EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000018955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 1419 bases
Position: chrFUWB01000428.1:1591708-1593126
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	1	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	2	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	3	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	4	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	5	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	6	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	7	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	8	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	9	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	10	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	11	12
ENSPCIP00000025209	zf-C2H2	PF00096.26	2.8e-82	12	12
ENSPCIP00000025209	zf-met	PF12874.7	3.4e-08	1	4
ENSPCIP00000025209	zf-met	PF12874.7	3.4e-08	2	4
ENSPCIP00000025209	zf-met	PF12874.7	3.4e-08	3	4
ENSPCIP00000025209	zf-met	PF12874.7	3.4e-08	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000031024	-	1419	-	ENSPCIP00000025209	472 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000018955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000018955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000018955	-	99	60.328	ENSPCIG00000018929	-	94	61.968
ENSPCIG00000018955	-	97	53.911	ENSPCIG00000023846	-	88	54.386
ENSPCIG00000018955	-	92	45.405	ENSPCIG00000012353	-	83	45.405
ENSPCIG00000018955	-	99	58.997	ENSPCIG00000019488	-	80	58.997
ENSPCIG00000018955	-	92	39.886	ENSPCIG00000007127	ZNF319	92	39.886
ENSPCIG00000018955	-	87	55.172	ENSPCIG00000023849	-	82	55.172
ENSPCIG00000018955	-	76	41.758	ENSPCIG00000006893	-	70	41.758
ENSPCIG00000018955	-	90	51.952	ENSPCIG00000010622	-	73	51.952
ENSPCIG00000018955	-	75	60.262	ENSPCIG00000023004	-	72	60.262
ENSPCIG00000018955	-	79	61.638	ENSPCIG00000023002	-	79	61.638
ENSPCIG00000018955	-	97	53.110	ENSPCIG00000002836	-	96	53.110
ENSPCIG00000018955	-	75	38.747	ENSPCIG00000013076	ZNF628	57	48.018
ENSPCIG00000018955	-	87	59.512	ENSPCIG00000018902	-	89	54.694
ENSPCIG00000018955	-	95	48.864	ENSPCIG00000012429	-	83	49.652
ENSPCIG00000018955	-	94	52.823	ENSPCIG00000009423	-	99	52.823
ENSPCIG00000018955	-	94	59.064	ENSPCIG00000022058	-	89	59.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000018955	-	83	55.556	ENSACLG00000020975	-	85	51.495	Astatotilapia_calliptera
ENSPCIG00000018955	-	75	61.149	ENSAMXG00000017609	-	77	61.149	Astyanax_mexicanus
ENSPCIG00000018955	-	77	48.580	ENSEBUG00000005258	-	84	48.580	Eptatretus_burgeri
ENSPCIG00000018955	-	95	47.044	ENSEBUG00000010952	-	68	52.744	Eptatretus_burgeri
ENSPCIG00000018955	-	84	52.450	ENSEBUG00000009208	-	63	52.450	Eptatretus_burgeri
ENSPCIG00000018955	-	70	57.616	ENSGAGG00000001387	-	56	57.616	Gopherus_agassizii
ENSPCIG00000018955	-	99	90.851	ENSSHAG00000014216	-	99	90.851	Sarcophilus_harrisii
ENSPCIG00000018955	-	96	62.346	ENSTGUG00000018385	-	100	62.346	Taeniopygia_guttata
ENSPCIG00000018955	-	99	57.705	ENSTGUG00000016220	-	100	57.705	Taeniopygia_guttata
ENSPCIG00000018955	-	95	60.526	ENSTGUG00000014292	-	99	60.526	Taeniopygia_guttata
ENSPCIG00000018955	-	89	61.465	ENSUMAG00000019336	-	100	61.465	Ursus_maritimus