EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000019333 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 6504 bases
Position: chrFUWB01001194.1:32671-39174
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000025754	zf-C2H2	PF00096.26	1e-40	1	7
ENSPCIP00000025754	zf-C2H2	PF00096.26	1e-40	2	7
ENSPCIP00000025754	zf-C2H2	PF00096.26	1e-40	3	7
ENSPCIP00000025754	zf-C2H2	PF00096.26	1e-40	4	7
ENSPCIP00000025754	zf-C2H2	PF00096.26	1e-40	5	7
ENSPCIP00000025754	zf-C2H2	PF00096.26	1e-40	6	7
ENSPCIP00000025754	zf-C2H2	PF00096.26	1e-40	7	7
ENSPCIP00000025756	zf-C2H2	PF00096.26	1.3e-31	1	5
ENSPCIP00000025756	zf-C2H2	PF00096.26	1.3e-31	2	5
ENSPCIP00000025756	zf-C2H2	PF00096.26	1.3e-31	3	5
ENSPCIP00000025756	zf-C2H2	PF00096.26	1.3e-31	4	5
ENSPCIP00000025756	zf-C2H2	PF00096.26	1.3e-31	5	5
ENSPCIP00000025757	zf-C2H2	PF00096.26	2.8e-20	1	4
ENSPCIP00000025757	zf-C2H2	PF00096.26	2.8e-20	2	4
ENSPCIP00000025757	zf-C2H2	PF00096.26	2.8e-20	3	4
ENSPCIP00000025757	zf-C2H2	PF00096.26	2.8e-20	4	4
ENSPCIP00000025756	zf-met	PF12874.7	6e-07	1	2
ENSPCIP00000025756	zf-met	PF12874.7	6e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000031697	-	687	-	ENSPCIP00000025754	228 (aa)	-	-
ENSPCIT00000031700	-	666	-	ENSPCIP00000025757	221 (aa)	-	-
ENSPCIT00000031699	-	546	-	ENSPCIP00000025756	181 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000019333's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000019333's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000019333	-	88	61.053	ENSPCIG00000016845	-	86	61.053
ENSPCIG00000019333	-	87	52.318	ENSPCIG00000018902	-	83	52.222
ENSPCIG00000019333	-	91	53.403	ENSPCIG00000013076	ZNF628	57	53.403
ENSPCIG00000019333	-	87	48.630	ENSPCIG00000022999	-	99	50.292
ENSPCIG00000019333	-	95	54.082	ENSPCIG00000022058	-	89	54.082
ENSPCIG00000019333	-	85	56.129	ENSPCIG00000023004	-	72	51.579
ENSPCIG00000019333	-	90	51.299	ENSPCIG00000023001	-	70	54.268
ENSPCIG00000019333	-	86	57.895	ENSPCIG00000010622	-	75	55.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000019333	-	86	56.643	ENSACIG00000017013	-	52	56.643	Amphilophus_citrinellus
ENSPCIG00000019333	-	96	56.410	ENSAMXG00000035683	-	94	56.410	Astyanax_mexicanus
ENSPCIG00000019333	-	96	55.714	ENSCPBG00000002063	-	63	55.714	Chrysemys_picta_bellii
ENSPCIG00000019333	-	93	55.319	ENSGAGG00000005331	-	80	55.319	Gopherus_agassizii
ENSPCIG00000019333	-	94	50.345	ENSGAGG00000017640	-	60	53.543	Gopherus_agassizii
ENSPCIG00000019333	-	88	50.314	ENSHCOG00000014786	-	95	48.322	Hippocampus_comes
ENSPCIG00000019333	-	87	48.387	ENSHCOG00000001292	-	71	46.951	Hippocampus_comes
ENSPCIG00000019333	-	88	54.450	ENSIPUG00000015601	-	50	54.450	Ictalurus_punctatus
ENSPCIG00000019333	-	90	53.529	ENSIPUG00000015203	-	50	53.529	Ictalurus_punctatus
ENSPCIG00000019333	-	99	52.113	ENSORLG00020001707	-	75	52.113	Oryzias_latipes_hni
ENSPCIG00000019333	-	95	53.299	ENSPFOG00000024567	-	99	53.299	Poecilia_formosa
ENSPCIG00000019333	-	94	57.143	ENSPFOG00000011209	-	51	48.765	Poecilia_formosa
ENSPCIG00000019333	-	87	47.368	ENSPMEG00000016762	-	86	47.368	Poecilia_mexicana
ENSPCIG00000019333	-	86	56.287	ENSPNAG00000008491	-	73	56.287	Pygocentrus_nattereri
ENSPCIG00000019333	-	88	54.857	ENSPNAG00000018409	-	86	54.857	Pygocentrus_nattereri
ENSPCIG00000019333	-	88	52.229	ENSPNAG00000009741	-	60	52.229	Pygocentrus_nattereri