EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000020151 (Gene tree)
Gene ID: 110195687
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 50268 bases
Position: chrFUWB01000548.1:47517-97784
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000027055	ResIII	PF04851.15	2.6e-11	1	1
ENSPCIP00000027051	ResIII	PF04851.15	2.7e-11	1	1
ENSPCIP00000027056	ResIII	PF04851.15	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000033282	-	2511	-	ENSPCIP00000027051	836 (aa)	-	-
ENSPCIT00000033286	-	2598	-	ENSPCIP00000027055	865 (aa)	-	-
ENSPCIT00000033287	-	2580	-	ENSPCIP00000027056	859 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000020151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000020151's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000020151	-	68	30.303	ENSPCIG00000020095	-	51	30.303
ENSPCIG00000020151	-	76	43.951	ENSPCIG00000029032	RAD54L	85	43.951
ENSPCIG00000020151	-	58	32.448	ENSPCIG00000008137	SMARCAD1	67	32.638
ENSPCIG00000020151	-	56	32.716	ENSPCIG00000030409	CHD1L	51	33.128

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000020151	-	94	78.175	ENSG00000197275	RAD54B	89	78.175	Homo_sapiens
ENSPCIG00000020151	-	85	79.890	ENSG00000265817	FSBP	100	80.441	Homo_sapiens
ENSPCIG00000020151	-	94	77.625	ENSAMEG00000005834	-	89	77.160	Ailuropoda_melanoleuca
ENSPCIG00000020151	-	92	59.039	ENSACIG00000013005	rad54b	89	59.166	Amphilophus_citrinellus
ENSPCIG00000020151	-	92	58.846	ENSAOCG00000008523	rad54b	85	59.222	Amphiprion_ocellaris
ENSPCIG00000020151	-	92	59.155	ENSAPEG00000001673	rad54b	89	59.155	Amphiprion_percula
ENSPCIG00000020151	-	94	57.143	ENSATEG00000001527	rad54b	94	57.369	Anabas_testudineus
ENSPCIG00000020151	-	94	74.289	ENSAPLG00000014366	-	87	75.561	Anas_platyrhynchos
ENSPCIG00000020151	-	92	72.010	ENSACAG00000003671	-	98	72.392	Anolis_carolinensis
ENSPCIG00000020151	-	76	79.784	ENSANAG00000019528	-	100	80.277	Aotus_nancymaae
ENSPCIG00000020151	-	92	58.786	ENSACLG00000007826	rad54b	92	58.890	Astatotilapia_calliptera
ENSPCIG00000020151	-	91	58.883	ENSAMXG00000039985	rad54b	94	58.690	Astyanax_mexicanus
ENSPCIG00000020151	-	94	77.029	ENSBTAG00000000632	RAD54B	89	76.952	Bos_taurus
ENSPCIG00000020151	-	86	35.931	WBGene00013792	Y116A8C.13	98	32.914	Caenorhabditis_elegans
ENSPCIG00000020151	-	94	76.770	ENSCJAG00000000080	-	100	79.063	Callithrix_jacchus
ENSPCIG00000020151	-	94	77.000	ENSCAFG00000009179	RAD54B	88	77.625	Canis_familiaris
ENSPCIG00000020151	-	94	77.125	ENSCAFG00020012084	-	88	77.750	Canis_lupus_dingo
ENSPCIG00000020151	-	94	77.653	ENSCHIG00000008230	-	89	77.571	Capra_hircus
ENSPCIG00000020151	-	94	78.027	ENSTSYG00000013234	-	89	77.998	Carlito_syrichta
ENSPCIG00000020151	-	94	75.871	ENSCPOG00000011643	-	89	76.566	Cavia_porcellus
ENSPCIG00000020151	-	94	77.403	ENSCCAG00000011754	-	100	79.448	Cebus_capucinus
ENSPCIG00000020151	-	94	77.543	ENSCATG00000030661	-	100	79.890	Cercocebus_atys
ENSPCIG00000020151	-	94	77.210	ENSCLAG00000010476	-	91	77.571	Chinchilla_lanigera
ENSPCIG00000020151	-	94	77.805	ENSCSAG00000012712	-	89	77.805	Chlorocebus_sabaeus
ENSPCIG00000020151	-	94	74.572	ENSCPBG00000003204	-	89	74.572	Chrysemys_picta_bellii
ENSPCIG00000020151	-	94	77.805	ENSCANG00000017939	-	100	79.890	Colobus_angolensis_palliatus
ENSPCIG00000020151	-	94	75.218	ENSCGRG00001020184	Rad54b	92	75.000	Cricetulus_griseus_chok1gshd
ENSPCIG00000020151	-	94	74.222	ENSCGRG00000016752	Rad54b	91	73.978	Cricetulus_griseus_crigri
ENSPCIG00000020151	-	94	58.292	ENSCSEG00000001601	rad54b	94	58.647	Cynoglossus_semilaevis
ENSPCIG00000020151	-	92	61.323	ENSCVAG00000009200	rad54b	89	61.323	Cyprinodon_variegatus
ENSPCIG00000020151	-	95	58.303	ENSDARG00000092134	rad54b	99	62.597	Danio_rerio
ENSPCIG00000020151	-	94	76.303	ENSDNOG00000015535	-	89	76.108	Dasypus_novemcinctus
ENSPCIG00000020151	-	94	76.375	ENSDORG00000002492	Rad54b	91	77.146	Dipodomys_ordii
ENSPCIG00000020151	-	86	75.342	ENSETEG00000010605	-	87	78.624	Echinops_telfairi
ENSPCIG00000020151	-	92	50.508	ENSEBUG00000009104	rad54b	84	50.508	Eptatretus_burgeri
ENSPCIG00000020151	-	94	76.309	ENSEASG00005004021	-	91	76.332	Equus_asinus_asinus
ENSPCIG00000020151	-	94	76.683	ENSECAG00000021949	-	94	76.961	Equus_caballus
ENSPCIG00000020151	-	75	77.500	ENSEEUG00000008056	-	72	77.500	Erinaceus_europaeus
ENSPCIG00000020151	-	91	59.288	ENSELUG00000009287	rad54b	84	59.669	Esox_lucius
ENSPCIG00000020151	-	94	77.778	ENSFCAG00000015513	-	99	80.000	Felis_catus
ENSPCIG00000020151	-	94	73.599	ENSFALG00000005467	-	90	72.530	Ficedula_albicollis
ENSPCIG00000020151	-	94	77.239	ENSFDAG00000020541	-	89	77.640	Fukomys_damarensis
ENSPCIG00000020151	-	92	58.720	ENSFHEG00000014382	rad54b	87	58.926	Fundulus_heteroclitus
ENSPCIG00000020151	-	92	56.892	ENSGMOG00000014774	rad54b	98	57.196	Gadus_morhua
ENSPCIG00000020151	-	94	73.234	ENSGALG00000043597	RAD54B	87	73.940	Gallus_gallus
ENSPCIG00000020151	-	92	60.051	ENSGAFG00000007901	rad54b	92	60.051	Gambusia_affinis
ENSPCIG00000020151	-	93	57.940	ENSGACG00000009128	rad54b	87	58.189	Gasterosteus_aculeatus
ENSPCIG00000020151	-	94	74.785	ENSGAGG00000018747	-	88	74.785	Gopherus_agassizii
ENSPCIG00000020151	-	94	78.137	ENSGGOG00000023516	-	89	78.245	Gorilla_gorilla
ENSPCIG00000020151	-	92	58.564	ENSHBUG00000016017	rad54b	84	58.816	Haplochromis_burtoni
ENSPCIG00000020151	-	94	75.432	ENSHGLG00000008263	RAD54B	88	75.460	Heterocephalus_glaber_female
ENSPCIG00000020151	-	94	74.510	ENSHGLG00100008108	-	88	74.543	Heterocephalus_glaber_male
ENSPCIG00000020151	-	92	58.629	ENSHCOG00000004764	rad54b	99	56.597	Hippocampus_comes
ENSPCIG00000020151	-	92	58.595	ENSIPUG00000018531	rad54b	84	58.772	Ictalurus_punctatus
ENSPCIG00000020151	-	94	76.625	ENSSTOG00000010791	-	88	76.971	Ictidomys_tridecemlineatus
ENSPCIG00000020151	-	94	76.866	ENSJJAG00000010314	Rad54b	89	77.009	Jaculus_jaculus
ENSPCIG00000020151	-	93	59.189	ENSKMAG00000004744	rad54b	93	59.189	Kryptolebias_marmoratus
ENSPCIG00000020151	-	87	70.067	ENSLACG00000000859	-	100	70.201	Latimeria_chalumnae
ENSPCIG00000020151	-	92	63.671	ENSLOCG00000010100	rad54b	93	63.970	Lepisosteus_oculatus
ENSPCIG00000020151	-	94	75.373	ENSLAFG00000015315	-	99	76.035	Loxodonta_africana
ENSPCIG00000020151	-	94	77.805	ENSMFAG00000031629	-	100	80.028	Macaca_fascicularis
ENSPCIG00000020151	-	94	77.805	ENSMMUG00000005659	-	89	77.805	Macaca_mulatta
ENSPCIG00000020151	-	94	77.682	ENSMNEG00000016408	-	89	77.682	Macaca_nemestrina
ENSPCIG00000020151	-	94	77.805	ENSMLEG00000006946	-	89	77.805	Mandrillus_leucophaeus
ENSPCIG00000020151	-	91	60.330	ENSMAMG00000012269	rad54b	89	60.330	Mastacembelus_armatus
ENSPCIG00000020151	-	92	58.786	ENSMZEG00005005281	rad54b	95	58.890	Maylandia_zebra
ENSPCIG00000020151	-	94	73.234	ENSMGAG00000012024	-	87	73.940	Meleagris_gallopavo
ENSPCIG00000020151	-	94	74.442	ENSMAUG00000013586	Rad54b	90	75.503	Mesocricetus_auratus
ENSPCIG00000020151	-	94	78.234	ENSMICG00000000754	-	93	78.121	Microcebus_murinus
ENSPCIG00000020151	-	94	74.657	ENSMOCG00000020035	Rad54b	91	74.536	Microtus_ochrogaster
ENSPCIG00000020151	-	91	58.726	ENSMMOG00000003394	rad54b	89	59.004	Mola_mola
ENSPCIG00000020151	-	94	87.811	ENSMODG00000007343	-	99	88.778	Monodelphis_domestica
ENSPCIG00000020151	-	75	61.295	ENSMALG00000001520	rad54b	99	61.295	Monopterus_albus
ENSPCIG00000020151	-	94	76.030	MGP_CAROLIEiJ_G0025810	Rad54b	90	76.185	Mus_caroli
ENSPCIG00000020151	-	94	75.531	ENSMUSG00000078773	Rad54b	90	75.686	Mus_musculus
ENSPCIG00000020151	-	94	75.156	MGP_PahariEiJ_G0023933	Rad54b	90	75.312	Mus_pahari
ENSPCIG00000020151	-	94	76.280	MGP_SPRETEiJ_G0026758	Rad54b	90	76.559	Mus_spretus
ENSPCIG00000020151	-	93	77.233	ENSMPUG00000008878	-	98	77.610	Mustela_putorius_furo
ENSPCIG00000020151	-	95	76.856	ENSMLUG00000008953	-	89	77.340	Myotis_lucifugus
ENSPCIG00000020151	-	95	76.386	ENSNGAG00000017537	Rad54b	92	76.386	Nannospalax_galili
ENSPCIG00000020151	-	92	59.039	ENSNBRG00000013394	rad54b	92	59.166	Neolamprologus_brichardi
ENSPCIG00000020151	-	94	78.040	ENSNLEG00000003062	-	99	80.303	Nomascus_leucogenys
ENSPCIG00000020151	-	76	89.578	ENSMEUG00000012426	-	72	89.526	Notamacropus_eugenii
ENSPCIG00000020151	-	94	75.965	ENSODEG00000019564	-	89	76.750	Octodon_degus
ENSPCIG00000020151	-	94	71.820	ENSODEG00000002650	-	95	78.769	Octodon_degus
ENSPCIG00000020151	-	93	57.966	ENSONIG00000006067	rad54b	89	57.966	Oreochromis_niloticus
ENSPCIG00000020151	-	88	77.763	ENSOANG00000011348	-	99	78.562	Ornithorhynchus_anatinus
ENSPCIG00000020151	-	94	77.722	ENSOCUG00000016478	-	88	78.223	Oryctolagus_cuniculus
ENSPCIG00000020151	-	91	60.303	ENSORLG00000008918	rad54b	99	63.084	Oryzias_latipes
ENSPCIG00000020151	-	75	62.617	ENSORLG00020012171	rad54b	99	63.084	Oryzias_latipes_hni
ENSPCIG00000020151	-	91	60.354	ENSORLG00015018536	rad54b	84	60.606	Oryzias_latipes_hsok
ENSPCIG00000020151	-	89	59.948	ENSOMEG00000004345	rad54b	99	60.078	Oryzias_melastigma
ENSPCIG00000020151	-	94	77.612	ENSOGAG00000007854	-	88	77.764	Otolemur_garnettii
ENSPCIG00000020151	-	94	77.239	ENSOARG00000007691	-	99	77.419	Ovis_aries
ENSPCIG00000020151	-	94	76.551	ENSPPAG00000029572	-	89	76.449	Pan_paniscus
ENSPCIG00000020151	-	94	77.903	ENSPPRG00000007571	-	99	80.138	Panthera_pardus
ENSPCIG00000020151	-	85	79.724	ENSPTIG00000012670	-	99	80.414	Panthera_tigris_altaica
ENSPCIG00000020151	-	94	78.052	ENSPTRG00000020427	-	100	80.303	Pan_troglodytes
ENSPCIG00000020151	-	94	77.805	ENSPANG00000019566	-	89	77.805	Papio_anubis
ENSPCIG00000020151	-	91	61.646	ENSPKIG00000014974	rad54b	85	61.899	Paramormyrops_kingsleyae
ENSPCIG00000020151	-	97	70.540	ENSPSIG00000002383	-	99	72.738	Pelodiscus_sinensis
ENSPCIG00000020151	-	94	75.031	ENSPEMG00000012133	Rad54b	91	74.815	Peromyscus_maniculatus_bairdii
ENSPCIG00000020151	-	92	58.677	ENSPMAG00000002916	rad54b	99	59.051	Petromyzon_marinus
ENSPCIG00000020151	-	93	59.390	ENSPFOG00000023411	rad54b	87	59.174	Poecilia_formosa
ENSPCIG00000020151	-	93	59.634	ENSPLAG00000010430	rad54b	87	59.417	Poecilia_latipinna
ENSPCIG00000020151	-	94	59.164	ENSPMEG00000016873	rad54b	93	61.004	Poecilia_mexicana
ENSPCIG00000020151	-	93	59.268	ENSPREG00000018443	rad54b	93	58.557	Poecilia_reticulata
ENSPCIG00000020151	-	94	77.916	ENSPPYG00000018750	-	89	78.191	Pongo_abelii
ENSPCIG00000020151	-	94	77.736	ENSPCOG00000026845	-	99	79.834	Propithecus_coquereli
ENSPCIG00000020151	-	86	78.078	ENSPVAG00000000261	-	85	78.890	Pteropus_vampyrus
ENSPCIG00000020151	-	91	59.719	ENSPNYG00000018303	rad54b	95	59.770	Pundamilia_nyererei
ENSPCIG00000020151	-	92	59.339	ENSPNAG00000000295	rad54b	93	59.339	Pygocentrus_nattereri
ENSPCIG00000020151	-	94	73.010	ENSRNOG00000039949	Rad54b	90	73.350	Rattus_norvegicus
ENSPCIG00000020151	-	94	77.435	ENSRBIG00000020419	-	89	77.435	Rhinopithecus_bieti
ENSPCIG00000020151	-	94	77.435	ENSRROG00000039897	-	89	77.435	Rhinopithecus_roxellana
ENSPCIG00000020151	-	88	37.376	YBR073W	RDH54	81	37.376	Saccharomyces_cerevisiae
ENSPCIG00000020151	-	94	76.770	ENSSBOG00000028501	-	89	76.695	Saimiri_boliviensis_boliviensis
ENSPCIG00000020151	-	93	91.915	ENSSHAG00000017038	-	88	91.915	Sarcophilus_harrisii
ENSPCIG00000020151	-	68	66.257	ENSSFOG00015008483	rad54b	88	66.257	Scleropages_formosus
ENSPCIG00000020151	-	91	58.906	ENSSMAG00000018659	rad54b	93	57.811	Scophthalmus_maximus
ENSPCIG00000020151	-	91	59.236	ENSSDUG00000001122	rad54b	82	59.745	Seriola_dumerili
ENSPCIG00000020151	-	91	59.114	ENSSLDG00000013787	rad54b	91	56.122	Seriola_lalandi_dorsalis
ENSPCIG00000020151	-	97	71.260	ENSSPUG00000016497	-	95	71.260	Sphenodon_punctatus
ENSPCIG00000020151	-	92	59.068	ENSSPAG00000012800	rad54b	90	59.446	Stegastes_partitus
ENSPCIG00000020151	-	95	77.447	ENSSSCG00000006101	-	99	78.321	Sus_scrofa
ENSPCIG00000020151	-	94	72.637	ENSTGUG00000011880	-	88	73.383	Taeniopygia_guttata
ENSPCIG00000020151	-	92	58.660	ENSTRUG00000010015	rad54b	84	59.091	Takifugu_rubripes
ENSPCIG00000020151	-	94	74.065	ENSTTRG00000006312	-	89	73.978	Tursiops_truncatus
ENSPCIG00000020151	-	94	77.375	ENSUMAG00000016401	-	89	76.914	Ursus_maritimus
ENSPCIG00000020151	-	94	77.625	ENSVPAG00000003157	-	89	77.667	Vicugna_pacos
ENSPCIG00000020151	-	93	60.125	ENSXETG00000025924	rad54b	99	60.500	Xenopus_tropicalis
ENSPCIG00000020151	-	92	59.548	ENSXMAG00000013141	rad54b	92	59.673	Xiphophorus_maculatus