00000003548	VARS	100	86.234	Microcebus_murinus
ENSPCIG00000018553	VARS	100	82.595	ENSMOCG00000015404	Vars	100	83.070	Microtus_ochrogaster
ENSPCIG00000018553	VARS	100	64.544	ENSMMOG00000015801	vars	100	64.308	Mola_mola
ENSPCIG00000018553	VARS	100	95.016	ENSMODG00000015204	-	100	95.016	Monodelphis_domestica
ENSPCIG00000018553	VARS	99	64.359	ENSMALG00000022532	vars	99	64.446	Monopterus_albus
ENSPCIG00000018553	VARS	100	85.522	MGP_CAROLIEiJ_G0021491	Vars	100	85.997	Mus_caroli
ENSPCIG00000018553	VARS	100	85.443	ENSMUSG00000007029	Vars	100	85.918	Mus_musculus
ENSPCIG00000018553	VARS	100	85.127	MGP_PahariEiJ_G0020486	Vars	100	85.601	Mus_pahari
ENSPCIG00000018553	VARS	100	85.522	MGP_SPRETEiJ_G0022396	Vars	100	85.997	Mus_spretus
ENSPCIG00000018553	VARS	100	86.313	ENSMPUG00000010821	VARS	100	86.313	Mustela_putorius_furo
ENSPCIG00000018553	VARS	78	85.729	ENSMLUG00000013126	VARS	100	86.134	Myotis_lucifugus
ENSPCIG00000018553	VARS	100	84.810	ENSNGAG00000012151	Vars	100	84.810	Nannospalax_galili
ENSPCIG00000018553	VARS	100	64.651	ENSNBRG00000020520	vars	100	64.574	Neolamprologus_brichardi
ENSPCIG00000018553	VARS	100	85.839	ENSNLEG00000006351	VARS	100	85.839	Nomascus_leucogenys
ENSPCIG00000018553	VARS	100	92.484	ENSMEUG00000011378	VARS	100	92.484	Notamacropus_eugenii
ENSPCIG00000018553	VARS	100	85.839	ENSOPRG00000003607	VARS	100	85.839	Ochotona_princeps
ENSPCIG00000018553	VARS	100	85.127	ENSODEG00000017681	VARS	100	85.127	Octodon_degus
ENSPCIG00000018553	VARS	100	65.442	ENSONIG00000013064	vars	99	68.343	Oreochromis_niloticus
ENSPCIG00000018553	VARS	77	78.029	ENSOANG00000005400	VARS	98	77.672	Ornithorhynchus_anatinus
ENSPCIG00000018553	VARS	100	83.728	ENSOCUG00000022463	VARS	100	83.965	Oryctolagus_cuniculus
ENSPCIG00000018553	VARS	100	64.248	ENSORLG00000013063	vars	100	64.892	Oryzias_latipes
ENSPCIG00000018553	VARS	100	65.194	ENSORLG00020003504	vars	100	65.271	Oryzias_latipes_hni
ENSPCIG00000018553	VARS	100	65.167	ENSORLG00015009001	vars	100	65.322	Oryzias_latipes_hsok
ENSPCIG00000018553	VARS	100	65.167	ENSOMEG00000015016	vars	100	65.244	Oryzias_melastigma
ENSPCIG00000018553	VARS	100	85.285	ENSOGAG00000007515	VARS	100	85.285	Otolemur_garnettii
ENSPCIG00000018553	VARS	100	86.392	ENSPPAG00000034012	VARS	100	86.392	Pan_paniscus
ENSPCIG00000018553	VARS	100	86.313	ENSPPRG00000014855	VARS	100	86.313	Panthera_pardus
ENSPCIG00000018553	VARS	85	86.431	ENSPTIG00000010462	VARS	94	86.204	Panthera_tigris_altaica
ENSPCIG00000018553	VARS	100	86.313	ENSPTRG00000017985	VARS	100	86.313	Pan_troglodytes
ENSPCIG00000018553	VARS	100	84.779	ENSPANG00000014565	VARS	100	84.779	Papio_anubis
ENSPCIG00000018553	VARS	100	63.552	ENSPKIG00000016304	vars	100	63.713	Paramormyrops_kingsleyae
ENSPCIG00000018553	VARS	100	65.300	ENSPMGG00000023909	vars	100	65.142	Periophthalmus_magnuspinnatus
ENSPCIG00000018553	VARS	100	85.839	ENSPEMG00000006639	Vars	100	85.839	Peromyscus_maniculatus_bairdii
ENSPCIG00000018553	VARS	100	65.525	ENSPFOG00000015690	vars	100	65.603	Poecilia_formosa
ENSPCIG00000018553	VARS	100	65.699	ENSPLAG00000009590	vars	100	65.681	Poecilia_latipinna
ENSPCIG00000018553	VARS	100	65.525	ENSPMEG00000004708	vars	100	65.603	Poecilia_mexicana
ENSPCIG00000018553	VARS	100	63.088	ENSPREG00000013264	vars	96	72.803	Poecilia_reticulata
ENSPCIG00000018553	VARS	100	84.573	ENSPPYG00000016460	VARS	100	84.573	Pongo_abelii
ENSPCIG00000018553	VARS	85	84.532	ENSPCAG00000013565	VARS	85	84.532	Procavia_capensis
ENSPCIG00000018553	VARS	100	86.087	ENSPCOG00000010942	VARS	100	86.403	Propithecus_coquereli
ENSPCIG00000018553	VARS	100	82.991	ENSPVAG00000012403	VARS	100	82.991	Pteropus_vampyrus
ENSPCIG00000018553	VARS	100	64.884	ENSPNYG00000022511	vars	100	64.806	Pundamilia_nyererei
ENSPCIG00000018553	VARS	100	65.167	ENSPNAG00000020962	vars	100	65.089	Pygocentrus_nattereri
ENSPCIG00000018553	VARS	100	85.997	ENSRNOG00000000867	Vars	100	85.997	Rattus_norvegicus
ENSPCIG00000018553	VARS	100	86.313	ENSRBIG00000041669	VARS	100	86.313	Rhinopithecus_bieti
ENSPCIG00000018553	VARS	100	86.313	ENSRROG00000045490	VARS	100	86.313	Rhinopithecus_roxellana
ENSPCIG00000018553	VARS	100	86.076	ENSSBOG00000035402	VARS	100	86.076	Saimiri_boliviensis_boliviensis
ENSPCIG00000018553	VARS	100	89.647	ENSSHAG00000006937	VARS	100	89.725	Sarcophilus_harrisii
ENSPCIG00000018553	VARS	100	64.529	ENSSFOG00015014272	vars	100	64.583	Scleropages_formosus
ENSPCIG00000018553	VARS	100	64.241	ENSSMAG00000009596	vars	99	64.158	Scophthalmus_maximus
ENSPCIG00000018553	VARS	100	64.628	ENSSDUG00000014177	vars	100	64.474	Seriola_dumerili
ENSPCIG00000018553	VARS	100	64.474	ENSSLDG00000025316	vars	100	64.396	Seriola_lalandi_dorsalis
ENSPCIG00000018553	VARS	100	64.880	ENSSPAG00000017068	vars	100	64.875	Stegastes_partitus
ENSPCIG00000018553	VARS	100	85.613	ENSSSCG00000038950	VARS	100	85.929	Sus_scrofa
ENSPCIG00000018553	VARS	82	64.334	ENSTRUG00000012307	vars	98	63.897	Takifugu_rubripes
ENSPCIG00000018553	VARS	100	64.945	ENSTNIG00000008011	vars	100	64.734	Tetraodon_nigroviridis
ENSPCIG00000018553	VARS	53	89.513	ENSTBEG00000004728	-	60	89.513	Tupaia_belangeri
ENSPCIG00000018553	VARS	100	78.402	ENSTTRG00000014128	VARS	100	78.402	Tursiops_truncatus
ENSPCIG00000018553	VARS	100	82.707	ENSUAMG00000010424	VARS	100	82.707	Ursus_americanus
ENSPCIG00000018553	VARS	93	86.508	ENSUMAG00000013486	VARS	98	86.190	Ursus_maritimus
ENSPCIG00000018553	VARS	100	85.296	ENSVVUG00000021323	VARS	100	85.138	Vulpes_vulpes
ENSPCIG00000018553	VARS	96	62.288	ENSXETG00000024076	vars	98	62.288	Xenopus_tropicalis
ENSPCIG00000018553	VARS	100	65.276	ENSXCOG00000019172	vars	100	65.354	Xiphophorus_couchianus
ENSPCIG00000018553	VARS	100	65.447	ENSXMAG00000010927	vars	100	65.525	Xiphophorus_maculatus