EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000018938 (Gene tree)
Gene ID: 110211921
Gene Symbol: SMG5
Alias: -
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 30885 bases
Position: chrFUWB01000351.1:86463-117347
Accession: 110211921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000025186	EST1	PF10374.9	5.2e-24	1	1
ENSPCIP00000025186	EST1_DNA_bind	PF10373.9	4.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000031001	SMG5-201	3632	-	ENSPCIP00000025186	1017 (aa)	XP_020847188	UPI000A280C92

Gene Model

Click here to download ENSPCIG00000018938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000018938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000018938	SMG5	100	89.882	ENSG00000198952	SMG5	100	89.489	Homo_sapiens
ENSPCIG00000018938	SMG5	99	66.929	ENSAPOG00000019690	smg5	92	77.069	Acanthochromis_polyacanthus
ENSPCIG00000018938	SMG5	98	86.821	ENSAMEG00000014458	SMG5	100	85.485	Ailuropoda_melanoleuca
ENSPCIG00000018938	SMG5	99	64.914	ENSACIG00000001353	smg5	99	65.962	Amphilophus_citrinellus
ENSPCIG00000018938	SMG5	99	64.306	ENSAOCG00000019483	smg5	98	64.376	Amphiprion_ocellaris
ENSPCIG00000018938	SMG5	99	65.625	ENSAPEG00000022949	smg5	99	65.856	Amphiprion_percula
ENSPCIG00000018938	SMG5	99	65.541	ENSATEG00000005348	smg5	99	67.610	Anabas_testudineus
ENSPCIG00000018938	SMG5	98	80.526	ENSAPLG00000010263	SMG5	100	80.214	Anas_platyrhynchos
ENSPCIG00000018938	SMG5	100	89.686	ENSANAG00000032899	SMG5	100	89.293	Aotus_nancymaae
ENSPCIG00000018938	SMG5	99	65.096	ENSACLG00000009311	smg5	99	65.601	Astatotilapia_calliptera
ENSPCIG00000018938	SMG5	99	43.738	ENSBTAG00000021747	-	99	43.671	Bos_taurus
ENSPCIG00000018938	SMG5	100	88.212	ENSBTAG00000009435	SMG5	100	89.096	Bos_taurus
ENSPCIG00000018938	SMG5	100	89.784	ENSCJAG00000005684	SMG5	100	89.391	Callithrix_jacchus
ENSPCIG00000018938	SMG5	100	88.507	ENSCAFG00000016839	SMG5	100	88.016	Canis_familiaris
ENSPCIG00000018938	SMG5	100	88.507	ENSCAFG00020006061	SMG5	100	88.016	Canis_lupus_dingo
ENSPCIG00000018938	SMG5	99	44.401	ENSCHIG00000006323	-	99	44.282	Capra_hircus
ENSPCIG00000018938	SMG5	100	88.016	ENSCHIG00000007709	SMG5	100	88.900	Capra_hircus
ENSPCIG00000018938	SMG5	100	89.489	ENSTSYG00000004099	SMG5	100	89.096	Carlito_syrichta
ENSPCIG00000018938	SMG5	97	66.261	ENSCAPG00000003631	SMG5	100	68.568	Cavia_aperea
ENSPCIG00000018938	SMG5	100	87.929	ENSCPOG00000015696	SMG5	100	88.714	Cavia_porcellus
ENSPCIG00000018938	SMG5	100	89.882	ENSCCAG00000027409	SMG5	100	89.489	Cebus_capucinus
ENSPCIG00000018938	SMG5	100	89.980	ENSCATG00000030539	SMG5	100	89.587	Cercocebus_atys
ENSPCIG00000018938	SMG5	100	88.616	ENSCLAG00000003983	SMG5	100	89.401	Chinchilla_lanigera
ENSPCIG00000018938	SMG5	100	89.980	ENSCSAG00000002120	SMG5	100	89.587	Chlorocebus_sabaeus
ENSPCIG00000018938	SMG5	54	87.004	ENSCHOG00000008741	-	57	87.004	Choloepus_hoffmanni
ENSPCIG00000018938	SMG5	94	79.006	ENSCPBG00000025848	SMG5	100	80.142	Chrysemys_picta_bellii
ENSPCIG00000018938	SMG5	94	34.677	ENSCING00000008706	-	99	34.619	Ciona_intestinalis
ENSPCIG00000018938	SMG5	100	85.953	ENSCANG00000029208	SMG5	100	85.560	Colobus_angolensis_palliatus
ENSPCIG00000018938	SMG5	100	86.555	ENSCGRG00001006336	Smg5	100	86.850	Cricetulus_griseus_chok1gshd
ENSPCIG00000018938	SMG5	98	86.432	ENSCGRG00000005111	Smg5	100	86.720	Cricetulus_griseus_crigri
ENSPCIG00000018938	SMG5	99	64.717	ENSCSEG00000014220	smg5	99	65.324	Cynoglossus_semilaevis
ENSPCIG00000018938	SMG5	99	59.745	ENSCVAG00000000529	smg5	99	60.254	Cyprinodon_variegatus
ENSPCIG00000018938	SMG5	92	36.402	ENSDNOG00000039862	-	100	36.296	Dasypus_novemcinctus
ENSPCIG00000018938	SMG5	100	85.756	ENSDNOG00000000051	SMG5	100	85.363	Dasypus_novemcinctus
ENSPCIG00000018938	SMG5	100	89.205	ENSDORG00000010382	Smg5	100	88.518	Dipodomys_ordii
ENSPCIG00000018938	SMG5	79	38.168	FBgn0019890	Smg5	60	38.168	Drosophila_melanogaster
ENSPCIG00000018938	SMG5	82	95.146	ENSETEG00000010336	SMG5	91	95.146	Echinops_telfairi
ENSPCIG00000018938	SMG5	90	47.071	ENSEBUG00000003739	smg5	98	47.335	Eptatretus_burgeri
ENSPCIG00000018938	SMG5	100	89.489	ENSEASG00005019122	SMG5	100	89.096	Equus_asinus_asinus
ENSPCIG00000018938	SMG5	100	89.489	ENSECAG00000001389	SMG5	100	89.096	Equus_caballus
ENSPCIG00000018938	SMG5	72	97.118	ENSEEUG00000012690	SMG5	75	97.118	Erinaceus_europaeus
ENSPCIG00000018938	SMG5	99	65.247	ENSELUG00000012585	smg5	99	64.860	Esox_lucius
ENSPCIG00000018938	SMG5	100	88.212	ENSFCAG00000011783	SMG5	100	87.623	Felis_catus
ENSPCIG00000018938	SMG5	58	83.000	ENSFALG00000001166	-	99	83.000	Ficedula_albicollis
ENSPCIG00000018938	SMG5	98	87.324	ENSFDAG00000017388	SMG5	100	87.525	Fukomys_damarensis
ENSPCIG00000018938	SMG5	97	60.808	ENSFHEG00000013939	smg5	100	60.808	Fundulus_heteroclitus
ENSPCIG00000018938	SMG5	99	78.633	ENSGALG00000029918	-	100	77.281	Gallus_gallus
ENSPCIG00000018938	SMG5	100	80.777	ENSGAGG00000016131	SMG5	100	80.645	Gopherus_agassizii
ENSPCIG00000018938	SMG5	100	89.980	ENSGGOG00000010932	SMG5	100	89.587	Gorilla_gorilla
ENSPCIG00000018938	SMG5	99	65.038	ENSHBUG00000008654	smg5	99	65.990	Haplochromis_burtoni
ENSPCIG00000018938	SMG5	100	87.242	ENSHGLG00000019152	SMG5	100	87.439	Heterocephalus_glaber_female
ENSPCIG00000018938	SMG5	90	87.856	ENSHGLG00100015948	SMG5	99	88.074	Heterocephalus_glaber_male
ENSPCIG00000018938	SMG5	87	72.182	ENSHCOG00000010229	smg5	92	72.222	Hippocampus_comes
ENSPCIG00000018938	SMG5	99	62.580	ENSIPUG00000006624	Smg5	99	62.970	Ictalurus_punctatus
ENSPCIG00000018938	SMG5	100	88.998	ENSSTOG00000001780	SMG5	100	88.605	Ictidomys_tridecemlineatus
ENSPCIG00000018938	SMG5	100	87.549	ENSJJAG00000022763	Smg5	100	87.353	Jaculus_jaculus
ENSPCIG00000018938	SMG5	50	60.806	ENSKMAG00000014586	smg5	99	62.411	Kryptolebias_marmoratus
ENSPCIG00000018938	SMG5	99	65.507	ENSLBEG00000002145	smg5	99	66.117	Labrus_bergylta
ENSPCIG00000018938	SMG5	100	65.872	ENSLACG00000010521	SMG5	100	65.682	Latimeria_chalumnae
ENSPCIG00000018938	SMG5	54	51.495	ENSLOCG00000008380	smg5	99	62.043	Lepisosteus_oculatus
ENSPCIG00000018938	SMG5	100	88.114	ENSLAFG00000006241	SMG5	100	87.721	Loxodonta_africana
ENSPCIG00000018938	SMG5	100	89.882	ENSMFAG00000045357	SMG5	100	89.489	Macaca_fascicularis
ENSPCIG00000018938	SMG5	100	89.784	ENSMMUG00000000090	SMG5	100	89.391	Macaca_mulatta
ENSPCIG00000018938	SMG5	100	89.784	ENSMNEG00000044425	SMG5	100	89.391	Macaca_nemestrina
ENSPCIG00000018938	SMG5	100	83.757	ENSMLEG00000041192	SMG5	100	83.366	Mandrillus_leucophaeus
ENSPCIG00000018938	SMG5	99	61.862	ENSMAMG00000010683	smg5	100	62.193	Mastacembelus_armatus
ENSPCIG00000018938	SMG5	63	58.595	ENSMZEG00005016543	smg5	100	58.094	Maylandia_zebra
ENSPCIG00000018938	SMG5	99	63.429	ENSMZEG00005015815	smg5	99	64.012	Maylandia_zebra
ENSPCIG00000018938	SMG5	55	43.979	ENSMAUG00000000043	-	96	43.599	Mesocricetus_auratus
ENSPCIG00000018938	SMG5	100	86.261	ENSMAUG00000010381	Smg5	100	86.555	Mesocricetus_auratus
ENSPCIG00000018938	SMG5	100	89.980	ENSMICG00000002257	SMG5	100	89.587	Microcebus_murinus
ENSPCIG00000018938	SMG5	100	86.288	ENSMOCG00000016590	Smg5	100	85.798	Microtus_ochrogaster
ENSPCIG00000018938	SMG5	99	58.528	ENSMMOG00000017199	smg5	99	59.066	Mola_mola
ENSPCIG00000018938	SMG5	81	37.915	ENSMODG00000004532	-	89	37.709	Monodelphis_domestica
ENSPCIG00000018938	SMG5	87	97.973	ENSMODG00000016901	SMG5	98	97.973	Monodelphis_domestica
ENSPCIG00000018938	SMG5	97	34.642	ENSMODG00000004511	-	99	34.483	Monodelphis_domestica
ENSPCIG00000018938	SMG5	77	37.371	ENSMODG00000010675	-	85	37.076	Monodelphis_domestica
ENSPCIG00000018938	SMG5	77	38.845	ENSMODG00000004735	-	86	38.933	Monodelphis_domestica
ENSPCIG00000018938	SMG5	99	60.000	ENSMALG00000010375	smg5	99	59.552	Monopterus_albus
ENSPCIG00000018938	SMG5	100	86.555	MGP_CAROLIEiJ_G0025163	Smg5	100	98.324	Mus_caroli
ENSPCIG00000018938	SMG5	100	86.752	ENSMUSG00000001415	Smg5	99	98.324	Mus_musculus
ENSPCIG00000018938	SMG5	100	86.275	MGP_PahariEiJ_G0026606	Smg5	100	98.324	Mus_pahari
ENSPCIG00000018938	SMG5	100	86.555	MGP_SPRETEiJ_G0026104	Smg5	100	98.324	Mus_spretus
ENSPCIG00000018938	SMG5	94	84.874	ENSMPUG00000004546	SMG5	100	85.819	Mustela_putorius_furo
ENSPCIG00000018938	SMG5	100	87.879	ENSMLUG00000008518	SMG5	100	87.977	Myotis_lucifugus
ENSPCIG00000018938	SMG5	100	88.114	ENSNGAG00000020706	Smg5	100	88.114	Nannospalax_galili
ENSPCIG00000018938	SMG5	96	63.026	ENSNBRG00000004332	smg5	97	64.012	Neolamprologus_brichardi
ENSPCIG00000018938	SMG5	100	89.882	ENSNLEG00000012439	SMG5	100	89.489	Nomascus_leucogenys
ENSPCIG00000018938	SMG5	100	96.165	ENSMEUG00000012834	SMG5	100	96.165	Notamacropus_eugenii
ENSPCIG00000018938	SMG5	100	88.016	ENSOPRG00000009152	SMG5	100	87.623	Ochotona_princeps
ENSPCIG00000018938	SMG5	100	88.998	ENSODEG00000012237	SMG5	100	88.998	Octodon_degus
ENSPCIG00000018938	SMG5	99	60.444	ENSONIG00000008632	smg5	99	61.285	Oreochromis_niloticus
ENSPCIG00000018938	SMG5	98	89.738	ENSOCUG00000012886	SMG5	100	89.336	Oryctolagus_cuniculus
ENSPCIG00000018938	SMG5	89	40.894	ENSOCUG00000023338	-	99	40.502	Oryctolagus_cuniculus
ENSPCIG00000018938	SMG5	50	59.381	ENSORLG00000016239	smg5	99	62.116	Oryzias_latipes
ENSPCIG00000018938	SMG5	99	64.798	ENSORLG00020013127	smg5	99	66.012	Oryzias_latipes_hni
ENSPCIG00000018938	SMG5	99	65.000	ENSORLG00015019014	smg5	99	66.503	Oryzias_latipes_hsok
ENSPCIG00000018938	SMG5	81	58.085	ENSOMEG00000021330	smg5	92	60.518	Oryzias_melastigma
ENSPCIG00000018938	SMG5	100	88.605	ENSOGAG00000004966	SMG5	100	88.212	Otolemur_garnettii
ENSPCIG00000018938	SMG5	99	44.261	ENSOARG00000011963	-	99	44.043	Ovis_aries
ENSPCIG00000018938	SMG5	100	88.114	ENSOARG00000005778	SMG5	100	88.998	Ovis_aries
ENSPCIG00000018938	SMG5	100	90.079	ENSPPAG00000011996	SMG5	100	89.686	Pan_paniscus
ENSPCIG00000018938	SMG5	98	87.827	ENSPPRG00000011901	SMG5	100	87.324	Panthera_pardus
ENSPCIG00000018938	SMG5	96	81.753	ENSPTIG00000007892	SMG5	98	81.142	Panthera_tigris_altaica
ENSPCIG00000018938	SMG5	100	90.079	ENSPTRG00000049282	-	100	89.686	Pan_troglodytes
ENSPCIG00000018938	SMG5	100	90.079	ENSPTRG00000023925	SMG5	100	89.686	Pan_troglodytes
ENSPCIG00000018938	SMG5	100	89.980	ENSPANG00000011201	SMG5	100	89.587	Papio_anubis
ENSPCIG00000018938	SMG5	99	65.661	ENSPKIG00000009402	smg5	99	65.689	Paramormyrops_kingsleyae
ENSPCIG00000018938	SMG5	98	81.962	ENSPSIG00000015198	SMG5	100	81.845	Pelodiscus_sinensis
ENSPCIG00000018938	SMG5	99	59.761	ENSPMGG00000010465	smg5	99	59.797	Periophthalmus_magnuspinnatus
ENSPCIG00000018938	SMG5	56	45.439	ENSPEMG00000010022	-	95	44.178	Peromyscus_maniculatus_bairdii
ENSPCIG00000018938	SMG5	100	86.654	ENSPEMG00000001819	Smg5	100	86.948	Peromyscus_maniculatus_bairdii
ENSPCIG00000018938	SMG5	99	50.530	ENSPMAG00000000410	smg5	100	51.374	Petromyzon_marinus
ENSPCIG00000018938	SMG5	50	60.695	ENSPFOG00000010191	smg5	99	61.746	Poecilia_formosa
ENSPCIG00000018938	SMG5	50	60.329	ENSPLAG00000009332	smg5	99	61.386	Poecilia_latipinna
ENSPCIG00000018938	SMG5	99	64.774	ENSPMEG00000014105	smg5	99	65.541	Poecilia_mexicana
ENSPCIG00000018938	SMG5	93	69.142	ENSPREG00000017713	smg5	99	61.296	Poecilia_reticulata
ENSPCIG00000018938	SMG5	100	90.177	ENSPPYG00000000723	SMG5	100	89.784	Pongo_abelii
ENSPCIG00000018938	SMG5	75	92.818	ENSPCAG00000008412	SMG5	81	92.818	Procavia_capensis
ENSPCIG00000018938	SMG5	100	89.587	ENSPCOG00000004741	SMG5	100	89.194	Propithecus_coquereli
ENSPCIG00000018938	SMG5	100	79.666	ENSPVAG00000016748	SMG5	100	80.845	Pteropus_vampyrus
ENSPCIG00000018938	SMG5	99	60.617	ENSPNYG00000013397	smg5	99	61.333	Pundamilia_nyererei
ENSPCIG00000018938	SMG5	99	62.013	ENSPNAG00000028363	smg5	99	62.752	Pygocentrus_nattereri
ENSPCIG00000018938	SMG5	100	86.850	ENSRNOG00000019590	Smg5	100	86.948	Rattus_norvegicus
ENSPCIG00000018938	SMG5	100	89.686	ENSRBIG00000027428	SMG5	100	89.293	Rhinopithecus_bieti
ENSPCIG00000018938	SMG5	100	89.587	ENSRROG00000030035	SMG5	100	89.194	Rhinopithecus_roxellana
ENSPCIG00000018938	SMG5	100	89.980	ENSSBOG00000033339	SMG5	100	89.587	Saimiri_boliviensis_boliviensis
ENSPCIG00000018938	SMG5	98	97.197	ENSSHAG00000014163	SMG5	100	97.197	Sarcophilus_harrisii
ENSPCIG00000018938	SMG5	65	41.379	ENSSHAG00000000935	-	85	39.798	Sarcophilus_harrisii
ENSPCIG00000018938	SMG5	99	34.146	ENSSHAG00000009572	-	79	43.860	Sarcophilus_harrisii
ENSPCIG00000018938	SMG5	86	39.895	ENSSHAG00000000561	-	86	39.895	Sarcophilus_harrisii
ENSPCIG00000018938	SMG5	99	66.179	ENSSFOG00015024175	smg5	99	66.993	Scleropages_formosus
ENSPCIG00000018938	SMG5	99	60.749	ENSSMAG00000013059	smg5	99	61.374	Scophthalmus_maximus
ENSPCIG00000018938	SMG5	50	60.989	ENSSDUG00000007122	smg5	55	57.929	Seriola_dumerili
ENSPCIG00000018938	SMG5	91	76.850	ENSSLDG00000011418	smg5	92	77.804	Seriola_lalandi_dorsalis
ENSPCIG00000018938	SMG5	90	77.040	ENSSARG00000012484	SMG5	100	76.605	Sorex_araneus
ENSPCIG00000018938	SMG5	94	78.969	ENSSPUG00000002260	SMG5	100	78.441	Sphenodon_punctatus
ENSPCIG00000018938	SMG5	99	65.179	ENSSPAG00000014266	smg5	98	65.268	Stegastes_partitus
ENSPCIG00000018938	SMG5	100	89.882	ENSSSCG00000006490	-	100	89.489	Sus_scrofa
ENSPCIG00000018938	SMG5	52	37.336	ENSSSCG00000037182	-	85	37.571	Sus_scrofa
ENSPCIG00000018938	SMG5	99	68.996	ENSSSCG00000039308	-	100	70.177	Sus_scrofa
ENSPCIG00000018938	SMG5	99	82.034	ENSTGUG00000003748	-	100	81.774	Taeniopygia_guttata
ENSPCIG00000018938	SMG5	92	74.419	ENSTRUG00000012580	smg5	99	64.078	Takifugu_rubripes
ENSPCIG00000018938	SMG5	99	65.625	ENSTNIG00000010303	smg5	99	64.752	Tetraodon_nigroviridis
ENSPCIG00000018938	SMG5	60	99.015	ENSTBEG00000002777	SMG5	57	99.015	Tupaia_belangeri
ENSPCIG00000018938	SMG5	100	84.872	ENSTTRG00000001401	SMG5	100	84.479	Tursiops_truncatus
ENSPCIG00000018938	SMG5	100	87.623	ENSUAMG00000013721	SMG5	100	86.640	Ursus_americanus
ENSPCIG00000018938	SMG5	98	83.049	ENSUMAG00000018041	SMG5	97	82.046	Ursus_maritimus
ENSPCIG00000018938	SMG5	98	80.665	ENSVPAG00000009446	SMG5	99	80.262	Vicugna_pacos
ENSPCIG00000018938	SMG5	100	88.409	ENSVVUG00000005887	SMG5	100	87.917	Vulpes_vulpes
ENSPCIG00000018938	SMG5	77	66.121	ENSXETG00000033791	SMG5	99	65.365	Xenopus_tropicalis
ENSPCIG00000018938	SMG5	99	64.500	ENSXMAG00000013499	smg5	99	65.336	Xiphophorus_maculatus