EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000020244 (Gene tree)
Gene ID: 110215727
Gene Symbol: LSM12
Alias: -
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 26817 bases
Position: chrFUWB01000054.1:524636-551452
Accession: 110215727
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000027070	AD	PF09793.9	3.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000033303	LSM12-201	766	-	ENSPCIP00000027070	195 (aa)	XP_020853098	UPI00005E9C2B

Gene Model

Click here to download ENSPCIG00000020244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000020244's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000020244	LSM12	100	96.923	ENSG00000161654	LSM12	100	96.923	Homo_sapiens
ENSPCIG00000020244	LSM12	100	86.224	ENSAPOG00000007907	lsm12b	100	86.224	Acanthochromis_polyacanthus
ENSPCIG00000020244	LSM12	100	94.949	ENSAMEG00000018321	LSM12	100	94.949	Ailuropoda_melanoleuca
ENSPCIG00000020244	LSM12	100	85.204	ENSACIG00000008538	lsm12b	100	85.204	Amphilophus_citrinellus
ENSPCIG00000020244	LSM12	100	85.714	ENSAOCG00000021847	lsm12b	88	85.714	Amphiprion_ocellaris
ENSPCIG00000020244	LSM12	100	85.714	ENSAPEG00000002252	lsm12b	100	85.714	Amphiprion_percula
ENSPCIG00000020244	LSM12	100	85.204	ENSATEG00000005705	lsm12b	100	85.204	Anabas_testudineus
ENSPCIG00000020244	LSM12	99	94.301	ENSACAG00000004618	LSM12	99	94.301	Anolis_carolinensis
ENSPCIG00000020244	LSM12	100	96.923	ENSANAG00000029011	LSM12	100	96.923	Aotus_nancymaae
ENSPCIG00000020244	LSM12	100	84.694	ENSACLG00000026332	lsm12b	100	84.694	Astatotilapia_calliptera
ENSPCIG00000020244	LSM12	100	84.694	ENSAMXG00000032952	lsm12b	100	84.694	Astyanax_mexicanus
ENSPCIG00000020244	LSM12	100	78.061	ENSAMXG00000036117	lsm12a	91	78.061	Astyanax_mexicanus
ENSPCIG00000020244	LSM12	100	96.923	ENSBTAG00000016252	LSM12	100	96.923	Bos_taurus
ENSPCIG00000020244	LSM12	100	96.923	ENSCJAG00000048480	LSM12	100	96.923	Callithrix_jacchus
ENSPCIG00000020244	LSM12	100	96.923	ENSCAFG00000014379	LSM12	92	96.923	Canis_familiaris
ENSPCIG00000020244	LSM12	100	96.923	ENSCAFG00020012173	LSM12	100	96.923	Canis_lupus_dingo
ENSPCIG00000020244	LSM12	100	96.923	ENSCHIG00000018175	LSM12	100	96.923	Capra_hircus
ENSPCIG00000020244	LSM12	100	96.923	ENSTSYG00000036361	LSM12	100	96.923	Carlito_syrichta
ENSPCIG00000020244	LSM12	83	91.975	ENSCAPG00000009647	LSM12	89	91.975	Cavia_aperea
ENSPCIG00000020244	LSM12	100	95.897	ENSCPOG00000012860	LSM12	100	96.330	Cavia_porcellus
ENSPCIG00000020244	LSM12	100	96.923	ENSCCAG00000032905	LSM12	100	96.923	Cebus_capucinus
ENSPCIG00000020244	LSM12	100	96.923	ENSCATG00000030577	-	100	96.923	Cercocebus_atys
ENSPCIG00000020244	LSM12	100	96.923	ENSCLAG00000015759	LSM12	100	96.923	Chinchilla_lanigera
ENSPCIG00000020244	LSM12	100	96.410	ENSCSAG00000003486	LSM12	100	96.410	Chlorocebus_sabaeus
ENSPCIG00000020244	LSM12	56	95.413	ENSCHOG00000001198	LSM12	100	95.413	Choloepus_hoffmanni
ENSPCIG00000020244	LSM12	99	94.301	ENSCPBG00000027105	LSM12	99	94.301	Chrysemys_picta_bellii
ENSPCIG00000020244	LSM12	100	96.923	ENSCANG00000043328	LSM12	100	96.923	Colobus_angolensis_palliatus
ENSPCIG00000020244	LSM12	100	96.923	ENSCGRG00001002094	Lsm12	100	96.923	Cricetulus_griseus_chok1gshd
ENSPCIG00000020244	LSM12	86	89.286	ENSCGRG00000004316	Lsm12	95	89.286	Cricetulus_griseus_crigri
ENSPCIG00000020244	LSM12	100	84.694	ENSCSEG00000008434	lsm12b	100	84.694	Cynoglossus_semilaevis
ENSPCIG00000020244	LSM12	100	84.694	ENSCVAG00000008755	lsm12b	100	84.694	Cyprinodon_variegatus
ENSPCIG00000020244	LSM12	100	76.020	ENSDARG00000028848	lsm12a	100	76.020	Danio_rerio
ENSPCIG00000020244	LSM12	100	85.204	ENSDARG00000109510	lsm12b	100	85.204	Danio_rerio
ENSPCIG00000020244	LSM12	100	97.436	ENSDNOG00000002418	LSM12	91	97.436	Dasypus_novemcinctus
ENSPCIG00000020244	LSM12	100	96.923	ENSDORG00000016381	Lsm12	100	96.923	Dipodomys_ordii
ENSPCIG00000020244	LSM12	83	32.530	FBgn0030364	Lsm12	76	32.335	Drosophila_melanogaster
ENSPCIG00000020244	LSM12	73	32.692	FBgn0036057	CG14164	82	32.692	Drosophila_melanogaster
ENSPCIG00000020244	LSM12	100	96.410	ENSETEG00000008374	LSM12	100	96.410	Echinops_telfairi
ENSPCIG00000020244	LSM12	90	84.571	ENSETEG00000011012	-	100	84.571	Echinops_telfairi
ENSPCIG00000020244	LSM12	84	62.805	ENSEBUG00000016299	lsm12a	92	62.805	Eptatretus_burgeri
ENSPCIG00000020244	LSM12	100	96.923	ENSEASG00005010155	LSM12	100	96.923	Equus_asinus_asinus
ENSPCIG00000020244	LSM12	100	96.923	ENSECAG00000009071	LSM12	100	96.923	Equus_caballus
ENSPCIG00000020244	LSM12	78	96.078	ENSEEUG00000002419	-	100	96.078	Erinaceus_europaeus
ENSPCIG00000020244	LSM12	100	83.673	ENSELUG00000015538	lsm12b	100	79.082	Esox_lucius
ENSPCIG00000020244	LSM12	100	82.143	ENSELUG00000000256	-	100	82.143	Esox_lucius
ENSPCIG00000020244	LSM12	100	96.923	ENSFCAG00000037021	LSM12	100	96.923	Felis_catus
ENSPCIG00000020244	LSM12	76	95.946	ENSFDAG00000008954	LSM12	87	95.946	Fukomys_damarensis
ENSPCIG00000020244	LSM12	100	83.673	ENSFHEG00000019913	lsm12b	100	83.673	Fundulus_heteroclitus
ENSPCIG00000020244	LSM12	81	84.177	ENSGMOG00000015449	lsm12b	100	84.177	Gadus_morhua
ENSPCIG00000020244	LSM12	78	95.425	ENSGALG00000039803	LSM12	100	95.425	Gallus_gallus
ENSPCIG00000020244	LSM12	100	84.184	ENSGAFG00000011829	lsm12b	100	84.184	Gambusia_affinis
ENSPCIG00000020244	LSM12	81	84.810	ENSGACG00000003428	lsm12b	100	84.810	Gasterosteus_aculeatus
ENSPCIG00000020244	LSM12	99	95.337	ENSGAGG00000021965	LSM12	99	95.337	Gopherus_agassizii
ENSPCIG00000020244	LSM12	100	96.923	ENSGGOG00000010589	-	100	96.923	Gorilla_gorilla
ENSPCIG00000020244	LSM12	85	84.431	ENSHBUG00000007667	lsm12b	74	84.431	Haplochromis_burtoni
ENSPCIG00000020244	LSM12	100	96.923	ENSHGLG00000011411	LSM12	100	96.923	Heterocephalus_glaber_female
ENSPCIG00000020244	LSM12	91	83.978	ENSHGLG00100000241	LSM12	96	83.978	Heterocephalus_glaber_male
ENSPCIG00000020244	LSM12	100	84.184	ENSHCOG00000002094	lsm12b	100	84.184	Hippocampus_comes
ENSPCIG00000020244	LSM12	100	85.204	ENSIPUG00000014800	lsm12	100	85.204	Ictalurus_punctatus
ENSPCIG00000020244	LSM12	99	74.742	ENSIPUG00000008936	lsm12a	99	74.742	Ictalurus_punctatus
ENSPCIG00000020244	LSM12	100	96.923	ENSSTOG00000007403	LSM12	100	96.923	Ictidomys_tridecemlineatus
ENSPCIG00000020244	LSM12	97	85.263	ENSJJAG00000011793	-	100	85.263	Jaculus_jaculus
ENSPCIG00000020244	LSM12	100	95.897	ENSJJAG00000004364	-	100	95.897	Jaculus_jaculus
ENSPCIG00000020244	LSM12	81	83.019	ENSJJAG00000014652	-	95	83.019	Jaculus_jaculus
ENSPCIG00000020244	LSM12	85	85.629	ENSKMAG00000007704	lsm12b	56	85.629	Kryptolebias_marmoratus
ENSPCIG00000020244	LSM12	100	85.714	ENSLBEG00000027999	lsm12b	100	85.714	Labrus_bergylta
ENSPCIG00000020244	LSM12	99	90.674	ENSLACG00000015981	LSM12	99	90.674	Latimeria_chalumnae
ENSPCIG00000020244	LSM12	100	84.184	ENSLOCG00000013079	lsm12b	99	84.184	Lepisosteus_oculatus
ENSPCIG00000020244	LSM12	100	96.923	ENSLAFG00000005202	LSM12	100	96.923	Loxodonta_africana
ENSPCIG00000020244	LSM12	100	96.923	ENSMFAG00000031376	LSM12	100	96.923	Macaca_fascicularis
ENSPCIG00000020244	LSM12	100	96.923	ENSMMUG00000006804	LSM12	100	96.923	Macaca_mulatta
ENSPCIG00000020244	LSM12	65	81.609	ENSMMUG00000042106	-	100	81.609	Macaca_mulatta
ENSPCIG00000020244	LSM12	65	81.609	ENSMMUG00000038408	-	100	81.609	Macaca_mulatta
ENSPCIG00000020244	LSM12	100	96.923	ENSMNEG00000030594	-	100	96.923	Macaca_nemestrina
ENSPCIG00000020244	LSM12	100	96.923	ENSMLEG00000039934	LSM12	100	96.923	Mandrillus_leucophaeus
ENSPCIG00000020244	LSM12	100	85.204	ENSMAMG00000004279	lsm12b	100	85.204	Mastacembelus_armatus
ENSPCIG00000020244	LSM12	100	84.694	ENSMZEG00005005754	lsm12b	100	84.694	Maylandia_zebra
ENSPCIG00000020244	LSM12	100	96.410	ENSMICG00000037219	LSM12	100	96.410	Microcebus_murinus
ENSPCIG00000020244	LSM12	100	81.538	ENSMOCG00000017015	-	86	81.538	Microtus_ochrogaster
ENSPCIG00000020244	LSM12	100	96.923	ENSMOCG00000019878	-	100	96.923	Microtus_ochrogaster
ENSPCIG00000020244	LSM12	100	85.204	ENSMMOG00000020848	lsm12b	100	85.204	Mola_mola
ENSPCIG00000020244	LSM12	100	85.204	ENSMALG00000007578	lsm12b	100	85.204	Monopterus_albus
ENSPCIG00000020244	LSM12	100	96.410	MGP_CAROLIEiJ_G0017241	Lsm12	100	96.410	Mus_caroli
ENSPCIG00000020244	LSM12	100	96.923	ENSMUSG00000020922	Lsm12	100	96.923	Mus_musculus
ENSPCIG00000020244	LSM12	100	89.151	MGP_PahariEiJ_G0018371	Lsm12	100	96.330	Mus_pahari
ENSPCIG00000020244	LSM12	100	96.410	MGP_SPRETEiJ_G0018084	Lsm12	99	100.000	Mus_spretus
ENSPCIG00000020244	LSM12	100	96.410	ENSMLUG00000006391	LSM12	100	96.410	Myotis_lucifugus
ENSPCIG00000020244	LSM12	100	96.923	ENSNGAG00000001870	Lsm12	100	96.923	Nannospalax_galili
ENSPCIG00000020244	LSM12	100	66.337	ENSNGAG00000015429	-	100	66.337	Nannospalax_galili
ENSPCIG00000020244	LSM12	100	84.694	ENSNBRG00000006266	lsm12b	100	84.694	Neolamprologus_brichardi
ENSPCIG00000020244	LSM12	100	96.923	ENSNLEG00000005580	-	100	96.923	Nomascus_leucogenys
ENSPCIG00000020244	LSM12	85	100.000	ENSMEUG00000007501	-	100	100.000	Notamacropus_eugenii
ENSPCIG00000020244	LSM12	100	96.923	ENSOPRG00000008552	LSM12	100	96.923	Ochotona_princeps
ENSPCIG00000020244	LSM12	100	96.410	ENSODEG00000017998	-	100	96.410	Octodon_degus
ENSPCIG00000020244	LSM12	100	86.667	ENSODEG00000007886	-	74	86.667	Octodon_degus
ENSPCIG00000020244	LSM12	100	84.694	ENSONIG00000007933	lsm12b	100	84.694	Oreochromis_niloticus
ENSPCIG00000020244	LSM12	99	90.206	ENSOCUG00000021254	-	100	90.206	Oryctolagus_cuniculus
ENSPCIG00000020244	LSM12	99	90.206	ENSOCUG00000027889	-	100	90.206	Oryctolagus_cuniculus
ENSPCIG00000020244	LSM12	99	89.175	ENSOCUG00000024823	-	100	89.175	Oryctolagus_cuniculus
ENSPCIG00000020244	LSM12	100	94.949	ENSOCUG00000008566	-	100	94.949	Oryctolagus_cuniculus
ENSPCIG00000020244	LSM12	100	85.204	ENSORLG00000011310	lsm12b	100	85.204	Oryzias_latipes
ENSPCIG00000020244	LSM12	100	85.204	ENSORLG00020002060	lsm12b	92	85.204	Oryzias_latipes_hni
ENSPCIG00000020244	LSM12	100	85.204	ENSORLG00015001647	lsm12b	92	85.204	Oryzias_latipes_hsok
ENSPCIG00000020244	LSM12	100	85.204	ENSOMEG00000006184	lsm12b	92	85.204	Oryzias_melastigma
ENSPCIG00000020244	LSM12	100	96.410	ENSOGAG00000010489	LSM12	100	96.410	Otolemur_garnettii
ENSPCIG00000020244	LSM12	100	93.532	ENSOARG00000006589	LSM12	100	93.532	Ovis_aries
ENSPCIG00000020244	LSM12	100	86.667	ENSPPAG00000034974	-	92	100.000	Pan_paniscus
ENSPCIG00000020244	LSM12	100	96.923	ENSPPRG00000023420	LSM12	100	96.923	Panthera_pardus
ENSPCIG00000020244	LSM12	78	96.078	ENSPTIG00000012704	-	82	96.078	Panthera_tigris_altaica
ENSPCIG00000020244	LSM12	73	92.793	ENSPTIG00000014850	-	100	92.793	Panthera_tigris_altaica
ENSPCIG00000020244	LSM12	100	96.923	ENSPTRG00000009261	LSM12	100	96.923	Pan_troglodytes
ENSPCIG00000020244	LSM12	100	96.923	ENSPANG00000021315	-	100	96.923	Papio_anubis
ENSPCIG00000020244	LSM12	100	85.714	ENSPKIG00000021058	lsm12b	100	85.714	Paramormyrops_kingsleyae
ENSPCIG00000020244	LSM12	99	76.289	ENSPKIG00000017932	-	99	76.289	Paramormyrops_kingsleyae
ENSPCIG00000020244	LSM12	100	84.694	ENSPMGG00000021344	lsm12b	100	84.694	Periophthalmus_magnuspinnatus
ENSPCIG00000020244	LSM12	100	96.923	ENSPEMG00000012199	Lsm12	100	96.923	Peromyscus_maniculatus_bairdii
ENSPCIG00000020244	LSM12	88	65.698	ENSPMAG00000005461	lsm12a	99	65.698	Petromyzon_marinus
ENSPCIG00000020244	LSM12	100	83.163	ENSPFOG00000015930	lsm12b	100	83.163	Poecilia_formosa
ENSPCIG00000020244	LSM12	100	83.163	ENSPLAG00000021089	lsm12b	100	83.163	Poecilia_latipinna
ENSPCIG00000020244	LSM12	100	83.163	ENSPMEG00000012961	lsm12b	100	83.163	Poecilia_mexicana
ENSPCIG00000020244	LSM12	88	85.380	ENSPREG00000010236	lsm12b	95	85.380	Poecilia_reticulata
ENSPCIG00000020244	LSM12	100	96.923	ENSPPYG00000008344	LSM12	100	96.923	Pongo_abelii
ENSPCIG00000020244	LSM12	82	97.484	ENSPCAG00000008790	LSM12	100	97.484	Procavia_capensis
ENSPCIG00000020244	LSM12	100	96.923	ENSPCOG00000027951	LSM12	100	96.923	Propithecus_coquereli
ENSPCIG00000020244	LSM12	100	96.410	ENSPVAG00000013706	LSM12	100	96.410	Pteropus_vampyrus
ENSPCIG00000020244	LSM12	100	84.694	ENSPNYG00000003386	lsm12b	100	84.694	Pundamilia_nyererei
ENSPCIG00000020244	LSM12	100	83.163	ENSPNAG00000004186	lsm12b	100	83.163	Pygocentrus_nattereri
ENSPCIG00000020244	LSM12	100	76.531	ENSPNAG00000018435	lsm12a	100	76.531	Pygocentrus_nattereri
ENSPCIG00000020244	LSM12	100	96.923	ENSRNOG00000020894	Lsm12	100	96.923	Rattus_norvegicus
ENSPCIG00000020244	LSM12	100	96.923	ENSRBIG00000027910	LSM12	100	96.923	Rhinopithecus_bieti
ENSPCIG00000020244	LSM12	100	58.462	ENSRROG00000000537	-	100	58.462	Rhinopithecus_roxellana
ENSPCIG00000020244	LSM12	100	96.923	ENSRROG00000045530	-	100	96.923	Rhinopithecus_roxellana
ENSPCIG00000020244	LSM12	100	96.923	ENSSBOG00000025310	LSM12	100	96.923	Saimiri_boliviensis_boliviensis
ENSPCIG00000020244	LSM12	81	98.101	ENSSHAG00000014914	LSM12	100	98.101	Sarcophilus_harrisii
ENSPCIG00000020244	LSM12	100	83.163	ENSSFOG00015020392	lsm12a	100	83.163	Scleropages_formosus
ENSPCIG00000020244	LSM12	100	85.204	ENSSFOG00015009612	lsm12	100	85.204	Scleropages_formosus
ENSPCIG00000020244	LSM12	100	85.204	ENSSMAG00000008089	lsm12b	100	85.204	Scophthalmus_maximus
ENSPCIG00000020244	LSM12	100	86.224	ENSSDUG00000012711	lsm12b	100	86.224	Seriola_dumerili
ENSPCIG00000020244	LSM12	100	86.224	ENSSLDG00000007404	lsm12b	100	86.224	Seriola_lalandi_dorsalis
ENSPCIG00000020244	LSM12	78	95.425	ENSSARG00000005537	LSM12	100	95.425	Sorex_araneus
ENSPCIG00000020244	LSM12	99	95.855	ENSSPUG00000011984	LSM12	99	95.855	Sphenodon_punctatus
ENSPCIG00000020244	LSM12	100	85.714	ENSSPAG00000017058	lsm12b	100	85.714	Stegastes_partitus
ENSPCIG00000020244	LSM12	100	96.923	ENSSSCG00000032394	LSM12	100	96.923	Sus_scrofa
ENSPCIG00000020244	LSM12	100	84.184	ENSTRUG00000007121	lsm12b	100	84.184	Takifugu_rubripes
ENSPCIG00000020244	LSM12	100	84.694	ENSTNIG00000014436	lsm12b	100	84.694	Tetraodon_nigroviridis
ENSPCIG00000020244	LSM12	100	96.410	ENSTBEG00000012523	-	100	96.410	Tupaia_belangeri
ENSPCIG00000020244	LSM12	100	93.333	ENSTBEG00000012392	-	100	93.333	Tupaia_belangeri
ENSPCIG00000020244	LSM12	100	96.923	ENSTTRG00000010433	LSM12	100	96.923	Tursiops_truncatus
ENSPCIG00000020244	LSM12	100	96.923	ENSUAMG00000006313	LSM12	100	96.923	Ursus_americanus
ENSPCIG00000020244	LSM12	81	93.038	ENSUMAG00000012987	LSM12	90	93.038	Ursus_maritimus
ENSPCIG00000020244	LSM12	100	91.282	ENSVPAG00000011145	LSM12	100	91.282	Vicugna_pacos
ENSPCIG00000020244	LSM12	100	96.923	ENSVVUG00000017581	LSM12	100	96.923	Vulpes_vulpes
ENSPCIG00000020244	LSM12	82	64.375	ENSXETG00000003371	lsm12	77	64.375	Xenopus_tropicalis
ENSPCIG00000020244	LSM12	100	84.184	ENSXCOG00000003994	lsm12b	100	84.184	Xiphophorus_couchianus
ENSPCIG00000020244	LSM12	100	84.184	ENSXMAG00000020950	lsm12b	100	84.184	Xiphophorus_maculatus