EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000019298 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 109066 bases
Position: chrFUWB01003499.1:13303-122368
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000025681	RRM_1	PF00076.22	2.2e-11	1	1
ENSPCIP00000025683	RRM_1	PF00076.22	2.6e-11	1	1
ENSPCIP00000025678	RRM_1	PF00076.22	3.3e-11	1	1
ENSPCIP00000025684	RRM_1	PF00076.22	3.3e-11	1	1
ENSPCIP00000025676	RRM_1	PF00076.22	4.3e-11	1	1
ENSPCIP00000025675	RRM_1	PF00076.22	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000031616	-	1019	-	ENSPCIP00000025683	261 (aa)	-	-
ENSPCIT00000031612	-	714	-	ENSPCIP00000025681	237 (aa)	-	-
ENSPCIT00000031606	-	1107	-	ENSPCIP00000025675	368 (aa)	-	-
ENSPCIT00000031607	-	1083	-	ENSPCIP00000025676	360 (aa)	-	-
ENSPCIT00000031609	-	931	-	ENSPCIP00000025678	307 (aa)	-	-
ENSPCIT00000031618	-	973	-	ENSPCIP00000025684	305 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000019298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000019298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000019298	-	59	80.142	ENSPCIG00000029447	RBPMS2	89	78.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000019298	-	68	95.000	ENSG00000157110	RBPMS	97	95.455	Homo_sapiens
ENSPCIG00000019298	-	71	83.041	ENSAPOG00000022304	RBPMS	92	85.556	Acanthochromis_polyacanthus
ENSPCIG00000019298	-	66	95.513	ENSAMEG00000001522	RBPMS	89	80.000	Ailuropoda_melanoleuca
ENSPCIG00000019298	-	71	83.041	ENSAOCG00000007731	RBPMS	92	85.556	Amphiprion_ocellaris
ENSPCIG00000019298	-	71	83.041	ENSAPEG00000023543	RBPMS	92	85.556	Amphiprion_percula
ENSPCIG00000019298	-	71	83.041	ENSATEG00000018184	RBPMS	90	86.932	Anabas_testudineus
ENSPCIG00000019298	-	71	87.791	ENSACAG00000003012	RBPMS	93	93.407	Anolis_carolinensis
ENSPCIG00000019298	-	68	95.000	ENSANAG00000028150	RBPMS	90	96.591	Aotus_nancymaae
ENSPCIG00000019298	-	71	83.041	ENSACLG00000002926	RBPMS	90	86.932	Astatotilapia_calliptera
ENSPCIG00000019298	-	65	86.452	ENSAMXG00000033491	rbpms	93	84.444	Astyanax_mexicanus
ENSPCIG00000019298	-	65	95.484	ENSBTAG00000033727	RBPMS	89	79.397	Bos_taurus
ENSPCIG00000019298	-	68	95.000	ENSCJAG00000012366	RBPMS	90	96.591	Callithrix_jacchus
ENSPCIG00000019298	-	81	79.899	ENSCAFG00000006503	RBPMS	89	79.899	Canis_familiaris
ENSPCIG00000019298	-	81	79.899	ENSCAFG00020001031	RBPMS	89	79.899	Canis_lupus_dingo
ENSPCIG00000019298	-	71	80.814	ENSCHIG00000027156	RBPMS	90	88.136	Capra_hircus
ENSPCIG00000019298	-	81	79.899	ENSCPOG00000038597	RBPMS	90	96.591	Cavia_porcellus
ENSPCIG00000019298	-	68	95.000	ENSCCAG00000033226	RBPMS	90	96.591	Cebus_capucinus
ENSPCIG00000019298	-	68	95.000	ENSCATG00000036486	RBPMS	90	96.591	Cercocebus_atys
ENSPCIG00000019298	-	65	96.753	ENSCLAG00000001518	RBPMS	100	97.126	Chinchilla_lanigera
ENSPCIG00000019298	-	81	79.899	ENSCSAG00000015838	RBPMS	89	79.899	Chlorocebus_sabaeus
ENSPCIG00000019298	-	65	96.753	ENSCHOG00000008745	RBPMS	86	90.000	Choloepus_hoffmanni
ENSPCIG00000019298	-	71	88.889	ENSCPBG00000013437	RBPMS	94	92.350	Chrysemys_picta_bellii
ENSPCIG00000019298	-	68	95.000	ENSCANG00000034997	RBPMS	100	97.126	Colobus_angolensis_palliatus
ENSPCIG00000019298	-	81	79.500	ENSCGRG00001002814	Rbpms	90	96.045	Cricetulus_griseus_chok1gshd
ENSPCIG00000019298	-	65	96.129	ENSCGRG00000006095	Rbpms	100	96.571	Cricetulus_griseus_crigri
ENSPCIG00000019298	-	71	83.041	ENSCSEG00000002777	rbpms	96	87.429	Cynoglossus_semilaevis
ENSPCIG00000019298	-	71	83.041	ENSCVAG00000013975	RBPMS	92	85.556	Cyprinodon_variegatus
ENSPCIG00000019298	-	69	65.269	ENSDARG00000099396	rbpms	100	68.235	Danio_rerio
ENSPCIG00000019298	-	65	96.753	ENSDNOG00000008126	RBPMS	79	89.535	Dasypus_novemcinctus
ENSPCIG00000019298	-	65	95.455	ENSETEG00000017582	RBPMS	89	78.894	Echinops_telfairi
ENSPCIG00000019298	-	65	96.753	ENSEASG00005016962	RBPMS	98	79.899	Equus_asinus_asinus
ENSPCIG00000019298	-	65	96.753	ENSECAG00000020735	RBPMS	98	79.899	Equus_caballus
ENSPCIG00000019298	-	71	81.871	ENSELUG00000009787	rbpms	90	85.795	Esox_lucius
ENSPCIG00000019298	-	65	96.774	ENSFCAG00000025639	-	90	96.591	Felis_catus
ENSPCIG00000019298	-	65	56.129	ENSFCAG00000022292	-	86	52.809	Felis_catus
ENSPCIG00000019298	-	65	96.753	ENSFDAG00000012078	RBPMS	100	97.126	Fukomys_damarensis
ENSPCIG00000019298	-	71	83.041	ENSFHEG00000000618	rbpms	92	85.556	Fundulus_heteroclitus
ENSPCIG00000019298	-	54	55.814	ENSGMOG00000009646	-	97	53.061	Gadus_morhua
ENSPCIG00000019298	-	71	83.041	ENSGAFG00000016566	RBPMS	90	86.932	Gambusia_affinis
ENSPCIG00000019298	-	71	73.684	ENSGACG00000019471	rbpms	90	77.841	Gasterosteus_aculeatus
ENSPCIG00000019298	-	71	83.041	ENSHBUG00000005888	RBPMS	90	86.932	Haplochromis_burtoni
ENSPCIG00000019298	-	81	79.899	ENSHGLG00000002303	RBPMS	90	96.591	Heterocephalus_glaber_female
ENSPCIG00000019298	-	65	96.753	ENSHGLG00100008787	RBPMS	100	97.126	Heterocephalus_glaber_male
ENSPCIG00000019298	-	71	82.456	ENSHCOG00000005774	rbpms	93	85.000	Hippocampus_comes
ENSPCIG00000019298	-	65	83.871	ENSIPUG00000012459	RBPMS	93	82.222	Ictalurus_punctatus
ENSPCIG00000019298	-	81	79.899	ENSSTOG00000026546	RBPMS	90	96.591	Ictidomys_tridecemlineatus
ENSPCIG00000019298	-	65	96.104	ENSJJAG00000014024	Rbpms	90	96.023	Jaculus_jaculus
ENSPCIG00000019298	-	61	66.489	ENSKMAG00000006377	RBPMS	92	67.539	Kryptolebias_marmoratus
ENSPCIG00000019298	-	72	82.659	ENSLBEG00000027989	RBPMS	97	87.356	Labrus_bergylta
ENSPCIG00000019298	-	71	83.626	ENSLOCG00000013199	RBPMS	96	87.429	Lepisosteus_oculatus
ENSPCIG00000019298	-	81	79.899	ENSLAFG00000000209	RBPMS	89	79.899	Loxodonta_africana
ENSPCIG00000019298	-	68	95.000	ENSMFAG00000036911	RBPMS	90	96.591	Macaca_fascicularis
ENSPCIG00000019298	-	68	95.000	ENSMMUG00000000458	RBPMS	90	96.591	Macaca_mulatta
ENSPCIG00000019298	-	68	95.000	ENSMNEG00000043805	RBPMS	90	96.591	Macaca_nemestrina
ENSPCIG00000019298	-	68	95.000	ENSMLEG00000015635	RBPMS	100	97.126	Mandrillus_leucophaeus
ENSPCIG00000019298	-	53	67.683	ENSMAMG00000004604	RBPMS	68	79.845	Mastacembelus_armatus
ENSPCIG00000019298	-	71	83.041	ENSMZEG00005000698	RBPMS	97	86.857	Maylandia_zebra
ENSPCIG00000019298	-	72	86.705	ENSMGAG00000005088	RBPMS	90	93.714	Meleagris_gallopavo
ENSPCIG00000019298	-	81	79.500	ENSMAUG00000018892	Rbpms	90	96.045	Mesocricetus_auratus
ENSPCIG00000019298	-	65	96.104	ENSMICG00000001295	RBPMS	90	96.023	Microcebus_murinus
ENSPCIG00000019298	-	81	79.500	ENSMOCG00000014009	Rbpms	90	96.045	Microtus_ochrogaster
ENSPCIG00000019298	-	71	84.615	ENSMMOG00000012036	RBPMS	77	77.957	Mola_mola
ENSPCIG00000019298	-	71	90.058	ENSMODG00000019006	RBPMS	83	97.159	Monodelphis_domestica
ENSPCIG00000019298	-	71	82.456	ENSMALG00000003261	RBPMS	93	86.286	Monopterus_albus
ENSPCIG00000019298	-	81	79.500	MGP_CAROLIEiJ_G0030970	Rbpms	90	95.480	Mus_caroli
ENSPCIG00000019298	-	81	79.500	ENSMUSG00000031586	Rbpms	97	89.610	Mus_musculus
ENSPCIG00000019298	-	65	96.129	MGP_PahariEiJ_G0021439	Rbpms	90	95.480	Mus_pahari
ENSPCIG00000019298	-	81	79.500	MGP_SPRETEiJ_G0032087	Rbpms	90	95.480	Mus_spretus
ENSPCIG00000019298	-	66	95.513	ENSMPUG00000011314	RBPMS	89	80.000	Mustela_putorius_furo
ENSPCIG00000019298	-	71	89.474	ENSMLUG00000009391	RBPMS	99	87.821	Myotis_lucifugus
ENSPCIG00000019298	-	81	79.899	ENSNGAG00000011141	Rbpms	89	79.899	Nannospalax_galili
ENSPCIG00000019298	-	71	83.041	ENSNBRG00000003313	RBPMS	97	86.857	Neolamprologus_brichardi
ENSPCIG00000019298	-	68	95.000	ENSNLEG00000036183	-	90	96.591	Nomascus_leucogenys
ENSPCIG00000019298	-	81	79.899	ENSODEG00000006700	RBPMS	90	96.591	Octodon_degus
ENSPCIG00000019298	-	71	83.041	ENSONIG00000007546	RBPMS	100	86.857	Oreochromis_niloticus
ENSPCIG00000019298	-	65	96.753	ENSOCUG00000008572	RBPMS	79	89.535	Oryctolagus_cuniculus
ENSPCIG00000019298	-	71	82.456	ENSORLG00000004135	-	90	86.364	Oryzias_latipes
ENSPCIG00000019298	-	71	82.456	ENSORLG00020016179	RBPMS	90	86.364	Oryzias_latipes_hni
ENSPCIG00000019298	-	71	82.456	ENSORLG00015013770	RBPMS	90	86.364	Oryzias_latipes_hsok
ENSPCIG00000019298	-	71	83.041	ENSOMEG00000005044	RBPMS	99	81.250	Oryzias_melastigma
ENSPCIG00000019298	-	71	86.441	ENSOGAG00000030298	RBPMS	80	86.034	Otolemur_garnettii
ENSPCIG00000019298	-	50	86.260	ENSOARG00000010366	RBPMS	92	86.260	Ovis_aries
ENSPCIG00000019298	-	68	95.000	ENSPPAG00000033108	RBPMS	100	97.126	Pan_paniscus
ENSPCIG00000019298	-	65	96.774	ENSPPRG00000004836	RBPMS	90	96.591	Panthera_pardus
ENSPCIG00000019298	-	65	96.753	ENSPTIG00000015964	RBPMS	89	97.126	Panthera_tigris_altaica
ENSPCIG00000019298	-	68	95.000	ENSPTRG00000020135	RBPMS	90	96.591	Pan_troglodytes
ENSPCIG00000019298	-	68	95.000	ENSPANG00000008143	RBPMS	90	96.591	Papio_anubis
ENSPCIG00000019298	-	71	80.702	ENSPKIG00000000535	-	93	84.571	Paramormyrops_kingsleyae
ENSPCIG00000019298	-	71	80.702	ENSPKIG00000004836	rbpms	95	81.667	Paramormyrops_kingsleyae
ENSPCIG00000019298	-	72	87.283	ENSPSIG00000006136	RBPMS	99	93.678	Pelodiscus_sinensis
ENSPCIG00000019298	-	68	86.250	ENSPMGG00000018012	RBPMS	81	82.184	Periophthalmus_magnuspinnatus
ENSPCIG00000019298	-	65	89.103	ENSPEMG00000021130	Rbpms	90	94.944	Peromyscus_maniculatus_bairdii
ENSPCIG00000019298	-	71	83.041	ENSPFOG00000017158	RBPMS	90	86.932	Poecilia_formosa
ENSPCIG00000019298	-	71	83.041	ENSPLAG00000010767	RBPMS	90	86.932	Poecilia_latipinna
ENSPCIG00000019298	-	71	83.041	ENSPMEG00000009788	RBPMS	90	86.932	Poecilia_mexicana
ENSPCIG00000019298	-	71	83.041	ENSPREG00000016959	RBPMS	90	86.932	Poecilia_reticulata
ENSPCIG00000019298	-	65	96.460	ENSPPYG00000018487	RBPMS	88	95.652	Pongo_abelii
ENSPCIG00000019298	-	55	93.846	ENSPCOG00000015948	RBPMS	81	89.286	Propithecus_coquereli
ENSPCIG00000019298	-	81	79.899	ENSPVAG00000001661	RBPMS	89	81.818	Pteropus_vampyrus
ENSPCIG00000019298	-	71	83.041	ENSPNYG00000001172	RBPMS	97	86.857	Pundamilia_nyererei
ENSPCIG00000019298	-	65	87.097	ENSPNAG00000029160	RBPMS	93	84.444	Pygocentrus_nattereri
ENSPCIG00000019298	-	81	79.500	ENSRNOG00000013328	Rbpms	77	95.597	Rattus_norvegicus
ENSPCIG00000019298	-	68	95.000	ENSRBIG00000038218	RBPMS	100	97.126	Rhinopithecus_bieti
ENSPCIG00000019298	-	68	95.000	ENSRROG00000042518	RBPMS	90	96.591	Rhinopithecus_roxellana
ENSPCIG00000019298	-	68	93.210	ENSSBOG00000026670	RBPMS	90	96.023	Saimiri_boliviensis_boliviensis
ENSPCIG00000019298	-	71	91.228	ENSSHAG00000010114	RBPMS	90	98.857	Sarcophilus_harrisii
ENSPCIG00000019298	-	71	80.117	ENSSFOG00015017481	-	96	81.967	Scleropages_formosus
ENSPCIG00000019298	-	65	87.742	ENSSFOG00015000417	rbpms	92	85.000	Scleropages_formosus
ENSPCIG00000019298	-	71	83.041	ENSSMAG00000010871	rbpms	92	85.556	Scophthalmus_maximus
ENSPCIG00000019298	-	71	83.041	ENSSDUG00000010894	RBPMS	91	86.857	Seriola_dumerili
ENSPCIG00000019298	-	71	83.041	ENSSLDG00000012916	RBPMS	90	86.932	Seriola_lalandi_dorsalis
ENSPCIG00000019298	-	65	92.857	ENSSARG00000000274	RBPMS	89	78.462	Sorex_araneus
ENSPCIG00000019298	-	65	94.194	ENSSPUG00000017525	RBPMS	68	93.785	Sphenodon_punctatus
ENSPCIG00000019298	-	57	68.391	ENSSPAG00000004777	rbpms	73	86.555	Stegastes_partitus
ENSPCIG00000019298	-	81	79.899	ENSSSCG00000015846	RBPMS	90	96.591	Sus_scrofa
ENSPCIG00000019298	-	71	88.304	ENSTGUG00000001776	RBPMS	93	94.886	Taeniopygia_guttata
ENSPCIG00000019298	-	71	82.456	ENSTRUG00000000041	RBPMS	92	85.000	Takifugu_rubripes
ENSPCIG00000019298	-	65	95.455	ENSTTRG00000012451	RBPMS	84	83.333	Tursiops_truncatus
ENSPCIG00000019298	-	68	93.827	ENSUMAG00000007347	RBPMS	96	81.466	Ursus_maritimus
ENSPCIG00000019298	-	65	96.753	ENSVPAG00000010991	RBPMS	98	79.899	Vicugna_pacos
ENSPCIG00000019298	-	81	79.899	ENSVVUG00000019770	RBPMS	90	96.591	Vulpes_vulpes
ENSPCIG00000019298	-	77	81.319	ENSXETG00000011290	rbpms	100	90.805	Xenopus_tropicalis
ENSPCIG00000019298	-	72	75.723	ENSXCOG00000002436	RBPMS	90	80.571	Xiphophorus_couchianus
ENSPCIG00000019298	-	71	83.041	ENSXMAG00000027637	RBPMS	90	86.932	Xiphophorus_maculatus