EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000018560 (Gene tree)
Gene ID: 110199438
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 1840 bases
Position: chrFUWB01000299.1:472367-474206
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000024629	LSM	PF01423.22	9.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000030343	-	300	-	ENSPCIP00000024629	99 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000018560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000018560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000018560	-	65	36.364	ENSPCIG00000018289	LSM4	67	33.333
ENSPCIG00000018560	-	95	95.745	ENSPCIG00000017098	-	99	95.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000018560	-	95	98.936	ENSG00000204392	LSM2	99	98.936	Homo_sapiens
ENSPCIG00000018560	-	95	100.000	ENSAPOG00000017967	si:ch73-14h10.2	99	100.000	Acanthochromis_polyacanthus
ENSPCIG00000018560	-	95	98.936	ENSAMEG00000006483	LSM2	100	98.936	Ailuropoda_melanoleuca
ENSPCIG00000018560	-	95	100.000	ENSACIG00000007795	si:ch73-14h10.2	62	100.000	Amphilophus_citrinellus
ENSPCIG00000018560	-	100	94.118	ENSAOCG00000006949	si:ch73-14h10.2	84	94.118	Amphiprion_ocellaris
ENSPCIG00000018560	-	100	94.118	ENSAPEG00000020375	si:ch73-14h10.2	94	94.118	Amphiprion_percula
ENSPCIG00000018560	-	95	100.000	ENSATEG00000011376	si:ch73-14h10.2	99	100.000	Anabas_testudineus
ENSPCIG00000018560	-	95	98.936	ENSACAG00000017281	LSM2	90	98.936	Anolis_carolinensis
ENSPCIG00000018560	-	92	80.220	ENSANAG00000028033	-	96	80.220	Aotus_nancymaae
ENSPCIG00000018560	-	95	98.936	ENSANAG00000028372	LSM2	99	98.936	Aotus_nancymaae
ENSPCIG00000018560	-	95	100.000	ENSACLG00000024717	smx5	99	100.000	Astatotilapia_calliptera
ENSPCIG00000018560	-	95	100.000	ENSAMXG00000036868	si:ch73-14h10.2	99	100.000	Astyanax_mexicanus
ENSPCIG00000018560	-	95	98.936	ENSBTAG00000005634	LSM2	99	98.936	Bos_taurus
ENSPCIG00000018560	-	94	82.796	WBGene00001808	gut-2	96	82.796	Caenorhabditis_elegans
ENSPCIG00000018560	-	95	98.936	ENSCJAG00000040899	LSM2	99	98.936	Callithrix_jacchus
ENSPCIG00000018560	-	72	97.183	ENSCAFG00020016978	-	88	97.183	Canis_lupus_dingo
ENSPCIG00000018560	-	95	98.936	ENSCHIG00000016153	LSM2	100	98.936	Capra_hircus
ENSPCIG00000018560	-	94	89.247	ENSTSYG00000030015	-	99	89.247	Carlito_syrichta
ENSPCIG00000018560	-	95	98.936	ENSTSYG00000034844	LSM2	99	98.936	Carlito_syrichta
ENSPCIG00000018560	-	73	98.611	ENSCAPG00000009970	LSM2	92	98.611	Cavia_aperea
ENSPCIG00000018560	-	95	98.936	ENSCPOG00000021053	LSM2	99	98.936	Cavia_porcellus
ENSPCIG00000018560	-	95	98.936	ENSCCAG00000024276	LSM2	99	98.936	Cebus_capucinus
ENSPCIG00000018560	-	95	98.936	ENSCATG00000013737	LSM2	99	98.936	Cercocebus_atys
ENSPCIG00000018560	-	95	98.936	ENSCLAG00000008081	LSM2	99	98.936	Chinchilla_lanigera
ENSPCIG00000018560	-	95	98.936	ENSCSAG00000008800	LSM2	99	98.936	Chlorocebus_sabaeus
ENSPCIG00000018560	-	95	98.936	ENSCHOG00000007702	LSM2	99	98.936	Choloepus_hoffmanni
ENSPCIG00000018560	-	95	95.745	ENSCING00000022677	-	99	95.745	Ciona_intestinalis
ENSPCIG00000018560	-	95	98.936	ENSCANG00000039576	LSM2	99	98.936	Colobus_angolensis_palliatus
ENSPCIG00000018560	-	95	98.936	ENSCGRG00001013932	Lsm2	99	98.936	Cricetulus_griseus_chok1gshd
ENSPCIG00000018560	-	73	98.611	ENSCGRG00000013311	Lsm2	62	98.611	Cricetulus_griseus_crigri
ENSPCIG00000018560	-	95	100.000	ENSCSEG00000002911	si:ch73-14h10.2	99	100.000	Cynoglossus_semilaevis
ENSPCIG00000018560	-	95	100.000	ENSCVAG00000015394	si:ch73-14h10.2	89	100.000	Cyprinodon_variegatus
ENSPCIG00000018560	-	95	98.936	ENSDARG00000070867	smx5	99	98.936	Danio_rerio
ENSPCIG00000018560	-	95	98.936	ENSDNOG00000002633	LSM2	100	98.936	Dasypus_novemcinctus
ENSPCIG00000018560	-	95	98.936	ENSDORG00000026571	Lsm2	99	98.936	Dipodomys_ordii
ENSPCIG00000018560	-	91	95.556	FBgn0036277	CG10418	95	95.556	Drosophila_melanogaster
ENSPCIG00000018560	-	99	95.918	ENSEASG00005015670	LSM2	82	95.918	Equus_asinus_asinus
ENSPCIG00000018560	-	99	95.918	ENSECAG00000018791	LSM2	82	95.918	Equus_caballus
ENSPCIG00000018560	-	95	98.936	ENSELUG00000008241	smx5	99	98.936	Esox_lucius
ENSPCIG00000018560	-	95	98.936	ENSFCAG00000045887	LSM2	99	98.936	Felis_catus
ENSPCIG00000018560	-	95	98.936	ENSFDAG00000000390	LSM2	99	98.936	Fukomys_damarensis
ENSPCIG00000018560	-	95	96.875	ENSFHEG00000009619	si:ch73-14h10.2	100	96.875	Fundulus_heteroclitus
ENSPCIG00000018560	-	95	100.000	ENSGMOG00000019208	si:ch73-14h10.2	100	100.000	Gadus_morhua
ENSPCIG00000018560	-	95	100.000	ENSGAFG00000017286	si:ch73-14h10.2	99	100.000	Gambusia_affinis
ENSPCIG00000018560	-	95	100.000	ENSGACG00000003827	si:ch73-14h10.2	99	100.000	Gasterosteus_aculeatus
ENSPCIG00000018560	-	95	98.936	ENSGAGG00000012458	LSM2	99	98.936	Gopherus_agassizii
ENSPCIG00000018560	-	95	98.936	ENSGGOG00000011383	LSM2	99	98.936	Gorilla_gorilla
ENSPCIG00000018560	-	95	98.936	ENSHGLG00000011299	LSM2	99	98.936	Heterocephalus_glaber_female
ENSPCIG00000018560	-	95	98.936	ENSHGLG00100017194	LSM2	99	98.936	Heterocephalus_glaber_male
ENSPCIG00000018560	-	95	100.000	ENSHCOG00000014057	si:ch73-14h10.2	99	100.000	Hippocampus_comes
ENSPCIG00000018560	-	95	100.000	ENSIPUG00000010539	lsm2	99	100.000	Ictalurus_punctatus
ENSPCIG00000018560	-	95	98.936	ENSSTOG00000013144	LSM2	99	98.936	Ictidomys_tridecemlineatus
ENSPCIG00000018560	-	90	76.404	ENSJJAG00000019477	-	100	76.404	Jaculus_jaculus
ENSPCIG00000018560	-	95	100.000	ENSKMAG00000014909	si:ch73-14h10.2	99	100.000	Kryptolebias_marmoratus
ENSPCIG00000018560	-	95	98.936	ENSLBEG00000025781	si:ch73-14h10.2	98	98.936	Labrus_bergylta
ENSPCIG00000018560	-	95	100.000	ENSLACG00000015064	LSM2	99	100.000	Latimeria_chalumnae
ENSPCIG00000018560	-	95	100.000	ENSLOCG00000005228	si:ch73-14h10.2	99	100.000	Lepisosteus_oculatus
ENSPCIG00000018560	-	95	98.936	ENSLAFG00000016139	LSM2	100	98.936	Loxodonta_africana
ENSPCIG00000018560	-	95	98.936	ENSMFAG00000001016	LSM2	99	98.936	Macaca_fascicularis
ENSPCIG00000018560	-	95	80.851	ENSMMUG00000045473	-	97	80.851	Macaca_mulatta
ENSPCIG00000018560	-	95	98.936	ENSMMUG00000006832	LSM2	99	98.936	Macaca_mulatta
ENSPCIG00000018560	-	95	98.936	ENSMNEG00000045355	LSM2	99	98.936	Macaca_nemestrina
ENSPCIG00000018560	-	76	84.000	ENSMNEG00000040973	-	91	84.000	Macaca_nemestrina
ENSPCIG00000018560	-	95	79.787	ENSMLEG00000031181	-	97	79.787	Mandrillus_leucophaeus
ENSPCIG00000018560	-	95	98.936	ENSMLEG00000037369	-	99	98.936	Mandrillus_leucophaeus
ENSPCIG00000018560	-	95	100.000	ENSMAMG00000010053	si:ch73-14h10.2	72	100.000	Mastacembelus_armatus
ENSPCIG00000018560	-	95	97.917	ENSMZEG00005008688	si:ch73-14h10.2	100	97.917	Maylandia_zebra
ENSPCIG00000018560	-	95	98.936	ENSMAUG00000021966	Lsm2	99	98.936	Mesocricetus_auratus
ENSPCIG00000018560	-	73	77.778	ENSMICG00000046764	-	92	77.778	Microcebus_murinus
ENSPCIG00000018560	-	95	98.936	ENSMOCG00000015306	Lsm2	99	98.936	Microtus_ochrogaster
ENSPCIG00000018560	-	95	98.936	ENSMMOG00000005603	si:ch73-14h10.2	100	98.936	Mola_mola
ENSPCIG00000018560	-	95	100.000	ENSMODG00000015177	LSM2	99	100.000	Monodelphis_domestica
ENSPCIG00000018560	-	95	100.000	ENSMALG00000016490	si:ch73-14h10.2	99	100.000	Monopterus_albus
ENSPCIG00000018560	-	95	98.936	MGP_CAROLIEiJ_G0021490	Lsm2	99	98.936	Mus_caroli
ENSPCIG00000018560	-	95	98.936	ENSMUSG00000007050	Lsm2	99	98.936	Mus_musculus
ENSPCIG00000018560	-	95	98.936	MGP_PahariEiJ_G0020485	Lsm2	99	98.936	Mus_pahari
ENSPCIG00000018560	-	95	98.936	MGP_SPRETEiJ_G0022395	Lsm2	99	98.936	Mus_spretus
ENSPCIG00000018560	-	95	98.936	ENSNGAG00000003997	Lsm2	99	98.936	Nannospalax_galili
ENSPCIG00000018560	-	95	97.917	ENSNBRG00000012904	si:ch73-14h10.2	100	97.917	Neolamprologus_brichardi
ENSPCIG00000018560	-	95	98.936	ENSNLEG00000035542	LSM2	99	98.936	Nomascus_leucogenys
ENSPCIG00000018560	-	72	100.000	ENSMEUG00000003419	LSM2	100	100.000	Notamacropus_eugenii
ENSPCIG00000018560	-	95	98.936	ENSOPRG00000003668	LSM2	99	98.936	Ochotona_princeps
ENSPCIG00000018560	-	95	98.936	ENSODEG00000017583	LSM2	99	98.936	Octodon_degus
ENSPCIG00000018560	-	95	100.000	ENSONIG00000019321	si:ch73-14h10.2	99	100.000	Oreochromis_niloticus
ENSPCIG00000018560	-	95	98.936	ENSOANG00000005398	LSM2	100	98.936	Ornithorhynchus_anatinus
ENSPCIG00000018560	-	95	98.936	ENSOCUG00000002583	LSM2	99	98.936	Oryctolagus_cuniculus
ENSPCIG00000018560	-	95	100.000	ENSORLG00000029858	si:ch73-14h10.2	99	100.000	Oryzias_latipes
ENSPCIG00000018560	-	95	76.423	ENSORLG00015000465	si:ch73-14h10.2	99	76.423	Oryzias_latipes_hsok
ENSPCIG00000018560	-	95	100.000	ENSOMEG00000002892	si:ch73-14h10.2	99	100.000	Oryzias_melastigma
ENSPCIG00000018560	-	95	98.936	ENSOARG00000004575	LSM2	100	98.936	Ovis_aries
ENSPCIG00000018560	-	95	98.936	ENSPPAG00000032431	LSM2	99	98.936	Pan_paniscus
ENSPCIG00000018560	-	76	85.333	ENSPPAG00000043941	-	93	85.333	Pan_paniscus
ENSPCIG00000018560	-	95	98.936	ENSPPRG00000015353	LSM2	99	98.936	Panthera_pardus
ENSPCIG00000018560	-	95	98.936	ENSPTIG00000010303	LSM2	99	98.936	Panthera_tigris_altaica
ENSPCIG00000018560	-	95	98.936	ENSPTRG00000017986	LSM2	99	98.936	Pan_troglodytes
ENSPCIG00000018560	-	95	98.936	ENSPANG00000024577	LSM2	99	98.936	Papio_anubis
ENSPCIG00000018560	-	95	100.000	ENSPKIG00000007028	si:ch73-14h10.2	99	100.000	Paramormyrops_kingsleyae
ENSPCIG00000018560	-	95	98.936	ENSPSIG00000004458	LSM2	78	98.936	Pelodiscus_sinensis
ENSPCIG00000018560	-	95	97.872	ENSPMGG00000018511	si:ch73-14h10.2	100	97.872	Periophthalmus_magnuspinnatus
ENSPCIG00000018560	-	95	100.000	ENSPFOG00000001621	si:ch73-14h10.2	99	100.000	Poecilia_formosa
ENSPCIG00000018560	-	95	100.000	ENSPLAG00000017165	si:ch73-14h10.2	99	100.000	Poecilia_latipinna
ENSPCIG00000018560	-	95	100.000	ENSPMEG00000019574	si:ch73-14h10.2	99	100.000	Poecilia_mexicana
ENSPCIG00000018560	-	95	98.936	ENSPREG00000016534	si:ch73-14h10.2	100	98.936	Poecilia_reticulata
ENSPCIG00000018560	-	95	98.936	ENSPPYG00000016461	-	53	98.936	Pongo_abelii
ENSPCIG00000018560	-	95	98.936	ENSPCAG00000013737	LSM2	99	98.936	Procavia_capensis
ENSPCIG00000018560	-	95	98.936	ENSPCOG00000020134	LSM2	99	98.936	Propithecus_coquereli
ENSPCIG00000018560	-	95	98.936	ENSPVAG00000012405	LSM2	99	98.936	Pteropus_vampyrus
ENSPCIG00000018560	-	95	100.000	ENSPNYG00000019298	smx5	99	100.000	Pundamilia_nyererei
ENSPCIG00000018560	-	95	100.000	ENSPNAG00000027769	si:ch73-14h10.2	99	100.000	Pygocentrus_nattereri
ENSPCIG00000018560	-	95	98.936	ENSRNOG00000048725	Lsm2	99	98.936	Rattus_norvegicus
ENSPCIG00000018560	-	54	92.453	ENSRNOG00000011065	AC126899.1	76	92.453	Rattus_norvegicus
ENSPCIG00000018560	-	76	85.333	ENSRBIG00000011356	-	91	85.333	Rhinopithecus_bieti
ENSPCIG00000018560	-	95	98.936	ENSRBIG00000010172	LSM2	99	98.936	Rhinopithecus_bieti
ENSPCIG00000018560	-	95	98.936	ENSRROG00000030345	LSM2	99	98.936	Rhinopithecus_roxellana
ENSPCIG00000018560	-	76	85.333	ENSRROG00000030708	-	91	85.333	Rhinopithecus_roxellana
ENSPCIG00000018560	-	95	63.830	YBL026W	LSM2	99	63.830	Saccharomyces_cerevisiae
ENSPCIG00000018560	-	95	98.936	ENSSBOG00000018943	LSM2	99	98.936	Saimiri_boliviensis_boliviensis
ENSPCIG00000018560	-	95	100.000	ENSSFOG00015006734	lsm2	99	100.000	Scleropages_formosus
ENSPCIG00000018560	-	95	98.936	ENSSMAG00000001122	si:ch73-14h10.2	99	98.936	Scophthalmus_maximus
ENSPCIG00000018560	-	95	100.000	ENSSDUG00000021605	smx5	99	100.000	Seriola_dumerili
ENSPCIG00000018560	-	95	100.000	ENSSLDG00000002765	si:ch73-14h10.2	99	100.000	Seriola_lalandi_dorsalis
ENSPCIG00000018560	-	95	100.000	ENSSPUG00000009631	LSM2	99	100.000	Sphenodon_punctatus
ENSPCIG00000018560	-	95	100.000	ENSSPAG00000016904	si:ch73-14h10.2	99	100.000	Stegastes_partitus
ENSPCIG00000018560	-	95	98.936	ENSSSCG00000039021	LSM2	99	98.936	Sus_scrofa
ENSPCIG00000018560	-	95	98.936	ENSTRUG00000002093	si:ch73-14h10.2	100	98.936	Takifugu_rubripes
ENSPCIG00000018560	-	67	95.455	ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	Tetraodon_nigroviridis
ENSPCIG00000018560	-	95	98.936	ENSTTRG00000014131	LSM2	99	98.936	Tursiops_truncatus
ENSPCIG00000018560	-	95	98.936	ENSUMAG00000013425	LSM2	65	98.936	Ursus_maritimus
ENSPCIG00000018560	-	95	98.936	ENSVPAG00000001761	LSM2	100	98.936	Vicugna_pacos
ENSPCIG00000018560	-	76	97.333	ENSVVUG00000016264	-	93	97.333	Vulpes_vulpes
ENSPCIG00000018560	-	95	98.936	ENSXETG00000024077	lsm2	99	98.936	Xenopus_tropicalis
ENSPCIG00000018560	-	95	98.936	ENSXCOG00000006078	si:ch73-14h10.2	100	98.936	Xiphophorus_couchianus
ENSPCIG00000018560	-	95	98.936	ENSXMAG00000028018	si:ch73-14h10.2	100	98.936	Xiphophorus_maculatus