EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPCIG00000020270 (Gene tree)
Gene ID
110214187
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Phascolarctos_cinereus
Status
putative
Strand
Minus strand
Length
13422 bases
Position
chrFUWB01000428.1:2808841-2822262
Accession
110214187
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCIP00000027142RRM_1PF00076.221.2e-4312
ENSPCIP00000027142RRM_1PF00076.221.2e-4322
ENSPCIP00000027155RRM_1PF00076.221.6e-4312
ENSPCIP00000027155RRM_1PF00076.221.6e-4322
ENSPCIP00000027139RRM_1PF00076.221.6e-4312
ENSPCIP00000027139RRM_1PF00076.221.6e-4322
ENSPCIP00000027133RRM_1PF00076.221.7e-4312
ENSPCIP00000027133RRM_1PF00076.221.7e-4322
ENSPCIP00000027140RRM_1PF00076.221.7e-4312
ENSPCIP00000027140RRM_1PF00076.221.7e-4322
ENSPCIP00000027154RRM_1PF00076.221.8e-4312
ENSPCIP00000027154RRM_1PF00076.221.8e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCIT00000033395PUF60-2051725XM_020994960ENSPCIP00000027154574 (aa)XP_020850619-
ENSPCIT00000033396PUF60-2061674XM_020994962ENSPCIP00000027155557 (aa)XP_020850621-
ENSPCIT00000033373PUF60-2011704XM_020994960ENSPCIP00000027133567 (aa)XP_020850619-
ENSPCIT00000033382PUF60-2041581-ENSPCIP00000027142526 (aa)--
ENSPCIT00000033380PUF60-2031704XM_020994960ENSPCIP00000027140567 (aa)XP_020850619-
ENSPCIT00000033379PUF60-2021689-ENSPCIP00000027139562 (aa)--
Gene Model
Click here to download ENSPCIG00000020270's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000020270's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPCIG00000020270PUF605135.294ENSPCIG00000018013U2AF26037.255
ENSPCIG00000020270PUF605630.233ENSPCIG00000000267-6430.233
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCIG00000020270PUF609999.232ENSG00000179950PUF6010099.419Homo_sapiens
ENSPCIG00000020270PUF609986.069ENSAPOG00000001713puf60b9985.795Acanthochromis_polyacanthus
ENSPCIG00000020270PUF609997.505ENSAMEG00000006406PUF609894.516Ailuropoda_melanoleuca
ENSPCIG00000020270PUF609885.605ENSACIG00000021705puf60b10085.605Amphilophus_citrinellus
ENSPCIG00000020270PUF609877.351ENSACIG00000003263-9977.778Amphilophus_citrinellus
ENSPCIG00000020270PUF609986.069ENSAOCG00000005395puf60b10086.564Amphiprion_ocellaris
ENSPCIG00000020270PUF609882.115ENSAOCG00000015558-9981.939Amphiprion_ocellaris
ENSPCIG00000020270PUF609980.534ENSAPEG00000011923puf60b9982.975Amphiprion_percula
ENSPCIG00000020270PUF609872.745ENSAPEG00000001836-9976.667Amphiprion_percula
ENSPCIG00000020270PUF609985.714ENSATEG00000001730puf60b9985.606Anabas_testudineus
ENSPCIG00000020270PUF609981.418ENSATEG00000006303-10080.639Anabas_testudineus
ENSPCIG00000020270PUF609998.464ENSAPLG00000010150PUF6010098.659Anas_platyrhynchos
ENSPCIG00000020270PUF609996.388ENSACAG00000001645PUF609796.756Anolis_carolinensis
ENSPCIG00000020270PUF609999.232ENSANAG00000018626PUF6010099.419Aotus_nancymaae
ENSPCIG00000020270PUF609885.605ENSACLG00000004462puf60b10085.605Astatotilapia_calliptera
ENSPCIG00000020270PUF609876.449ENSAMXG00000041030puf60b10074.719Astyanax_mexicanus
ENSPCIG00000020270PUF609984.299ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSPCIG00000020270PUF609999.424ENSBTAG00000037493PUF609999.617Bos_taurus
ENSPCIG00000020270PUF608050.162WBGene00004389rnp-68650.962Caenorhabditis_elegans
ENSPCIG00000020270PUF609999.424ENSCJAG00000021485PUF609999.235Callithrix_jacchus
ENSPCIG00000020270PUF609999.232ENSCAFG00000001400PUF609895.811Canis_familiaris
ENSPCIG00000020270PUF609999.616ENSCAFG00020018754PUF609999.426Canis_lupus_dingo
ENSPCIG00000020270PUF609999.424ENSCHIG00000001618PUF609196.527Capra_hircus
ENSPCIG00000020270PUF609999.424ENSTSYG00000011912PUF6010099.806Carlito_syrichta
ENSPCIG00000020270PUF609994.095ENSCPOG00000014613PUF609990.794Cavia_porcellus
ENSPCIG00000020270PUF609999.232ENSCCAG00000007744PUF609999.044Cebus_capucinus
ENSPCIG00000020270PUF609999.232ENSCATG00000035405PUF609999.044Cercocebus_atys
ENSPCIG00000020270PUF609999.808ENSCLAG00000009154PUF609895.676Chinchilla_lanigera
ENSPCIG00000020270PUF609899.419ENSCSAG00000008878PUF6010099.419Chlorocebus_sabaeus
ENSPCIG00000020270PUF609998.282ENSCPBG00000005595PUF609998.282Chrysemys_picta_bellii
ENSPCIG00000020270PUF6010047.794ENSCING00000008436-9848.956Ciona_intestinalis
ENSPCIG00000020270PUF606359.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSPCIG00000020270PUF609655.556ENSCSAVG00000001385-9955.192Ciona_savignyi
ENSPCIG00000020270PUF609649.605ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSPCIG00000020270PUF607999.520ENSCANG00000041843PUF6010099.520Colobus_angolensis_palliatus
ENSPCIG00000020270PUF609999.232ENSCGRG00001017442Puf609894.955Cricetulus_griseus_chok1gshd
ENSPCIG00000020270PUF609999.232ENSCGRG00000003717Puf609895.298Cricetulus_griseus_crigri
ENSPCIG00000020270PUF609872.467ENSCSEG00000014845-9771.504Cynoglossus_semilaevis
ENSPCIG00000020270PUF609985.143ENSCSEG00000019887puf60b9384.820Cynoglossus_semilaevis
ENSPCIG00000020270PUF609884.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSPCIG00000020270PUF609080.000ENSCVAG00000001560-9879.747Cyprinodon_variegatus
ENSPCIG00000020270PUF609878.947ENSDARG00000001241puf60b9996.032Danio_rerio
ENSPCIG00000020270PUF609886.932ENSDARG00000032175puf60a9994.043Danio_rerio
ENSPCIG00000020270PUF609684.418ENSDNOG00000043278PUF609084.418Dasypus_novemcinctus
ENSPCIG00000020270PUF609999.616ENSDORG00000004585Puf609996.533Dipodomys_ordii
ENSPCIG00000020270PUF609648.969FBgn0028577hfp9949.288Drosophila_melanogaster
ENSPCIG00000020270PUF609861.017ENSEBUG00000014291puf60b8864.214Eptatretus_burgeri
ENSPCIG00000020270PUF609670.040ENSEBUG00000005470-9268.846Eptatretus_burgeri
ENSPCIG00000020270PUF609999.616ENSEASG00005009695PUF609999.426Equus_asinus_asinus
ENSPCIG00000020270PUF609999.616ENSECAG00000024681PUF609899.429Equus_caballus
ENSPCIG00000020270PUF609983.939ENSELUG00000006507puf60b9981.967Esox_lucius
ENSPCIG00000020270PUF609985.417ENSELUG00000018443-9985.996Esox_lucius
ENSPCIG00000020270PUF609999.232ENSFCAG00000001045PUF6010099.419Felis_catus
ENSPCIG00000020270PUF609985.660ENSFALG00000001136PUF609986.832Ficedula_albicollis
ENSPCIG00000020270PUF609999.424ENSFDAG00000017177PUF609895.315Fukomys_damarensis
ENSPCIG00000020270PUF609885.029ENSFHEG00000020046puf60b10086.180Fundulus_heteroclitus
ENSPCIG00000020270PUF609479.317ENSFHEG00000021687PUF6010080.164Fundulus_heteroclitus
ENSPCIG00000020270PUF609972.075ENSGMOG00000006392puf60b10071.241Gadus_morhua
ENSPCIG00000020270PUF606598.547ENSGALG00000039901PUF609498.547Gallus_gallus
ENSPCIG00000020270PUF609884.453ENSGAFG00000021040puf60b10085.605Gambusia_affinis
ENSPCIG00000020270PUF609879.537ENSGAFG00000004334-9979.042Gambusia_affinis
ENSPCIG00000020270PUF609870.793ENSGACG00000001484-10069.423Gasterosteus_aculeatus
ENSPCIG00000020270PUF609973.396ENSGACG00000004717puf60b9972.727Gasterosteus_aculeatus
ENSPCIG00000020270PUF609998.282ENSGAGG00000013289PUF609595.764Gopherus_agassizii
ENSPCIG00000020270PUF609999.232ENSGGOG00000004646PUF609999.044Gorilla_gorilla
ENSPCIG00000020270PUF609885.605ENSHBUG00000015118puf60b10085.605Haplochromis_burtoni
ENSPCIG00000020270PUF609882.534ENSHBUG00000009634-10082.738Haplochromis_burtoni
ENSPCIG00000020270PUF609999.424ENSHGLG00000006111PUF609895.315Heterocephalus_glaber_female
ENSPCIG00000020270PUF609999.424ENSHGLG00100012362PUF609895.315Heterocephalus_glaber_male
ENSPCIG00000020270PUF609882.320ENSHCOG00000015541puf60b10081.919Hippocampus_comes
ENSPCIG00000020270PUF609666.798ENSHCOG00000000378-9965.038Hippocampus_comes
ENSPCIG00000020270PUF609882.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSPCIG00000020270PUF609878.759ENSIPUG00000004660puf60b9978.531Ictalurus_punctatus
ENSPCIG00000020270PUF609999.808ENSSTOG00000025037PUF609896.892Ictidomys_tridecemlineatus
ENSPCIG00000020270PUF609999.424ENSJJAG00000001076Puf609895.826Jaculus_jaculus
ENSPCIG00000020270PUF609878.450ENSKMAG00000010106-10075.933Kryptolebias_marmoratus
ENSPCIG00000020270PUF609885.029ENSKMAG00000016745puf60b10086.180Kryptolebias_marmoratus
ENSPCIG00000020270PUF6010084.416ENSLBEG00000012505puf60b10084.416Labrus_bergylta
ENSPCIG00000020270PUF606990.909ENSLACG00000005456PUF6010090.437Latimeria_chalumnae
ENSPCIG00000020270PUF609990.649ENSLOCG00000010106puf60b9989.544Lepisosteus_oculatus
ENSPCIG00000020270PUF609998.273ENSLAFG00000022929PUF609895.247Loxodonta_africana
ENSPCIG00000020270PUF609999.232ENSMFAG00000043373PUF609999.425Macaca_fascicularis
ENSPCIG00000020270PUF609999.232ENSMMUG00000013558PUF609999.044Macaca_mulatta
ENSPCIG00000020270PUF609999.232ENSMNEG00000031099PUF609999.044Macaca_nemestrina
ENSPCIG00000020270PUF609899.419ENSMLEG00000040009PUF6010099.419Mandrillus_leucophaeus
ENSPCIG00000020270PUF609883.301ENSMAMG00000019476-10081.273Mastacembelus_armatus
ENSPCIG00000020270PUF609985.524ENSMAMG00000010394puf60b10083.925Mastacembelus_armatus
ENSPCIG00000020270PUF609885.605ENSMZEG00005018515puf60b10085.605Maylandia_zebra
ENSPCIG00000020270PUF609882.726ENSMZEG00005019425-10081.086Maylandia_zebra
ENSPCIG00000020270PUF609998.464ENSMGAG00000013070PUF609998.286Meleagris_gallopavo
ENSPCIG00000020270PUF609480.561ENSMAUG00000018549-9583.402Mesocricetus_auratus
ENSPCIG00000020270PUF606999.178ENSMAUG00000014267-9793.451Mesocricetus_auratus
ENSPCIG00000020270PUF6010098.859ENSMICG00000012226PUF6010098.859Microcebus_murinus
ENSPCIG00000020270PUF609999.424ENSMOCG00000018780Puf609995.135Microtus_ochrogaster
ENSPCIG00000020270PUF609873.501ENSMMOG00000018059-9976.712Mola_mola
ENSPCIG00000020270PUF609885.988ENSMMOG00000004217puf60b10085.988Mola_mola
ENSPCIG00000020270PUF609999.232ENSMODG00000009161PUF609599.426Monodelphis_domestica
ENSPCIG00000020270PUF609978.095ENSMALG00000006797puf60b9978.030Monopterus_albus
ENSPCIG00000020270PUF609881.382ENSMALG00000000200-10078.399Monopterus_albus
ENSPCIG00000020270PUF609999.040MGP_CAROLIEiJ_G0019910Puf609894.955Mus_caroli
ENSPCIG00000020270PUF609999.040ENSMUSG00000002524Puf609894.955Mus_musculus
ENSPCIG00000020270PUF609999.040MGP_PahariEiJ_G0019920Puf609894.955Mus_pahari
ENSPCIG00000020270PUF609999.040MGP_SPRETEiJ_G0020812Puf609894.955Mus_spretus
ENSPCIG00000020270PUF609999.424ENSMPUG00000008137PUF609895.660Mustela_putorius_furo
ENSPCIG00000020270PUF609998.848ENSMLUG00000000238-9895.978Myotis_lucifugus
ENSPCIG00000020270PUF609992.161ENSMLUG00000013032-9895.644Myotis_lucifugus
ENSPCIG00000020270PUF609999.424ENSNGAG00000000712Puf6010099.612Nannospalax_galili
ENSPCIG00000020270PUF608084.235ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSPCIG00000020270PUF609982.443ENSNBRG00000017223-10081.238Neolamprologus_brichardi
ENSPCIG00000020270PUF609999.232ENSNLEG00000002156PUF609999.044Nomascus_leucogenys
ENSPCIG00000020270PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSPCIG00000020270PUF6072100.000ENSODEG00000014024-97100.000Octodon_degus
ENSPCIG00000020270PUF609674.359ENSODEG00000015513-9672.868Octodon_degus
ENSPCIG00000020270PUF609984.952ENSONIG00000006247puf60b9984.848Oreochromis_niloticus
ENSPCIG00000020270PUF609982.443ENSONIG00000014030-9982.197Oreochromis_niloticus
ENSPCIG00000020270PUF609678.627ENSOANG00000006962PUF609978.447Ornithorhynchus_anatinus
ENSPCIG00000020270PUF609878.788ENSORLG00000028655-9978.897Oryzias_latipes
ENSPCIG00000020270PUF609984.499ENSORLG00000012279puf60b10085.029Oryzias_latipes
ENSPCIG00000020270PUF609984.499ENSORLG00020007333puf6010085.029Oryzias_latipes_hni
ENSPCIG00000020270PUF609878.937ENSORLG00020018144-9978.424Oryzias_latipes_hni
ENSPCIG00000020270PUF609983.616ENSORLG00015007718puf60b10084.895Oryzias_latipes_hsok
ENSPCIG00000020270PUF609878.937ENSORLG00015016833-9978.236Oryzias_latipes_hsok
ENSPCIG00000020270PUF609982.222ENSOMEG00000001643puf60b9983.232Oryzias_melastigma
ENSPCIG00000020270PUF609879.962ENSOMEG00000022185-9979.323Oryzias_melastigma
ENSPCIG00000020270PUF609999.808ENSOGAG00000006259PUF609896.715Otolemur_garnettii
ENSPCIG00000020270PUF609996.929ENSOARG00000016235PUF609997.132Ovis_aries
ENSPCIG00000020270PUF609999.232ENSPPAG00000029933PUF609999.044Pan_paniscus
ENSPCIG00000020270PUF609999.232ENSPPRG00000003257PUF6010099.419Panthera_pardus
ENSPCIG00000020270PUF609996.929ENSPTIG00000009795PUF609997.126Panthera_tigris_altaica
ENSPCIG00000020270PUF609999.040ENSPTRG00000043963-9998.853Pan_troglodytes
ENSPCIG00000020270PUF609999.040ENSPTRG00000020670PUF609998.853Pan_troglodytes
ENSPCIG00000020270PUF609999.232ENSPANG00000021936PUF609999.044Papio_anubis
ENSPCIG00000020270PUF609886.998ENSPKIG00000004295puf60a9992.647Paramormyrops_kingsleyae
ENSPCIG00000020270PUF609888.269ENSPKIG00000012204puf60b10088.269Paramormyrops_kingsleyae
ENSPCIG00000020270PUF609998.273ENSPSIG00000004679PUF609998.470Pelodiscus_sinensis
ENSPCIG00000020270PUF609884.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSPCIG00000020270PUF609999.424ENSPEMG00000008820Puf609994.296Peromyscus_maniculatus_bairdii
ENSPCIG00000020270PUF609983.932ENSPFOG00000019217puf60b9984.932Poecilia_formosa
ENSPCIG00000020270PUF609880.925ENSPFOG00000011118-9980.266Poecilia_formosa
ENSPCIG00000020270PUF609880.925ENSPLAG00000017025-9578.650Poecilia_latipinna
ENSPCIG00000020270PUF609885.029ENSPLAG00000010754puf60b10086.180Poecilia_latipinna
ENSPCIG00000020270PUF609885.029ENSPMEG00000000838puf60b10086.180Poecilia_mexicana
ENSPCIG00000020270PUF609880.925ENSPMEG00000009767-9578.832Poecilia_mexicana
ENSPCIG00000020270PUF609981.215ENSPREG00000005440puf60b10083.929Poecilia_reticulata
ENSPCIG00000020270PUF607997.842ENSPPYG00000018951-9597.842Pongo_abelii
ENSPCIG00000020270PUF607999.760ENSPCAG00000014837PUF6010099.760Procavia_capensis
ENSPCIG00000020270PUF6010098.669ENSPCOG00000027981PUF6010098.669Propithecus_coquereli
ENSPCIG00000020270PUF6098100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSPCIG00000020270PUF609882.726ENSPNYG00000004273-10081.086Pundamilia_nyererei
ENSPCIG00000020270PUF609885.605ENSPNYG00000002556puf60b10085.605Pundamilia_nyererei
ENSPCIG00000020270PUF609976.792ENSPNAG00000019415puf60b9276.255Pygocentrus_nattereri
ENSPCIG00000020270PUF609982.453ENSPNAG00000019909puf60a9984.961Pygocentrus_nattereri
ENSPCIG00000020270PUF609999.040ENSRNOG00000009960Puf609894.955Rattus_norvegicus
ENSPCIG00000020270PUF609999.232ENSRBIG00000035274PUF609999.044Rhinopithecus_bieti
ENSPCIG00000020270PUF6010098.479ENSRROG00000029360PUF609999.425Rhinopithecus_roxellana
ENSPCIG00000020270PUF609998.081ENSSBOG00000027089PUF609997.714Saimiri_boliviensis_boliviensis
ENSPCIG00000020270PUF608998.934ENSSHAG00000006668PUF609495.556Sarcophilus_harrisii
ENSPCIG00000020270PUF609882.418ENSSFOG00015019371puf60a9887.525Scleropages_formosus
ENSPCIG00000020270PUF609486.437ENSSFOG00015019619puf60b9986.437Scleropages_formosus
ENSPCIG00000020270PUF607292.883ENSSMAG00000016381puf60b7492.281Scophthalmus_maximus
ENSPCIG00000020270PUF609781.081ENSSDUG00000007048-9980.151Seriola_dumerili
ENSPCIG00000020270PUF609983.488ENSSDUG00000009935puf60b9984.646Seriola_dumerili
ENSPCIG00000020270PUF609985.633ENSSLDG00000024011puf60b10084.112Seriola_lalandi_dorsalis
ENSPCIG00000020270PUF609880.418ENSSLDG00000007366-9980.835Seriola_lalandi_dorsalis
ENSPCIG00000020270PUF606486.431ENSSPUG00000013518PUF609485.757Sphenodon_punctatus
ENSPCIG00000020270PUF609882.061ENSSPAG00000020285-10082.634Stegastes_partitus
ENSPCIG00000020270PUF609983.271ENSSPAG00000012144puf60b10084.299Stegastes_partitus
ENSPCIG00000020270PUF609999.040ENSSSCG00000038800PUF609998.235Sus_scrofa
ENSPCIG00000020270PUF609995.202ENSTGUG00000012797-10095.402Taeniopygia_guttata
ENSPCIG00000020270PUF609984.381ENSTRUG00000005420puf60b10082.804Takifugu_rubripes
ENSPCIG00000020270PUF609877.713ENSTRUG00000008843-10080.361Takifugu_rubripes
ENSPCIG00000020270PUF609978.227ENSTNIG00000003069-10078.011Tetraodon_nigroviridis
ENSPCIG00000020270PUF609984.381ENSTNIG00000013675puf60b10084.091Tetraodon_nigroviridis
ENSPCIG00000020270PUF606196.284ENSTBEG00000002751-9996.271Tupaia_belangeri
ENSPCIG00000020270PUF607981.503ENSTBEG00000001899-10081.792Tupaia_belangeri
ENSPCIG00000020270PUF609899.031ENSTTRG00000017088PUF6010099.031Tursiops_truncatus
ENSPCIG00000020270PUF609999.616ENSUAMG00000024917PUF609999.426Ursus_americanus
ENSPCIG00000020270PUF609994.818ENSUMAG00000000272PUF609891.408Ursus_maritimus
ENSPCIG00000020270PUF609999.616ENSVVUG00000022527PUF6010099.806Vulpes_vulpes
ENSPCIG00000020270PUF609995.000ENSXETG00000012469puf609995.030Xenopus_tropicalis
ENSPCIG00000020270PUF609881.766ENSXCOG00000012355puf60b10085.714Xiphophorus_couchianus
ENSPCIG00000020270PUF609878.571ENSXMAG00000010507-9979.764Xiphophorus_maculatus
ENSPCIG00000020270PUF609885.029ENSXMAG00000001862puf60b10086.180Xiphophorus_maculatus

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