EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000021003 (Gene tree)
Gene ID: 110207407
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 44202 bases
Position: chrFUWB01001400.1:834516-878717
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000028119	DUF1604	PF07713.13	7.3e-36	1	1
ENSPCIP00000028117	DUF1604	PF07713.13	7.5e-36	1	1
ENSPCIP00000028119	G-patch	PF01585.23	8.6e-08	1	1
ENSPCIP00000028117	G-patch	PF01585.23	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000034590	GPATCH1-202	2761	-	ENSPCIP00000028119	872 (aa)	-	-
ENSPCIT00000034588	GPATCH1-201	3068	-	ENSPCIP00000028117	889 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000021003's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000021003's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000021003	GPATCH1	96	75.029	ENSG00000076650	GPATCH1	83	86.792	Homo_sapiens
ENSPCIG00000021003	GPATCH1	95	75.472	ENSAMEG00000015575	GPATCH1	91	75.352	Ailuropoda_melanoleuca
ENSPCIG00000021003	GPATCH1	85	69.613	ENSAOCG00000006668	gpatch1	75	69.613	Amphiprion_ocellaris
ENSPCIG00000021003	GPATCH1	85	54.054	ENSAPEG00000000026	gpatch1	90	51.247	Amphiprion_percula
ENSPCIG00000021003	GPATCH1	94	50.624	ENSATEG00000014494	gpatch1	90	51.591	Anabas_testudineus
ENSPCIG00000021003	GPATCH1	98	60.244	ENSAPLG00000007584	GPATCH1	98	60.136	Anas_platyrhynchos
ENSPCIG00000021003	GPATCH1	96	73.974	ENSANAG00000027002	GPATCH1	91	73.974	Aotus_nancymaae
ENSPCIG00000021003	GPATCH1	85	54.061	ENSACLG00000024740	gpatch1	79	53.333	Astatotilapia_calliptera
ENSPCIG00000021003	GPATCH1	96	51.616	ENSAMXG00000020177	gpatch1	98	52.438	Astyanax_mexicanus
ENSPCIG00000021003	GPATCH1	95	75.118	ENSBTAG00000000721	GPATCH1	91	75.118	Bos_taurus
ENSPCIG00000021003	GPATCH1	72	30.572	WBGene00011109	R07E5.1	68	31.050	Caenorhabditis_elegans
ENSPCIG00000021003	GPATCH1	96	74.061	ENSCJAG00000000684	GPATCH1	91	73.974	Callithrix_jacchus
ENSPCIG00000021003	GPATCH1	95	76.061	ENSCAFG00000007457	GPATCH1	77	75.939	Canis_familiaris
ENSPCIG00000021003	GPATCH1	99	74.691	ENSCAFG00020019731	GPATCH1	91	76.061	Canis_lupus_dingo
ENSPCIG00000021003	GPATCH1	95	75.354	ENSCHIG00000019626	GPATCH1	92	74.584	Capra_hircus
ENSPCIG00000021003	GPATCH1	94	69.830	ENSCAPG00000008827	GPATCH1	91	69.976	Cavia_aperea
ENSPCIG00000021003	GPATCH1	95	72.620	ENSCPOG00000024477	GPATCH1	91	72.398	Cavia_porcellus
ENSPCIG00000021003	GPATCH1	96	73.857	ENSCCAG00000024676	GPATCH1	91	73.857	Cebus_capucinus
ENSPCIG00000021003	GPATCH1	96	74.648	ENSCATG00000043637	GPATCH1	83	85.849	Cercocebus_atys
ENSPCIG00000021003	GPATCH1	96	70.987	ENSCLAG00000003395	-	92	71.810	Chinchilla_lanigera
ENSPCIG00000021003	GPATCH1	96	72.131	ENSCSAG00000004743	GPATCH1	91	72.131	Chlorocebus_sabaeus
ENSPCIG00000021003	GPATCH1	88	66.710	ENSCHOG00000012865	GPATCH1	89	66.710	Choloepus_hoffmanni
ENSPCIG00000021003	GPATCH1	89	68.041	ENSCPBG00000000666	GPATCH1	92	69.863	Chrysemys_picta_bellii
ENSPCIG00000021003	GPATCH1	71	36.294	ENSCING00000012518	-	84	34.625	Ciona_intestinalis
ENSPCIG00000021003	GPATCH1	80	82.703	ENSCANG00000012540	GPATCH1	87	82.703	Colobus_angolensis_palliatus
ENSPCIG00000021003	GPATCH1	94	69.759	ENSCGRG00001016736	Gpatch1	91	71.360	Cricetulus_griseus_chok1gshd
ENSPCIG00000021003	GPATCH1	84	63.329	ENSCGRG00000005069	Gpatch1	78	63.329	Cricetulus_griseus_crigri
ENSPCIG00000021003	GPATCH1	94	40.654	ENSCSEG00000019456	-	84	60.550	Cynoglossus_semilaevis
ENSPCIG00000021003	GPATCH1	95	51.799	ENSDARG00000033418	gpatch1	92	52.678	Danio_rerio
ENSPCIG00000021003	GPATCH1	95	74.323	ENSDNOG00000005291	GPATCH1	95	74.209	Dasypus_novemcinctus
ENSPCIG00000021003	GPATCH1	99	67.269	ENSDORG00000012546	Gpatch1	95	68.427	Dipodomys_ordii
ENSPCIG00000021003	GPATCH1	86	31.356	FBgn0036386	CG8833	67	33.663	Drosophila_melanogaster
ENSPCIG00000021003	GPATCH1	96	66.706	ENSETEG00000003626	GPATCH1	92	66.706	Echinops_telfairi
ENSPCIG00000021003	GPATCH1	99	35.059	ENSEBUG00000011286	gpatch1	91	35.909	Eptatretus_burgeri
ENSPCIG00000021003	GPATCH1	95	74.201	ENSEASG00005021162	GPATCH1	93	75.187	Equus_asinus_asinus
ENSPCIG00000021003	GPATCH1	95	75.118	ENSECAG00000022743	GPATCH1	88	75.000	Equus_caballus
ENSPCIG00000021003	GPATCH1	81	75.980	ENSEEUG00000012925	GPATCH1	78	75.980	Erinaceus_europaeus
ENSPCIG00000021003	GPATCH1	95	48.148	ENSELUG00000018195	gpatch1	90	48.869	Esox_lucius
ENSPCIG00000021003	GPATCH1	95	74.764	ENSFCAG00000014917	GPATCH1	91	74.648	Felis_catus
ENSPCIG00000021003	GPATCH1	98	60.067	ENSFALG00000007821	GPATCH1	91	61.921	Ficedula_albicollis
ENSPCIG00000021003	GPATCH1	95	71.913	ENSFDAG00000003871	GPATCH1	92	71.792	Fukomys_damarensis
ENSPCIG00000021003	GPATCH1	85	46.073	ENSGMOG00000003830	gpatch1	95	43.735	Gadus_morhua
ENSPCIG00000021003	GPATCH1	98	63.254	ENSGALG00000004839	GPATCH1	94	63.066	Gallus_gallus
ENSPCIG00000021003	GPATCH1	94	49.767	ENSGACG00000017544	gpatch1	93	49.767	Gasterosteus_aculeatus
ENSPCIG00000021003	GPATCH1	96	67.703	ENSGAGG00000010067	GPATCH1	92	66.899	Gopherus_agassizii
ENSPCIG00000021003	GPATCH1	95	74.517	ENSGGOG00000010862	GPATCH1	91	74.517	Gorilla_gorilla
ENSPCIG00000021003	GPATCH1	85	53.895	ENSHBUG00000023462	gpatch1	90	51.532	Haplochromis_burtoni
ENSPCIG00000021003	GPATCH1	95	72.706	ENSHGLG00000009334	GPATCH1	91	72.482	Heterocephalus_glaber_female
ENSPCIG00000021003	GPATCH1	95	72.824	ENSHGLG00100018074	GPATCH1	91	72.600	Heterocephalus_glaber_male
ENSPCIG00000021003	GPATCH1	98	50.709	ENSIPUG00000014977	gpatch1	90	52.397	Ictalurus_punctatus
ENSPCIG00000021003	GPATCH1	95	74.323	ENSSTOG00000003720	GPATCH1	91	74.209	Ictidomys_tridecemlineatus
ENSPCIG00000021003	GPATCH1	95	72.170	ENSJJAG00000023765	Gpatch1	91	72.170	Jaculus_jaculus
ENSPCIG00000021003	GPATCH1	94	50.524	ENSKMAG00000017950	gpatch1	89	50.987	Kryptolebias_marmoratus
ENSPCIG00000021003	GPATCH1	85	51.066	ENSLBEG00000026527	gpatch1	88	49.888	Labrus_bergylta
ENSPCIG00000021003	GPATCH1	94	57.109	ENSLACG00000008130	GPATCH1	90	57.399	Latimeria_chalumnae
ENSPCIG00000021003	GPATCH1	85	57.662	ENSLOCG00000001800	gpatch1	90	54.895	Lepisosteus_oculatus
ENSPCIG00000021003	GPATCH1	96	74.765	ENSLAFG00000013589	GPATCH1	94	74.275	Loxodonta_africana
ENSPCIG00000021003	GPATCH1	95	74.377	ENSMFAG00000034418	GPATCH1	95	74.377	Macaca_fascicularis
ENSPCIG00000021003	GPATCH1	96	74.473	ENSMMUG00000011790	GPATCH1	83	85.849	Macaca_mulatta
ENSPCIG00000021003	GPATCH1	96	74.091	ENSMNEG00000045084	GPATCH1	91	74.091	Macaca_nemestrina
ENSPCIG00000021003	GPATCH1	96	63.146	ENSMLEG00000043840	GPATCH1	88	66.115	Mandrillus_leucophaeus
ENSPCIG00000021003	GPATCH1	85	53.934	ENSMZEG00005001926	gpatch1	80	53.208	Maylandia_zebra
ENSPCIG00000021003	GPATCH1	94	64.720	ENSMGAG00000005775	GPATCH1	91	63.220	Meleagris_gallopavo
ENSPCIG00000021003	GPATCH1	95	65.960	ENSMICG00000004829	GPATCH1	93	66.431	Microcebus_murinus
ENSPCIG00000021003	GPATCH1	95	71.846	ENSMOCG00000000174	Gpatch1	92	71.744	Microtus_ochrogaster
ENSPCIG00000021003	GPATCH1	85	51.139	ENSMMOG00000002140	gpatch1	87	52.020	Mola_mola
ENSPCIG00000021003	GPATCH1	97	89.419	ENSMODG00000012226	GPATCH1	91	89.406	Monodelphis_domestica
ENSPCIG00000021003	GPATCH1	85	51.580	ENSMALG00000014386	gpatch1	90	50.458	Monopterus_albus
ENSPCIG00000021003	GPATCH1	98	71.266	ENSMUSG00000063808	Gpatch1	100	86.735	Mus_musculus
ENSPCIG00000021003	GPATCH1	98	70.529	MGP_PahariEiJ_G0012816	Gpatch1	100	87.755	Mus_pahari
ENSPCIG00000021003	GPATCH1	98	69.669	MGP_SPRETEiJ_G0030681	Gpatch1	100	87.755	Mus_spretus
ENSPCIG00000021003	GPATCH1	95	75.825	ENSMPUG00000007658	GPATCH1	91	75.704	Mustela_putorius_furo
ENSPCIG00000021003	GPATCH1	95	75.000	ENSMLUG00000012161	GPATCH1	91	74.883	Myotis_lucifugus
ENSPCIG00000021003	GPATCH1	95	72.642	ENSNGAG00000012455	Gpatch1	92	72.268	Nannospalax_galili
ENSPCIG00000021003	GPATCH1	96	74.590	ENSNLEG00000007659	GPATCH1	83	86.792	Nomascus_leucogenys
ENSPCIG00000021003	GPATCH1	82	81.446	ENSMEUG00000015174	GPATCH1	79	81.446	Notamacropus_eugenii
ENSPCIG00000021003	GPATCH1	95	69.977	ENSODEG00000007103	GPATCH1	92	69.767	Octodon_degus
ENSPCIG00000021003	GPATCH1	85	54.780	ENSONIG00000003302	gpatch1	91	53.216	Oreochromis_niloticus
ENSPCIG00000021003	GPATCH1	98	72.842	ENSOANG00000012732	GPATCH1	91	72.941	Ornithorhynchus_anatinus
ENSPCIG00000021003	GPATCH1	95	75.000	ENSOCUG00000015905	GPATCH1	91	74.883	Oryctolagus_cuniculus
ENSPCIG00000021003	GPATCH1	94	49.592	ENSORLG00000018706	gpatch1	88	49.765	Oryzias_latipes
ENSPCIG00000021003	GPATCH1	98	48.556	ENSOMEG00000022688	gpatch1	95	48.840	Oryzias_melastigma
ENSPCIG00000021003	GPATCH1	88	75.191	ENSOGAG00000004016	GPATCH1	96	76.153	Otolemur_garnettii
ENSPCIG00000021003	GPATCH1	94	74.911	ENSOARG00000004365	GPATCH1	90	74.911	Ovis_aries
ENSPCIG00000021003	GPATCH1	96	75.029	ENSPPAG00000020990	GPATCH1	83	85.981	Pan_paniscus
ENSPCIG00000021003	GPATCH1	96	74.648	ENSPPRG00000017245	GPATCH1	91	74.648	Panthera_pardus
ENSPCIG00000021003	GPATCH1	96	75.469	ENSPTIG00000019649	GPATCH1	91	75.469	Panthera_tigris_altaica
ENSPCIG00000021003	GPATCH1	96	74.912	ENSPTRG00000010803	GPATCH1	83	86.792	Pan_troglodytes
ENSPCIG00000021003	GPATCH1	96	74.296	ENSPANG00000012374	GPATCH1	96	74.296	Papio_anubis
ENSPCIG00000021003	GPATCH1	85	55.513	ENSPKIG00000020745	gpatch1	77	56.739	Paramormyrops_kingsleyae
ENSPCIG00000021003	GPATCH1	96	64.685	ENSPSIG00000013433	GPATCH1	90	65.100	Pelodiscus_sinensis
ENSPCIG00000021003	GPATCH1	96	72.398	ENSPEMG00000000636	Gpatch1	91	72.398	Peromyscus_maniculatus_bairdii
ENSPCIG00000021003	GPATCH1	74	49.705	ENSPREG00000008264	gpatch1	79	49.853	Poecilia_reticulata
ENSPCIG00000021003	GPATCH1	96	72.216	ENSPPYG00000009824	GPATCH1	91	72.216	Pongo_abelii
ENSPCIG00000021003	GPATCH1	80	77.857	ENSPCAG00000005931	GPATCH1	76	78.276	Procavia_capensis
ENSPCIG00000021003	GPATCH1	95	70.637	ENSPCOG00000009674	GPATCH1	96	68.978	Propithecus_coquereli
ENSPCIG00000021003	GPATCH1	87	75.676	ENSPVAG00000017767	GPATCH1	83	74.079	Pteropus_vampyrus
ENSPCIG00000021003	GPATCH1	85	54.359	ENSPNYG00000018189	gpatch1	89	54.198	Pundamilia_nyererei
ENSPCIG00000021003	GPATCH1	95	52.345	ENSPNAG00000013187	gpatch1	92	52.609	Pygocentrus_nattereri
ENSPCIG00000021003	GPATCH1	98	70.295	ENSRNOG00000011584	Gpatch1	91	72.792	Rattus_norvegicus
ENSPCIG00000021003	GPATCH1	95	67.568	ENSRBIG00000034723	GPATCH1	92	67.450	Rhinopithecus_bieti
ENSPCIG00000021003	GPATCH1	96	74.356	ENSRROG00000024428	GPATCH1	83	84.906	Rhinopithecus_roxellana
ENSPCIG00000021003	GPATCH1	96	74.443	ENSSBOG00000034650	GPATCH1	91	74.443	Saimiri_boliviensis_boliviensis
ENSPCIG00000021003	GPATCH1	97	91.851	ENSSHAG00000016016	GPATCH1	91	92.084	Sarcophilus_harrisii
ENSPCIG00000021003	GPATCH1	85	57.379	ENSSFOG00015011535	gpatch1	89	55.708	Scleropages_formosus
ENSPCIG00000021003	GPATCH1	80	54.440	ENSSMAG00000002883	gpatch1	97	46.384	Scophthalmus_maximus
ENSPCIG00000021003	GPATCH1	85	52.304	ENSSDUG00000007444	gpatch1	90	51.114	Seriola_dumerili
ENSPCIG00000021003	GPATCH1	85	52.233	ENSSLDG00000002856	gpatch1	89	53.000	Seriola_lalandi_dorsalis
ENSPCIG00000021003	GPATCH1	76	78.274	ENSSARG00000004108	GPATCH1	72	78.274	Sorex_araneus
ENSPCIG00000021003	GPATCH1	95	75.825	ENSSSCG00000002865	GPATCH1	94	75.825	Sus_scrofa
ENSPCIG00000021003	GPATCH1	95	60.905	ENSTGUG00000009401	GPATCH1	92	62.544	Taeniopygia_guttata
ENSPCIG00000021003	GPATCH1	85	51.355	ENSTRUG00000005785	-	90	50.583	Takifugu_rubripes
ENSPCIG00000021003	GPATCH1	85	51.355	ENSTRUG00000025081	gpatch1	90	50.583	Takifugu_rubripes
ENSPCIG00000021003	GPATCH1	85	51.139	ENSTNIG00000002554	gpatch1	97	52.503	Tetraodon_nigroviridis
ENSPCIG00000021003	GPATCH1	68	64.804	ENSTBEG00000007750	-	84	64.804	Tupaia_belangeri
ENSPCIG00000021003	GPATCH1	95	66.863	ENSTTRG00000012221	GPATCH1	91	66.863	Tursiops_truncatus
ENSPCIG00000021003	GPATCH1	95	75.297	ENSUMAG00000014645	GPATCH1	96	75.935	Ursus_maritimus
ENSPCIG00000021003	GPATCH1	83	89.143	ENSVPAG00000010313	GPATCH1	86	89.130	Vicugna_pacos
ENSPCIG00000021003	GPATCH1	99	74.578	ENSVVUG00000016572	GPATCH1	91	75.943	Vulpes_vulpes
ENSPCIG00000021003	GPATCH1	94	53.099	ENSXETG00000018276	gpatch1	94	55.364	Xenopus_tropicalis