EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000020225 (Gene tree)
Gene ID: 110198476
Gene Symbol: -
Alias: -
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 42059 bases
Position: chrFUWB01001203.1:348998-391056
Accession: 110198476
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000027040	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000033271	-	1928	-	ENSPCIP00000027040	216 (aa)	XP_020828433	UPI000A2865EB

Gene Model

Click here to download ENSPCIG00000020225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000020225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000020225	-	98	39.726	ENSPCIG00000028705	-	92	39.726
ENSPCIG00000020225	-	89	41.951	ENSPCIG00000020371	-	95	41.951
ENSPCIG00000020225	-	89	40.976	ENSPCIG00000018951	RAB25	93	40.976
ENSPCIG00000020225	-	77	42.442	ENSPCIG00000000237	RAB7A	83	42.442
ENSPCIG00000020225	-	75	32.515	ENSPCIG00000022594	NRAS	85	32.515
ENSPCIG00000020225	-	89	36.979	ENSPCIG00000029350	-	95	36.979
ENSPCIG00000020225	-	86	50.000	ENSPCIG00000021558	-	64	50.000
ENSPCIG00000020225	-	89	34.848	ENSPCIG00000020415	RAB9B	97	34.848
ENSPCIG00000020225	-	55	31.148	ENSPCIG00000004915	ARL8A	62	31.148
ENSPCIG00000020225	-	77	46.386	ENSPCIG00000006878	RAB11A	75	46.386
ENSPCIG00000020225	-	68	35.570	ENSPCIG00000010893	RAB36	71	36.486
ENSPCIG00000020225	-	71	34.641	ENSPCIG00000012436	-	61	34.641
ENSPCIG00000020225	-	73	30.061	ENSPCIG00000025239	DNAJC27	60	30.061
ENSPCIG00000020225	-	89	34.872	ENSPCIG00000017722	RAB3D	89	34.872
ENSPCIG00000020225	-	94	38.835	ENSPCIG00000004450	-	93	38.835
ENSPCIG00000020225	-	98	34.978	ENSPCIG00000015312	RAB33A	92	34.978
ENSPCIG00000020225	-	83	42.778	ENSPCIG00000021943	RAB2B	97	41.237
ENSPCIG00000020225	-	83	40.000	ENSPCIG00000027547	RAB30	85	40.000
ENSPCIG00000020225	-	70	45.395	ENSPCIG00000000024	-	65	45.395
ENSPCIG00000020225	-	100	88.426	ENSPCIG00000018321	RAB5A	100	88.426
ENSPCIG00000020225	-	76	42.683	ENSPCIG00000009235	RAB14	76	42.683
ENSPCIG00000020225	-	81	32.597	ENSPCIG00000008359	HRAS	94	32.597
ENSPCIG00000020225	-	67	34.483	ENSPCIG00000003392	RHEB	85	34.483
ENSPCIG00000020225	-	82	36.723	ENSPCIG00000028346	RAB15	83	36.723
ENSPCIG00000020225	-	94	40.887	ENSPCIG00000010292	-	98	40.887
ENSPCIG00000020225	-	74	35.294	ENSPCIG00000022399	-	77	35.294
ENSPCIG00000020225	-	75	32.919	ENSPCIG00000007267	RAB23	73	34.104
ENSPCIG00000020225	-	90	48.454	ENSPCIG00000004714	RAB22A	98	48.454
ENSPCIG00000020225	-	57	34.400	ENSPCIG00000014229	KRAS	78	31.387
ENSPCIG00000020225	-	93	38.164	ENSPCIG00000027078	RAB33B	91	38.164
ENSPCIG00000020225	-	55	31.967	ENSPCIG00000028258	ARL8B	62	31.967
ENSPCIG00000020225	-	75	36.585	ENSPCIG00000029333	RAB39B	77	36.585
ENSPCIG00000020225	-	89	43.590	ENSPCIG00000023212	RAB1A	95	43.590
ENSPCIG00000020225	-	89	44.330	ENSPCIG00000008407	RAB1B	96	44.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000020225	-	100	97.685	ENSG00000108774	RAB5C	100	99.194	Homo_sapiens
ENSPCIG00000020225	-	99	89.302	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSPCIG00000020225	-	100	97.222	ENSAMEG00000006003	RAB5C	100	97.222	Ailuropoda_melanoleuca
ENSPCIG00000020225	-	99	88.889	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSPCIG00000020225	-	99	89.352	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSPCIG00000020225	-	96	89.952	ENSAPEG00000017868	-	96	91.866	Amphiprion_percula
ENSPCIG00000020225	-	100	89.450	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSPCIG00000020225	-	94	98.039	ENSANAG00000025390	RAB5C	100	98.039	Aotus_nancymaae
ENSPCIG00000020225	-	99	87.963	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSPCIG00000020225	-	96	88.152	ENSACLG00000008615	-	99	87.215	Astatotilapia_calliptera
ENSPCIG00000020225	-	97	88.152	ENSAMXG00000037267	-	100	90.521	Astyanax_mexicanus
ENSPCIG00000020225	-	99	89.862	ENSAMXG00000043717	rab5c	99	90.826	Astyanax_mexicanus
ENSPCIG00000020225	-	100	97.222	ENSBTAG00000006982	RAB5C	100	97.222	Bos_taurus
ENSPCIG00000020225	-	99	74.419	WBGene00004268	rab-5	99	74.419	Caenorhabditis_elegans
ENSPCIG00000020225	-	100	97.685	ENSCAFG00000015629	RAB5C	100	97.685	Canis_familiaris
ENSPCIG00000020225	-	100	97.685	ENSCAFG00020013537	RAB5C	100	97.685	Canis_lupus_dingo
ENSPCIG00000020225	-	100	97.222	ENSCHIG00000012960	RAB5C	100	97.222	Capra_hircus
ENSPCIG00000020225	-	100	97.685	ENSTSYG00000030531	RAB5C	100	97.685	Carlito_syrichta
ENSPCIG00000020225	-	100	96.759	ENSCCAG00000025940	RAB5C	100	96.759	Cebus_capucinus
ENSPCIG00000020225	-	100	97.685	ENSCATG00000040873	RAB5C	100	97.685	Cercocebus_atys
ENSPCIG00000020225	-	100	96.296	ENSCLAG00000016650	RAB5C	100	96.296	Chinchilla_lanigera
ENSPCIG00000020225	-	82	98.876	ENSCHOG00000009886	RAB5C	100	98.876	Choloepus_hoffmanni
ENSPCIG00000020225	-	99	75.234	ENSCING00000003340	-	99	75.234	Ciona_intestinalis
ENSPCIG00000020225	-	99	74.545	ENSCSAVG00000000613	-	99	82.716	Ciona_savignyi
ENSPCIG00000020225	-	100	96.759	ENSCGRG00001014226	Rab5c	100	96.759	Cricetulus_griseus_chok1gshd
ENSPCIG00000020225	-	100	96.759	ENSCGRG00000007534	Rab5c	100	96.759	Cricetulus_griseus_crigri
ENSPCIG00000020225	-	99	89.815	ENSCSEG00000017024	rab5c	98	89.815	Cynoglossus_semilaevis
ENSPCIG00000020225	-	99	88.426	ENSCVAG00000009550	rab5c	98	89.815	Cyprinodon_variegatus
ENSPCIG00000020225	-	100	96.759	ENSDNOG00000038853	RAB5C	100	96.759	Dasypus_novemcinctus
ENSPCIG00000020225	-	100	96.759	ENSDORG00000006819	Rab5c	100	96.759	Dipodomys_ordii
ENSPCIG00000020225	-	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSPCIG00000020225	-	99	78.802	ENSEBUG00000014794	rab5c	100	78.802	Eptatretus_burgeri
ENSPCIG00000020225	-	100	97.222	ENSEASG00005009281	RAB5C	100	97.222	Equus_asinus_asinus
ENSPCIG00000020225	-	100	97.685	ENSECAG00000025054	RAB5C	100	97.685	Equus_caballus
ENSPCIG00000020225	-	100	97.222	ENSEEUG00000002790	RAB5C	100	97.222	Erinaceus_europaeus
ENSPCIG00000020225	-	99	87.963	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSPCIG00000020225	-	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSPCIG00000020225	-	100	97.222	ENSFCAG00000002148	RAB5C	100	97.222	Felis_catus
ENSPCIG00000020225	-	100	94.444	ENSFDAG00000021541	RAB5C	100	94.444	Fukomys_damarensis
ENSPCIG00000020225	-	99	89.352	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSPCIG00000020225	-	99	90.323	ENSFHEG00000015268	-	99	90.323	Fundulus_heteroclitus
ENSPCIG00000020225	-	99	87.963	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSPCIG00000020225	-	80	86.127	ENSGMOG00000001876	-	100	86.127	Gadus_morhua
ENSPCIG00000020225	-	96	89.952	ENSGAFG00000003642	-	99	86.425	Gambusia_affinis
ENSPCIG00000020225	-	99	89.815	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSPCIG00000020225	-	87	94.681	ENSGACG00000008659	rab5c	99	86.175	Gasterosteus_aculeatus
ENSPCIG00000020225	-	100	97.685	ENSGGOG00000005472	RAB5C	100	97.685	Gorilla_gorilla
ENSPCIG00000020225	-	99	87.963	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSPCIG00000020225	-	96	88.152	ENSHBUG00000006823	-	99	87.215	Haplochromis_burtoni
ENSPCIG00000020225	-	100	93.519	ENSHGLG00000012067	RAB5C	100	93.519	Heterocephalus_glaber_female
ENSPCIG00000020225	-	97	81.604	ENSHCOG00000020238	-	100	79.545	Hippocampus_comes
ENSPCIG00000020225	-	99	89.862	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSPCIG00000020225	-	97	88.152	ENSIPUG00000020082	rab5c	98	88.991	Ictalurus_punctatus
ENSPCIG00000020225	-	100	95.833	ENSSTOG00000006620	RAB5C	100	95.833	Ictidomys_tridecemlineatus
ENSPCIG00000020225	-	100	97.222	ENSJJAG00000021181	Rab5c	100	97.222	Jaculus_jaculus
ENSPCIG00000020225	-	99	87.558	ENSKMAG00000017417	-	99	87.558	Kryptolebias_marmoratus
ENSPCIG00000020225	-	99	88.889	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSPCIG00000020225	-	99	90.278	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSPCIG00000020225	-	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSPCIG00000020225	-	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSPCIG00000020225	-	100	97.685	ENSMFAG00000039627	RAB5C	100	97.685	Macaca_fascicularis
ENSPCIG00000020225	-	100	97.685	ENSMNEG00000000355	RAB5C	100	97.685	Macaca_nemestrina
ENSPCIG00000020225	-	99	88.889	ENSMAMG00000022322	rab5c	98	90.741	Mastacembelus_armatus
ENSPCIG00000020225	-	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSPCIG00000020225	-	99	87.963	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSPCIG00000020225	-	96	88.152	ENSMZEG00005021090	-	99	87.215	Maylandia_zebra
ENSPCIG00000020225	-	100	97.222	ENSMAUG00000015005	Rab5c	100	97.222	Mesocricetus_auratus
ENSPCIG00000020225	-	100	97.222	ENSMICG00000041608	RAB5C	100	97.222	Microcebus_murinus
ENSPCIG00000020225	-	100	97.222	ENSMOCG00000018531	-	100	97.222	Microtus_ochrogaster
ENSPCIG00000020225	-	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSPCIG00000020225	-	96	85.167	ENSMALG00000006052	rab5c	96	84.651	Monopterus_albus
ENSPCIG00000020225	-	99	86.239	ENSMALG00000022348	-	99	86.239	Monopterus_albus
ENSPCIG00000020225	-	100	96.759	MGP_CAROLIEiJ_G0017184	Rab5c	100	96.759	Mus_caroli
ENSPCIG00000020225	-	100	96.759	ENSMUSG00000019173	Rab5c	100	96.759	Mus_musculus
ENSPCIG00000020225	-	100	96.759	MGP_PahariEiJ_G0018314	Rab5c	100	96.759	Mus_pahari
ENSPCIG00000020225	-	100	96.759	MGP_SPRETEiJ_G0018027	Rab5c	100	96.759	Mus_spretus
ENSPCIG00000020225	-	100	97.222	ENSMPUG00000010554	RAB5C	100	97.222	Mustela_putorius_furo
ENSPCIG00000020225	-	100	97.222	ENSNGAG00000010286	Rab5c	100	97.222	Nannospalax_galili
ENSPCIG00000020225	-	96	88.152	ENSNBRG00000016922	-	99	87.215	Neolamprologus_brichardi
ENSPCIG00000020225	-	99	88.889	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSPCIG00000020225	-	82	91.573	ENSOPRG00000008255	RAB5C	100	91.573	Ochotona_princeps
ENSPCIG00000020225	-	100	95.370	ENSODEG00000017920	RAB5C	100	95.370	Octodon_degus
ENSPCIG00000020225	-	99	88.889	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSPCIG00000020225	-	100	88.073	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSPCIG00000020225	-	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSPCIG00000020225	-	100	88.073	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSPCIG00000020225	-	100	88.073	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSPCIG00000020225	-	100	97.222	ENSOGAG00000009456	RAB5C	100	97.222	Otolemur_garnettii
ENSPCIG00000020225	-	100	97.222	ENSOARG00000018768	RAB5C	100	97.222	Ovis_aries
ENSPCIG00000020225	-	100	97.685	ENSPPAG00000037206	RAB5C	100	97.685	Pan_paniscus
ENSPCIG00000020225	-	100	97.222	ENSPPRG00000005745	RAB5C	100	97.222	Panthera_pardus
ENSPCIG00000020225	-	100	97.222	ENSPTIG00000008177	RAB5C	100	97.222	Panthera_tigris_altaica
ENSPCIG00000020225	-	100	97.685	ENSPTRG00000009194	RAB5C	100	97.685	Pan_troglodytes
ENSPCIG00000020225	-	99	89.302	ENSPKIG00000001237	-	99	89.302	Paramormyrops_kingsleyae
ENSPCIG00000020225	-	99	86.111	ENSPKIG00000020112	-	99	86.111	Paramormyrops_kingsleyae
ENSPCIG00000020225	-	95	88.942	ENSPMGG00000010792	rab5c	96	90.865	Periophthalmus_magnuspinnatus
ENSPCIG00000020225	-	100	97.222	ENSPEMG00000017971	Rab5c	100	97.222	Peromyscus_maniculatus_bairdii
ENSPCIG00000020225	-	99	80.374	ENSPMAG00000007867	rab5c	99	80.374	Petromyzon_marinus
ENSPCIG00000020225	-	99	80.000	ENSPMAG00000001399	rab5c	100	80.000	Petromyzon_marinus
ENSPCIG00000020225	-	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSPCIG00000020225	-	99	88.479	ENSPLAG00000016333	-	99	88.479	Poecilia_latipinna
ENSPCIG00000020225	-	99	89.815	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSPCIG00000020225	-	98	87.324	ENSPMEG00000012614	-	99	86.425	Poecilia_mexicana
ENSPCIG00000020225	-	99	89.815	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSPCIG00000020225	-	99	89.815	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSPCIG00000020225	-	87	91.534	ENSPREG00000022167	-	89	92.896	Poecilia_reticulata
ENSPCIG00000020225	-	100	97.685	ENSPPYG00000008398	RAB5C	100	97.685	Pongo_abelii
ENSPCIG00000020225	-	100	96.296	ENSPCAG00000016412	RAB5C	100	96.296	Procavia_capensis
ENSPCIG00000020225	-	100	96.296	ENSPCOG00000026327	RAB5C	100	96.296	Propithecus_coquereli
ENSPCIG00000020225	-	100	97.685	ENSPVAG00000003867	RAB5C	100	97.685	Pteropus_vampyrus
ENSPCIG00000020225	-	96	88.152	ENSPNYG00000015851	-	99	87.215	Pundamilia_nyererei
ENSPCIG00000020225	-	99	87.963	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSPCIG00000020225	-	99	90.826	ENSPNAG00000028138	rab5c	99	90.826	Pygocentrus_nattereri
ENSPCIG00000020225	-	98	86.385	ENSPNAG00000002218	-	100	88.732	Pygocentrus_nattereri
ENSPCIG00000020225	-	100	97.222	ENSRNOG00000018568	Rab5c	100	97.222	Rattus_norvegicus
ENSPCIG00000020225	-	100	97.685	ENSRBIG00000031376	RAB5C	100	97.685	Rhinopithecus_bieti
ENSPCIG00000020225	-	100	97.685	ENSRROG00000032895	RAB5C	100	97.685	Rhinopithecus_roxellana
ENSPCIG00000020225	-	100	96.759	ENSSBOG00000032552	-	100	96.759	Saimiri_boliviensis_boliviensis
ENSPCIG00000020225	-	100	99.537	ENSSHAG00000005267	-	100	99.537	Sarcophilus_harrisii
ENSPCIG00000020225	-	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSPCIG00000020225	-	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSPCIG00000020225	-	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSPCIG00000020225	-	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSPCIG00000020225	-	100	96.296	ENSSPUG00000012950	-	100	96.296	Sphenodon_punctatus
ENSPCIG00000020225	-	99	89.815	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSPCIG00000020225	-	100	97.222	ENSSSCG00000032467	RAB5C	100	97.222	Sus_scrofa
ENSPCIG00000020225	-	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSPCIG00000020225	-	99	89.908	ENSTNIG00000011711	rab5c	99	89.908	Tetraodon_nigroviridis
ENSPCIG00000020225	-	100	98.148	ENSTBEG00000007092	RAB5C	100	98.148	Tupaia_belangeri
ENSPCIG00000020225	-	100	96.296	ENSTTRG00000006673	RAB5C	100	96.296	Tursiops_truncatus
ENSPCIG00000020225	-	100	97.222	ENSUAMG00000024343	RAB5C	100	97.222	Ursus_americanus
ENSPCIG00000020225	-	100	97.222	ENSUMAG00000023270	RAB5C	100	97.222	Ursus_maritimus
ENSPCIG00000020225	-	99	89.352	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSPCIG00000020225	-	96	90.431	ENSXCOG00000006300	-	99	86.486	Xiphophorus_couchianus
ENSPCIG00000020225	-	99	88.940	ENSXMAG00000022179	-	99	88.940	Xiphophorus_maculatus
ENSPCIG00000020225	-	99	89.815	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus