EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000019242 (Gene tree)
Gene ID: 110199713
Gene Symbol: LARP1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 56008 bases
Position: chrFUWB01001191.1:1448185-1504192
Accession: 29531
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000025572	La	PF05383.17	1.5e-20	1	1
ENSPCIP00000025571	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000031488	LARP1-202	3963	-	ENSPCIP00000025572	1107 (aa)	-	-
ENSPCIT00000031487	LARP1-201	4146	-	ENSPCIP00000025571	1168 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000019242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000019242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000019242	LARP1	74	62.892	ENSPCIG00000026516	LARP1B	98	67.655

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000019242	LARP1	80	88.119	ENSG00000155506	LARP1	89	94.444	Homo_sapiens
ENSPCIG00000019242	LARP1	81	81.448	ENSAPOG00000020685	larp1	99	81.448	Acanthochromis_polyacanthus
ENSPCIG00000019242	LARP1	76	89.109	ENSAMEG00000016673	LARP1	99	82.636	Ailuropoda_melanoleuca
ENSPCIG00000019242	LARP1	90	64.382	ENSACIG00000012994	larp1	94	77.483	Amphilophus_citrinellus
ENSPCIG00000019242	LARP1	68	73.309	ENSAOCG00000007792	larp1	96	73.544	Amphiprion_ocellaris
ENSPCIG00000019242	LARP1	89	66.914	ENSAPEG00000022246	larp1	97	66.853	Amphiprion_percula
ENSPCIG00000019242	LARP1	89	65.348	ENSATEG00000013523	larp1	95	67.012	Anabas_testudineus
ENSPCIG00000019242	LARP1	73	90.909	ENSAPLG00000007559	LARP1	99	88.262	Anas_platyrhynchos
ENSPCIG00000019242	LARP1	80	85.180	ENSACAG00000004071	LARP1	98	83.687	Anolis_carolinensis
ENSPCIG00000019242	LARP1	80	88.543	ENSANAG00000029949	LARP1	99	80.271	Aotus_nancymaae
ENSPCIG00000019242	LARP1	89	65.838	ENSACLG00000015256	larp1	95	69.729	Astatotilapia_calliptera
ENSPCIG00000019242	LARP1	80	72.299	ENSAMXG00000000859	larp1	88	72.377	Astyanax_mexicanus
ENSPCIG00000019242	LARP1	88	80.322	ENSBTAG00000008443	LARP1	99	77.998	Bos_taurus
ENSPCIG00000019242	LARP1	89	88.402	ENSCJAG00000004454	LARP1	99	78.449	Callithrix_jacchus
ENSPCIG00000019242	LARP1	75	90.936	ENSCAFG00000017639	LARP1	99	82.809	Canis_familiaris
ENSPCIG00000019242	LARP1	69	90.936	ENSCAFG00020023860	LARP1	99	82.774	Canis_lupus_dingo
ENSPCIG00000019242	LARP1	89	79.906	ENSCHIG00000014414	LARP1	99	78.285	Capra_hircus
ENSPCIG00000019242	LARP1	80	83.281	ENSTSYG00000013732	LARP1	99	81.917	Carlito_syrichta
ENSPCIG00000019242	LARP1	69	87.649	ENSCAPG00000013865	LARP1	87	83.019	Cavia_aperea
ENSPCIG00000019242	LARP1	76	88.967	ENSCPOG00000003377	LARP1	99	82.686	Cavia_porcellus
ENSPCIG00000019242	LARP1	80	88.543	ENSCCAG00000025201	LARP1	99	78.179	Cebus_capucinus
ENSPCIG00000019242	LARP1	78	89.971	ENSCATG00000030675	LARP1	99	76.952	Cercocebus_atys
ENSPCIG00000019242	LARP1	77	87.967	ENSCLAG00000012755	LARP1	98	82.037	Chinchilla_lanigera
ENSPCIG00000019242	LARP1	71	82.619	ENSCSAG00000010800	LARP1	99	81.352	Chlorocebus_sabaeus
ENSPCIG00000019242	LARP1	76	77.463	ENSCHOG00000012716	LARP1	98	71.649	Choloepus_hoffmanni
ENSPCIG00000019242	LARP1	80	87.433	ENSCPBG00000002173	LARP1	90	87.417	Chrysemys_picta_bellii
ENSPCIG00000019242	LARP1	80	88.669	ENSCANG00000037418	LARP1	96	80.879	Colobus_angolensis_palliatus
ENSPCIG00000019242	LARP1	90	80.243	ENSCGRG00001016913	Larp1	97	79.381	Cricetulus_griseus_chok1gshd
ENSPCIG00000019242	LARP1	75	87.198	ENSCGRG00000009916	Larp1	94	85.953	Cricetulus_griseus_crigri
ENSPCIG00000019242	LARP1	89	66.075	ENSCSEG00000016431	larp1	96	66.075	Cynoglossus_semilaevis
ENSPCIG00000019242	LARP1	91	65.201	ENSCVAG00000022687	larp1	97	66.636	Cyprinodon_variegatus
ENSPCIG00000019242	LARP1	88	61.397	ENSDARG00000101722	larp1	92	67.910	Danio_rerio
ENSPCIG00000019242	LARP1	91	78.276	ENSDNOG00000012073	LARP1	99	78.167	Dasypus_novemcinctus
ENSPCIG00000019242	LARP1	77	82.589	ENSDORG00000002897	Larp1	96	82.701	Dipodomys_ordii
ENSPCIG00000019242	LARP1	73	90.476	ENSETEG00000020251	LARP1	100	85.585	Echinops_telfairi
ENSPCIG00000019242	LARP1	89	89.250	ENSEASG00005001070	LARP1	99	79.386	Equus_asinus_asinus
ENSPCIG00000019242	LARP1	89	81.412	ENSECAG00000017002	LARP1	78	80.325	Equus_caballus
ENSPCIG00000019242	LARP1	74	83.333	ENSEEUG00000001065	LARP1	99	77.873	Erinaceus_europaeus
ENSPCIG00000019242	LARP1	89	64.585	ENSELUG00000019403	larp1	97	65.238	Esox_lucius
ENSPCIG00000019242	LARP1	87	91.082	ENSFCAG00000000592	LARP1	99	78.257	Felis_catus
ENSPCIG00000019242	LARP1	68	85.803	ENSFALG00000008335	LARP1	96	86.800	Ficedula_albicollis
ENSPCIG00000019242	LARP1	76	89.109	ENSFDAG00000021125	LARP1	98	83.991	Fukomys_damarensis
ENSPCIG00000019242	LARP1	59	56.742	ENSFHEG00000020307	larp1	97	63.687	Fundulus_heteroclitus
ENSPCIG00000019242	LARP1	90	81.569	ENSGALG00000040109	LARP1	98	81.474	Gallus_gallus
ENSPCIG00000019242	LARP1	89	90.286	ENSGAGG00000025113	LARP1	95	87.703	Gopherus_agassizii
ENSPCIG00000019242	LARP1	76	88.119	ENSGGOG00000006048	LARP1	93	82.563	Gorilla_gorilla
ENSPCIG00000019242	LARP1	89	66.543	ENSHBUG00000020762	larp1	97	70.504	Haplochromis_burtoni
ENSPCIG00000019242	LARP1	90	78.981	ENSHGLG00000006267	LARP1	98	78.981	Heterocephalus_glaber_female
ENSPCIG00000019242	LARP1	77	88.112	ENSHGLG00100014230	-	97	84.301	Heterocephalus_glaber_male
ENSPCIG00000019242	LARP1	86	67.520	ENSHGLG00100003395	-	90	70.378	Heterocephalus_glaber_male
ENSPCIG00000019242	LARP1	83	83.590	ENSHCOG00000010786	larp1	97	83.590	Hippocampus_comes
ENSPCIG00000019242	LARP1	85	64.865	ENSIPUG00000019105	Larp1	95	67.872	Ictalurus_punctatus
ENSPCIG00000019242	LARP1	76	83.465	ENSSTOG00000005678	LARP1	99	81.522	Ictidomys_tridecemlineatus
ENSPCIG00000019242	LARP1	89	74.717	ENSJJAG00000016950	Larp1	97	74.789	Jaculus_jaculus
ENSPCIG00000019242	LARP1	89	66.945	ENSKMAG00000018468	larp1	95	70.464	Kryptolebias_marmoratus
ENSPCIG00000019242	LARP1	90	65.381	ENSLBEG00000027172	larp1	97	64.948	Labrus_bergylta
ENSPCIG00000019242	LARP1	87	71.330	ENSLOCG00000012457	larp1	99	71.527	Lepisosteus_oculatus
ENSPCIG00000019242	LARP1	89	86.584	ENSLAFG00000008991	LARP1	98	79.001	Loxodonta_africana
ENSPCIG00000019242	LARP1	79	82.766	ENSMFAG00000031651	LARP1	93	82.495	Macaca_fascicularis
ENSPCIG00000019242	LARP1	75	83.544	ENSMMUG00000009411	LARP1	100	80.634	Macaca_mulatta
ENSPCIG00000019242	LARP1	69	89.680	ENSMNEG00000039294	LARP1	99	82.267	Macaca_nemestrina
ENSPCIG00000019242	LARP1	78	89.971	ENSMLEG00000035142	LARP1	93	82.809	Mandrillus_leucophaeus
ENSPCIG00000019242	LARP1	89	66.331	ENSMAMG00000021788	larp1	97	65.746	Mastacembelus_armatus
ENSPCIG00000019242	LARP1	89	65.838	ENSMZEG00005009345	larp1	95	69.729	Maylandia_zebra
ENSPCIG00000019242	LARP1	77	85.980	ENSMGAG00000005696	LARP1	96	86.528	Meleagris_gallopavo
ENSPCIG00000019242	LARP1	90	80.243	ENSMAUG00000001385	Larp1	97	79.381	Mesocricetus_auratus
ENSPCIG00000019242	LARP1	76	89.533	ENSMICG00000000837	LARP1	99	85.055	Microcebus_murinus
ENSPCIG00000019242	LARP1	90	80.524	ENSMOCG00000008920	Larp1	97	79.663	Microtus_ochrogaster
ENSPCIG00000019242	LARP1	86	52.588	ENSMMOG00000013364	larp1	95	55.072	Mola_mola
ENSPCIG00000019242	LARP1	78	95.775	ENSMODG00000008663	LARP1	96	95.775	Monodelphis_domestica
ENSPCIG00000019242	LARP1	89	65.596	ENSMALG00000017180	larp1	94	72.150	Monopterus_albus
ENSPCIG00000019242	LARP1	90	79.475	MGP_CAROLIEiJ_G0016383	Larp1	97	79.381	Mus_caroli
ENSPCIG00000019242	LARP1	90	79.569	ENSMUSG00000037331	Larp1	97	79.569	Mus_musculus
ENSPCIG00000019242	LARP1	90	79.307	MGP_PahariEiJ_G0017518	Larp1	97	79.120	Mus_pahari
ENSPCIG00000019242	LARP1	90	79.756	MGP_SPRETEiJ_G0017225	Larp1	97	79.569	Mus_spretus
ENSPCIG00000019242	LARP1	76	78.370	ENSMPUG00000013564	LARP1	99	78.020	Mustela_putorius_furo
ENSPCIG00000019242	LARP1	77	83.657	ENSMLUG00000002608	LARP1	98	80.618	Myotis_lucifugus
ENSPCIG00000019242	LARP1	77	82.701	ENSNGAG00000001098	Larp1	96	82.701	Nannospalax_galili
ENSPCIG00000019242	LARP1	80	70.613	ENSNBRG00000008963	larp1	94	70.495	Neolamprologus_brichardi
ENSPCIG00000019242	LARP1	81	80.713	ENSNLEG00000016588	LARP1	99	82.905	Nomascus_leucogenys
ENSPCIG00000019242	LARP1	78	87.171	ENSMEUG00000002957	LARP1	97	87.500	Notamacropus_eugenii
ENSPCIG00000019242	LARP1	76	88.543	ENSOPRG00000013014	LARP1	97	83.996	Ochotona_princeps
ENSPCIG00000019242	LARP1	77	88.967	ENSODEG00000010824	LARP1	99	82.686	Octodon_degus
ENSPCIG00000019242	LARP1	89	67.166	ENSONIG00000017308	larp1	97	67.542	Oreochromis_niloticus
ENSPCIG00000019242	LARP1	79	88.859	ENSOANG00000005096	LARP1	97	87.474	Ornithorhynchus_anatinus
ENSPCIG00000019242	LARP1	90	80.522	ENSOCUG00000013066	LARP1	98	80.522	Oryctolagus_cuniculus
ENSPCIG00000019242	LARP1	90	64.585	ENSORLG00000000824	larp1	96	72.444	Oryzias_latipes
ENSPCIG00000019242	LARP1	90	64.492	ENSORLG00020022241	larp1	97	64.585	Oryzias_latipes_hni
ENSPCIG00000019242	LARP1	90	63.035	ENSORLG00015007538	larp1	97	64.711	Oryzias_latipes_hsok
ENSPCIG00000019242	LARP1	89	63.212	ENSOMEG00000003134	larp1	97	65.042	Oryzias_melastigma
ENSPCIG00000019242	LARP1	77	88.235	ENSOGAG00000016750	LARP1	97	84.159	Otolemur_garnettii
ENSPCIG00000019242	LARP1	77	83.351	ENSOARG00000009893	LARP1	99	81.703	Ovis_aries
ENSPCIG00000019242	LARP1	80	88.119	ENSPPAG00000042993	LARP1	96	80.879	Pan_paniscus
ENSPCIG00000019242	LARP1	78	88.904	ENSPPRG00000009780	LARP1	95	80.390	Panthera_pardus
ENSPCIG00000019242	LARP1	80	81.943	ENSPTIG00000007013	LARP1	95	80.390	Panthera_tigris_altaica
ENSPCIG00000019242	LARP1	80	88.119	ENSPTRG00000017447	LARP1	96	81.001	Pan_troglodytes
ENSPCIG00000019242	LARP1	78	89.971	ENSPANG00000008080	LARP1	96	81.186	Papio_anubis
ENSPCIG00000019242	LARP1	88	69.565	ENSPKIG00000010096	larp1	95	69.319	Paramormyrops_kingsleyae
ENSPCIG00000019242	LARP1	90	62.017	ENSPKIG00000017153	-	88	67.908	Paramormyrops_kingsleyae
ENSPCIG00000019242	LARP1	81	67.607	ENSPMGG00000011599	larp1	94	68.264	Periophthalmus_magnuspinnatus
ENSPCIG00000019242	LARP1	77	83.128	ENSPEMG00000022523	Larp1	96	83.128	Peromyscus_maniculatus_bairdii
ENSPCIG00000019242	LARP1	89	64.351	ENSPFOG00000005836	larp1	97	64.247	Poecilia_formosa
ENSPCIG00000019242	LARP1	89	65.088	ENSPLAG00000008936	larp1	97	64.614	Poecilia_latipinna
ENSPCIG00000019242	LARP1	89	64.587	ENSPMEG00000013656	larp1	97	64.072	Poecilia_mexicana
ENSPCIG00000019242	LARP1	78	69.158	ENSPREG00000005726	larp1	96	68.438	Poecilia_reticulata
ENSPCIG00000019242	LARP1	77	85.232	ENSPCAG00000006407	LARP1	97	81.514	Procavia_capensis
ENSPCIG00000019242	LARP1	75	80.058	ENSPCOG00000016949	LARP1	99	78.046	Propithecus_coquereli
ENSPCIG00000019242	LARP1	89	89.533	ENSPVAG00000002262	LARP1	99	78.058	Pteropus_vampyrus
ENSPCIG00000019242	LARP1	89	66.022	ENSPNYG00000007938	larp1	95	69.843	Pundamilia_nyererei
ENSPCIG00000019242	LARP1	88	66.058	ENSPNAG00000021427	larp1	90	72.152	Pygocentrus_nattereri
ENSPCIG00000019242	LARP1	77	83.147	ENSRNOG00000031544	Larp1	96	83.147	Rattus_norvegicus
ENSPCIG00000019242	LARP1	78	89.971	ENSRBIG00000038005	LARP1	96	81.186	Rhinopithecus_bieti
ENSPCIG00000019242	LARP1	78	89.971	ENSRROG00000034073	LARP1	99	82.604	Rhinopithecus_roxellana
ENSPCIG00000019242	LARP1	76	88.543	ENSSBOG00000019816	LARP1	99	81.413	Saimiri_boliviensis_boliviensis
ENSPCIG00000019242	LARP1	80	95.610	ENSSHAG00000011115	LARP1	99	95.610	Sarcophilus_harrisii
ENSPCIG00000019242	LARP1	79	70.662	ENSSFOG00015020304	larp1	93	69.462	Scleropages_formosus
ENSPCIG00000019242	LARP1	90	65.173	ENSSFOG00015018058	-	98	66.006	Scleropages_formosus
ENSPCIG00000019242	LARP1	87	65.490	ENSSMAG00000007468	larp1	98	66.992	Scophthalmus_maximus
ENSPCIG00000019242	LARP1	89	65.732	ENSSDUG00000000268	larp1	97	71.256	Seriola_dumerili
ENSPCIG00000019242	LARP1	71	73.223	ENSSLDG00000016505	larp1	97	71.377	Seriola_lalandi_dorsalis
ENSPCIG00000019242	LARP1	51	90.726	ENSSARG00000013907	-	88	85.276	Sorex_araneus
ENSPCIG00000019242	LARP1	91	79.633	ENSSPUG00000012179	-	98	79.577	Sphenodon_punctatus
ENSPCIG00000019242	LARP1	89	66.883	ENSSPAG00000003910	larp1	97	67.069	Stegastes_partitus
ENSPCIG00000019242	LARP1	90	79.722	ENSSSCG00000017069	LARP1	97	84.271	Sus_scrofa
ENSPCIG00000019242	LARP1	76	88.210	ENSTGUG00000000704	LARP1	99	86.214	Taeniopygia_guttata
ENSPCIG00000019242	LARP1	89	65.370	ENSTRUG00000009470	larp1	96	64.689	Takifugu_rubripes
ENSPCIG00000019242	LARP1	73	87.798	ENSTBEG00000003381	LARP1	100	83.747	Tupaia_belangeri
ENSPCIG00000019242	LARP1	77	86.721	ENSTTRG00000015934	LARP1	99	82.878	Tursiops_truncatus
ENSPCIG00000019242	LARP1	89	89.392	ENSUAMG00000019334	LARP1	99	78.437	Ursus_americanus
ENSPCIG00000019242	LARP1	77	82.680	ENSUMAG00000002934	LARP1	96	85.322	Ursus_maritimus
ENSPCIG00000019242	LARP1	69	90.936	ENSVVUG00000004644	LARP1	99	82.774	Vulpes_vulpes
ENSPCIG00000019242	LARP1	82	78.328	ENSXETG00000008413	larp1	92	79.097	Xenopus_tropicalis
ENSPCIG00000019242	LARP1	79	75.926	ENSXCOG00000004022	larp1	93	76.034	Xiphophorus_couchianus
ENSPCIG00000019242	LARP1	89	64.711	ENSXMAG00000018780	larp1	96	64.351	Xiphophorus_maculatus