EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000020347 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 82970 bases
Position: chrFUWB01000430.1:91375-174344
Accession: 29190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000027242	Ago_hook	PF10427.9	1e-17	1	1
ENSPCIP00000027238	Ago_hook	PF10427.9	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000033501	TNRC6B-202	6062	-	ENSPCIP00000027242	1766 (aa)	-	-
ENSPCIT00000033496	TNRC6B-201	6233	-	ENSPCIP00000027238	1823 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000020347's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000020347's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000020347	TNRC6B	99	37.850	ENSPCIG00000012106	TNRC6A	68	40.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000020347	TNRC6B	99	87.817	ENSG00000100354	TNRC6B	99	87.541	Homo_sapiens
ENSPCIG00000020347	TNRC6B	99	87.596	ENSAMEG00000011025	TNRC6B	98	87.596	Ailuropoda_melanoleuca
ENSPCIG00000020347	TNRC6B	99	80.193	ENSAPLG00000009347	TNRC6B	99	82.450	Anas_platyrhynchos
ENSPCIG00000020347	TNRC6B	99	71.873	ENSACAG00000007281	TNRC6B	99	71.744	Anolis_carolinensis
ENSPCIG00000020347	TNRC6B	99	87.321	ENSANAG00000035042	TNRC6B	99	87.431	Aotus_nancymaae
ENSPCIG00000020347	TNRC6B	68	48.053	ENSAMXG00000008707	tnrc6b	68	46.619	Astyanax_mexicanus
ENSPCIG00000020347	TNRC6B	99	87.397	ENSBTAG00000021076	TNRC6B	99	87.122	Bos_taurus
ENSPCIG00000020347	TNRC6B	99	87.045	ENSCJAG00000002732	TNRC6B	99	93.239	Callithrix_jacchus
ENSPCIG00000020347	TNRC6B	99	87.631	ENSCAFG00000001255	TNRC6B	99	87.521	Canis_familiaris
ENSPCIG00000020347	TNRC6B	99	86.705	ENSCAFG00020002189	TNRC6B	99	85.477	Canis_lupus_dingo
ENSPCIG00000020347	TNRC6B	99	86.761	ENSCHIG00000003491	TNRC6B	98	86.875	Capra_hircus
ENSPCIG00000020347	TNRC6B	99	87.541	ENSTSYG00000011836	TNRC6B	99	87.211	Carlito_syrichta
ENSPCIG00000020347	TNRC6B	99	86.103	ENSCPOG00000005705	TNRC6B	98	85.876	Cavia_porcellus
ENSPCIG00000020347	TNRC6B	99	86.273	ENSCCAG00000019912	TNRC6B	99	86.329	Cebus_capucinus
ENSPCIG00000020347	TNRC6B	99	87.350	ENSCATG00000029291	TNRC6B	99	87.064	Cercocebus_atys
ENSPCIG00000020347	TNRC6B	99	86.144	ENSCLAG00000016942	TNRC6B	97	86.201	Chinchilla_lanigera
ENSPCIG00000020347	TNRC6B	99	83.788	ENSCSAG00000006021	TNRC6B	98	83.675	Chlorocebus_sabaeus
ENSPCIG00000020347	TNRC6B	92	83.285	ENSCPBG00000022932	TNRC6B	99	83.401	Chrysemys_picta_bellii
ENSPCIG00000020347	TNRC6B	99	87.603	ENSCANG00000030776	TNRC6B	99	87.328	Colobus_angolensis_palliatus
ENSPCIG00000020347	TNRC6B	95	86.128	ENSCGRG00001020166	Tnrc6b	96	85.832	Cricetulus_griseus_chok1gshd
ENSPCIG00000020347	TNRC6B	99	86.087	ENSCGRG00000016696	Tnrc6b	98	85.804	Cricetulus_griseus_crigri
ENSPCIG00000020347	TNRC6B	99	87.321	ENSDNOG00000012744	TNRC6B	98	87.194	Dasypus_novemcinctus
ENSPCIG00000020347	TNRC6B	99	86.853	ENSDORG00000003386	Tnrc6b	97	86.910	Dipodomys_ordii
ENSPCIG00000020347	TNRC6B	99	76.123	ENSETEG00000006570	TNRC6B	98	76.634	Echinops_telfairi
ENSPCIG00000020347	TNRC6B	100	86.359	ENSEASG00005005306	TNRC6B	99	87.080	Equus_asinus_asinus
ENSPCIG00000020347	TNRC6B	96	91.500	ENSECAG00000009759	TNRC6B	99	91.500	Equus_caballus
ENSPCIG00000020347	TNRC6B	58	96.364	ENSEEUG00000008690	-	59	90.842	Erinaceus_europaeus
ENSPCIG00000020347	TNRC6B	99	87.527	ENSFCAG00000004791	TNRC6B	99	87.418	Felis_catus
ENSPCIG00000020347	TNRC6B	96	85.068	ENSFALG00000012195	TNRC6B	100	84.950	Ficedula_albicollis
ENSPCIG00000020347	TNRC6B	99	86.193	ENSFDAG00000021368	TNRC6B	97	86.250	Fukomys_damarensis
ENSPCIG00000020347	TNRC6B	99	86.128	ENSGALG00000012050	TNRC6B	96	85.844	Gallus_gallus
ENSPCIG00000020347	TNRC6B	99	85.448	ENSGAGG00000025188	TNRC6B	98	85.118	Gopherus_agassizii
ENSPCIG00000020347	TNRC6B	99	87.872	ENSGGOG00000008444	TNRC6B	99	87.596	Gorilla_gorilla
ENSPCIG00000020347	TNRC6B	99	86.546	ENSHGLG00000009306	TNRC6B	100	86.188	Heterocephalus_glaber_female
ENSPCIG00000020347	TNRC6B	99	86.511	ENSHGLG00100018108	TNRC6B	98	85.828	Heterocephalus_glaber_male
ENSPCIG00000020347	TNRC6B	81	43.225	ENSIPUG00000001515	tnrc6b	55	48.630	Ictalurus_punctatus
ENSPCIG00000020347	TNRC6B	99	86.682	ENSSTOG00000008927	TNRC6B	97	86.796	Ictidomys_tridecemlineatus
ENSPCIG00000020347	TNRC6B	99	85.731	ENSJJAG00000015779	Tnrc6b	97	85.731	Jaculus_jaculus
ENSPCIG00000020347	TNRC6B	99	59.834	ENSLACG00000000628	-	99	60.055	Latimeria_chalumnae
ENSPCIG00000020347	TNRC6B	79	88.341	ENSLAFG00000014473	TNRC6B	100	90.295	Loxodonta_africana
ENSPCIG00000020347	TNRC6B	99	87.350	ENSMFAG00000003862	TNRC6B	99	87.064	Macaca_fascicularis
ENSPCIG00000020347	TNRC6B	99	87.372	ENSMMUG00000021345	TNRC6B	94	91.402	Macaca_mulatta
ENSPCIG00000020347	TNRC6B	99	87.315	ENSMNEG00000042745	TNRC6B	99	87.031	Macaca_nemestrina
ENSPCIG00000020347	TNRC6B	99	87.713	ENSMLEG00000041780	TNRC6B	99	87.438	Mandrillus_leucophaeus
ENSPCIG00000020347	TNRC6B	99	86.296	ENSMGAG00000012333	TNRC6B	99	85.746	Meleagris_gallopavo
ENSPCIG00000020347	TNRC6B	99	85.917	ENSMAUG00000016123	Tnrc6b	97	85.633	Mesocricetus_auratus
ENSPCIG00000020347	TNRC6B	99	87.720	ENSMICG00000014056	TNRC6B	99	87.610	Microcebus_murinus
ENSPCIG00000020347	TNRC6B	96	89.000	ENSMOCG00000020334	Tnrc6b	96	89.000	Microtus_ochrogaster
ENSPCIG00000020347	TNRC6B	99	85.804	MGP_CAROLIEiJ_G0020043	Tnrc6b	97	85.690	Mus_caroli
ENSPCIG00000020347	TNRC6B	99	85.974	ENSMUSG00000047888	Tnrc6b	97	85.860	Mus_musculus
ENSPCIG00000020347	TNRC6B	99	86.080	MGP_PahariEiJ_G0020045	Tnrc6b	97	85.966	Mus_pahari
ENSPCIG00000020347	TNRC6B	99	86.469	MGP_SPRETEiJ_G0020941	Tnrc6b	97	86.359	Mus_spretus
ENSPCIG00000020347	TNRC6B	97	91.412	ENSMPUG00000016442	TNRC6B	96	91.603	Mustela_putorius_furo
ENSPCIG00000020347	TNRC6B	99	87.431	ENSMLUG00000008765	TNRC6B	99	87.045	Myotis_lucifugus
ENSPCIG00000020347	TNRC6B	99	85.933	ENSNGAG00000021294	Tnrc6b	97	85.876	Nannospalax_galili
ENSPCIG00000020347	TNRC6B	89	90.472	ENSNLEG00000015311	TNRC6B	94	91.863	Nomascus_leucogenys
ENSPCIG00000020347	TNRC6B	90	82.629	ENSOPRG00000012054	TNRC6B	87	83.152	Ochotona_princeps
ENSPCIG00000020347	TNRC6B	99	86.379	ENSODEG00000013146	TNRC6B	97	86.436	Octodon_degus
ENSPCIG00000020347	TNRC6B	69	43.804	ENSONIG00000019679	-	99	39.669	Oreochromis_niloticus
ENSPCIG00000020347	TNRC6B	99	86.340	ENSOCUG00000016128	TNRC6B	97	86.853	Oryctolagus_cuniculus
ENSPCIG00000020347	TNRC6B	99	87.342	ENSOGAG00000011096	TNRC6B	99	87.067	Otolemur_garnettii
ENSPCIG00000020347	TNRC6B	99	86.765	ENSOARG00000017238	TNRC6B	97	86.482	Ovis_aries
ENSPCIG00000020347	TNRC6B	99	87.927	ENSPPAG00000028514	TNRC6B	99	87.652	Pan_paniscus
ENSPCIG00000020347	TNRC6B	99	87.762	ENSPPRG00000017741	TNRC6B	94	92.671	Panthera_pardus
ENSPCIG00000020347	TNRC6B	99	83.725	ENSPTIG00000022064	TNRC6B	98	84.859	Panthera_tigris_altaica
ENSPCIG00000020347	TNRC6B	99	87.817	ENSPTRG00000047826	TNRC6B	99	87.486	Pan_troglodytes
ENSPCIG00000020347	TNRC6B	99	81.108	ENSPANG00000009271	TNRC6B	99	87.805	Papio_anubis
ENSPCIG00000020347	TNRC6B	99	85.423	ENSPSIG00000005318	TNRC6B	98	85.139	Pelodiscus_sinensis
ENSPCIG00000020347	TNRC6B	99	85.374	ENSPEMG00000011403	Tnrc6b	97	85.431	Peromyscus_maniculatus_bairdii
ENSPCIG00000020347	TNRC6B	69	47.652	ENSPFOG00000006033	-	53	49.706	Poecilia_formosa
ENSPCIG00000020347	TNRC6B	67	44.392	ENSPLAG00000001418	-	53	48.652	Poecilia_latipinna
ENSPCIG00000020347	TNRC6B	79	53.598	ENSPMEG00000006371	-	68	54.524	Poecilia_mexicana
ENSPCIG00000020347	TNRC6B	99	82.540	ENSPPYG00000011849	TNRC6B	100	84.558	Pongo_abelii
ENSPCIG00000020347	TNRC6B	72	83.186	ENSPCAG00000008739	TNRC6B	74	83.186	Procavia_capensis
ENSPCIG00000020347	TNRC6B	99	87.775	ENSPCOG00000020790	TNRC6B	99	87.665	Propithecus_coquereli
ENSPCIG00000020347	TNRC6B	92	82.740	ENSPVAG00000004975	TNRC6B	90	84.223	Pteropus_vampyrus
ENSPCIG00000020347	TNRC6B	66	51.055	ENSPNAG00000011713	tnrc6b	71	46.934	Pygocentrus_nattereri
ENSPCIG00000020347	TNRC6B	99	85.642	ENSRNOG00000024907	Tnrc6b	97	85.302	Rattus_norvegicus
ENSPCIG00000020347	TNRC6B	99	87.438	ENSRBIG00000035576	TNRC6B	95	91.166	Rhinopithecus_bieti
ENSPCIG00000020347	TNRC6B	99	87.383	ENSRROG00000031135	TNRC6B	99	87.107	Rhinopithecus_roxellana
ENSPCIG00000020347	TNRC6B	98	87.305	ENSSBOG00000029743	TNRC6B	96	91.745	Saimiri_boliviensis_boliviensis
ENSPCIG00000020347	TNRC6B	99	94.309	ENSSHAG00000009692	TNRC6B	99	94.530	Sarcophilus_harrisii
ENSPCIG00000020347	TNRC6B	66	95.455	ENSSARG00000007971	-	70	82.906	Sorex_araneus
ENSPCIG00000020347	TNRC6B	92	84.962	ENSSPUG00000010801	TNRC6B	100	84.192	Sphenodon_punctatus
ENSPCIG00000020347	TNRC6B	99	87.762	ENSSSCG00000000078	TNRC6B	98	87.137	Sus_scrofa
ENSPCIG00000020347	TNRC6B	93	82.006	ENSTGUG00000010138	-	99	81.428	Taeniopygia_guttata
ENSPCIG00000020347	TNRC6B	94	92.140	ENSTTRG00000011465	TNRC6B	94	92.140	Tursiops_truncatus
ENSPCIG00000020347	TNRC6B	99	86.701	ENSUAMG00000007174	TNRC6B	98	87.342	Ursus_americanus
ENSPCIG00000020347	TNRC6B	99	87.422	ENSUMAG00000014336	TNRC6B	100	86.985	Ursus_maritimus
ENSPCIG00000020347	TNRC6B	67	80.423	ENSVPAG00000001467	TNRC6B	71	80.481	Vicugna_pacos
ENSPCIG00000020347	TNRC6B	99	87.617	ENSVVUG00000007064	TNRC6B	98	87.159	Vulpes_vulpes