EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000021467 (Gene tree)
Gene ID: 110200667
Gene Symbol: LSM8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 29219 bases
Position: chrFUWB01001502.1:1179791-1209009
Accession: 20471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000028741	LSM	PF01423.22	3.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000035397	LSM8-201	649	-	ENSPCIP00000028741	95 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000021467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000021467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000021467	LSM8	93	34.091	ENSPCIG00000008880	LSM1	65	34.091
ENSPCIG00000021467	LSM8	74	35.526	ENSPCIG00000030454	LSM7	73	35.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000021467	LSM8	98	100.000	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSPCIG00000021467	LSM8	98	93.548	ENSAPOG00000008649	lsm8	97	93.548	Acanthochromis_polyacanthus
ENSPCIG00000021467	LSM8	98	100.000	ENSAMEG00000001162	LSM8	97	100.000	Ailuropoda_melanoleuca
ENSPCIG00000021467	LSM8	76	98.611	ENSACIG00000014694	lsm8	96	98.611	Amphilophus_citrinellus
ENSPCIG00000021467	LSM8	98	93.548	ENSAOCG00000013926	lsm8	97	93.548	Amphiprion_ocellaris
ENSPCIG00000021467	LSM8	98	93.548	ENSAPEG00000023502	lsm8	97	93.548	Amphiprion_percula
ENSPCIG00000021467	LSM8	76	98.611	ENSATEG00000023432	lsm8	96	98.611	Anabas_testudineus
ENSPCIG00000021467	LSM8	93	92.308	ENSAPLG00000005115	LSM8	92	92.308	Anas_platyrhynchos
ENSPCIG00000021467	LSM8	98	100.000	ENSANAG00000027771	LSM8	97	100.000	Aotus_nancymaae
ENSPCIG00000021467	LSM8	98	93.548	ENSACLG00000011253	lsm8	97	93.548	Astatotilapia_calliptera
ENSPCIG00000021467	LSM8	98	95.699	ENSAMXG00000042902	lsm8	97	95.699	Astyanax_mexicanus
ENSPCIG00000021467	LSM8	98	100.000	ENSBTAG00000012649	LSM8	97	100.000	Bos_taurus
ENSPCIG00000021467	LSM8	96	60.440	WBGene00003082	lsm-8	93	60.440	Caenorhabditis_elegans
ENSPCIG00000021467	LSM8	98	100.000	ENSCJAG00000046406	LSM8	97	100.000	Callithrix_jacchus
ENSPCIG00000021467	LSM8	98	100.000	ENSCAFG00000016459	LSM8	94	100.000	Canis_familiaris
ENSPCIG00000021467	LSM8	89	98.824	ENSCAFG00020012800	-	66	98.824	Canis_lupus_dingo
ENSPCIG00000021467	LSM8	98	100.000	ENSCAFG00020007643	-	97	100.000	Canis_lupus_dingo
ENSPCIG00000021467	LSM8	86	100.000	ENSCHIG00000014201	LSM8	87	100.000	Capra_hircus
ENSPCIG00000021467	LSM8	98	100.000	ENSTSYG00000032434	LSM8	97	100.000	Carlito_syrichta
ENSPCIG00000021467	LSM8	75	98.592	ENSCAPG00000008253	LSM8	96	98.592	Cavia_aperea
ENSPCIG00000021467	LSM8	98	100.000	ENSCPOG00000035673	LSM8	97	100.000	Cavia_porcellus
ENSPCIG00000021467	LSM8	98	100.000	ENSCCAG00000021329	LSM8	97	100.000	Cebus_capucinus
ENSPCIG00000021467	LSM8	98	100.000	ENSCATG00000045302	LSM8	97	100.000	Cercocebus_atys
ENSPCIG00000021467	LSM8	98	100.000	ENSCLAG00000003726	LSM8	97	100.000	Chinchilla_lanigera
ENSPCIG00000021467	LSM8	98	100.000	ENSCSAG00000010802	-	97	100.000	Chlorocebus_sabaeus
ENSPCIG00000021467	LSM8	98	95.699	ENSCSAG00000019007	-	97	95.699	Chlorocebus_sabaeus
ENSPCIG00000021467	LSM8	86	100.000	ENSCPBG00000008154	LSM8	84	100.000	Chrysemys_picta_bellii
ENSPCIG00000021467	LSM8	98	75.269	ENSCING00000024877	-	97	75.269	Ciona_intestinalis
ENSPCIG00000021467	LSM8	98	100.000	ENSCANG00000040728	LSM8	97	100.000	Colobus_angolensis_palliatus
ENSPCIG00000021467	LSM8	98	100.000	ENSCGRG00001000450	Lsm8	97	100.000	Cricetulus_griseus_chok1gshd
ENSPCIG00000021467	LSM8	86	100.000	ENSCGRG00000005587	Lsm8	96	100.000	Cricetulus_griseus_crigri
ENSPCIG00000021467	LSM8	98	81.720	ENSCSEG00000004164	lsm8	97	81.720	Cynoglossus_semilaevis
ENSPCIG00000021467	LSM8	98	92.473	ENSCVAG00000020547	lsm8	97	92.473	Cyprinodon_variegatus
ENSPCIG00000021467	LSM8	98	92.473	ENSDARG00000091656	lsm8	97	92.473	Danio_rerio
ENSPCIG00000021467	LSM8	98	100.000	ENSDNOG00000034613	LSM8	97	100.000	Dasypus_novemcinctus
ENSPCIG00000021467	LSM8	98	100.000	ENSDORG00000027868	Lsm8	97	100.000	Dipodomys_ordii
ENSPCIG00000021467	LSM8	94	70.787	FBgn0035271	CG2021	94	70.787	Drosophila_melanogaster
ENSPCIG00000021467	LSM8	98	100.000	ENSETEG00000011594	LSM8	97	100.000	Echinops_telfairi
ENSPCIG00000021467	LSM8	75	92.958	ENSEBUG00000012017	lsm8	96	92.958	Eptatretus_burgeri
ENSPCIG00000021467	LSM8	98	100.000	ENSEASG00005008932	LSM8	60	100.000	Equus_asinus_asinus
ENSPCIG00000021467	LSM8	86	100.000	ENSECAG00000024025	LSM8	75	100.000	Equus_caballus
ENSPCIG00000021467	LSM8	98	93.548	ENSELUG00000010138	lsm8	97	93.548	Esox_lucius
ENSPCIG00000021467	LSM8	98	100.000	ENSFCAG00000036620	-	97	100.000	Felis_catus
ENSPCIG00000021467	LSM8	86	74.390	ENSFCAG00000044794	-	83	74.390	Felis_catus
ENSPCIG00000021467	LSM8	98	100.000	ENSFALG00000010023	LSM8	97	100.000	Ficedula_albicollis
ENSPCIG00000021467	LSM8	98	100.000	ENSFDAG00000019530	LSM8	97	100.000	Fukomys_damarensis
ENSPCIG00000021467	LSM8	98	93.548	ENSFHEG00000013729	lsm8	97	93.548	Fundulus_heteroclitus
ENSPCIG00000021467	LSM8	98	100.000	ENSGALG00000009110	LSM8	97	100.000	Gallus_gallus
ENSPCIG00000021467	LSM8	98	92.473	ENSGAFG00000001135	lsm8	97	92.473	Gambusia_affinis
ENSPCIG00000021467	LSM8	98	100.000	ENSGAGG00000017366	LSM8	97	100.000	Gopherus_agassizii
ENSPCIG00000021467	LSM8	98	100.000	ENSGGOG00000041883	LSM8	97	100.000	Gorilla_gorilla
ENSPCIG00000021467	LSM8	98	93.548	ENSHBUG00000003646	lsm8	97	93.548	Haplochromis_burtoni
ENSPCIG00000021467	LSM8	98	94.624	ENSHGLG00000019782	-	97	94.624	Heterocephalus_glaber_female
ENSPCIG00000021467	LSM8	72	100.000	ENSHGLG00000001988	-	99	100.000	Heterocephalus_glaber_female
ENSPCIG00000021467	LSM8	98	95.699	ENSHGLG00100012166	-	97	95.699	Heterocephalus_glaber_male
ENSPCIG00000021467	LSM8	97	98.913	ENSHGLG00100003934	-	92	98.913	Heterocephalus_glaber_male
ENSPCIG00000021467	LSM8	98	92.473	ENSHCOG00000005037	lsm8	97	92.473	Hippocampus_comes
ENSPCIG00000021467	LSM8	98	95.699	ENSIPUG00000019811	NAA38	97	95.699	Ictalurus_punctatus
ENSPCIG00000021467	LSM8	87	89.157	ENSSTOG00000034801	-	77	89.157	Ictidomys_tridecemlineatus
ENSPCIG00000021467	LSM8	98	100.000	ENSSTOG00000009039	LSM8	97	100.000	Ictidomys_tridecemlineatus
ENSPCIG00000021467	LSM8	98	100.000	ENSJJAG00000009031	Lsm8	96	100.000	Jaculus_jaculus
ENSPCIG00000021467	LSM8	98	93.548	ENSKMAG00000018983	lsm8	97	93.548	Kryptolebias_marmoratus
ENSPCIG00000021467	LSM8	98	95.699	ENSLACG00000010231	LSM8	97	95.699	Latimeria_chalumnae
ENSPCIG00000021467	LSM8	98	94.624	ENSLOCG00000015580	lsm8	97	94.624	Lepisosteus_oculatus
ENSPCIG00000021467	LSM8	98	98.936	ENSLAFG00000011242	LSM8	97	98.936	Loxodonta_africana
ENSPCIG00000021467	LSM8	98	100.000	ENSMFAG00000035798	LSM8	97	100.000	Macaca_fascicularis
ENSPCIG00000021467	LSM8	98	95.699	ENSMFAG00000013044	-	97	95.699	Macaca_fascicularis
ENSPCIG00000021467	LSM8	98	100.000	ENSMMUG00000046401	LSM8	96	97.183	Macaca_mulatta
ENSPCIG00000021467	LSM8	98	100.000	ENSMNEG00000036764	-	97	100.000	Macaca_nemestrina
ENSPCIG00000021467	LSM8	76	95.833	ENSMNEG00000011141	-	96	95.833	Macaca_nemestrina
ENSPCIG00000021467	LSM8	98	100.000	ENSMLEG00000035828	-	97	100.000	Mandrillus_leucophaeus
ENSPCIG00000021467	LSM8	98	84.946	ENSMLEG00000039324	-	97	84.946	Mandrillus_leucophaeus
ENSPCIG00000021467	LSM8	76	98.611	ENSMAMG00000018839	lsm8	96	98.611	Mastacembelus_armatus
ENSPCIG00000021467	LSM8	98	93.548	ENSMZEG00005019138	lsm8	97	93.548	Maylandia_zebra
ENSPCIG00000021467	LSM8	98	100.000	ENSMGAG00000008808	LSM8	97	100.000	Meleagris_gallopavo
ENSPCIG00000021467	LSM8	73	94.203	ENSMAUG00000020287	-	96	91.549	Mesocricetus_auratus
ENSPCIG00000021467	LSM8	94	97.753	ENSMAUG00000015721	-	94	97.753	Mesocricetus_auratus
ENSPCIG00000021467	LSM8	98	80.645	ENSMAUG00000015356	-	96	80.645	Mesocricetus_auratus
ENSPCIG00000021467	LSM8	98	100.000	ENSMICG00000042730	LSM8	97	100.000	Microcebus_murinus
ENSPCIG00000021467	LSM8	98	100.000	ENSMOCG00000001688	Lsm8	97	100.000	Microtus_ochrogaster
ENSPCIG00000021467	LSM8	76	98.611	ENSMMOG00000006046	lsm8	96	98.611	Mola_mola
ENSPCIG00000021467	LSM8	75	89.041	ENSMODG00000015729	LSM8	94	89.041	Monodelphis_domestica
ENSPCIG00000021467	LSM8	98	94.624	ENSMALG00000000405	lsm8	97	94.624	Monopterus_albus
ENSPCIG00000021467	LSM8	98	100.000	MGP_CAROLIEiJ_G0028125	-	97	100.000	Mus_caroli
ENSPCIG00000021467	LSM8	98	100.000	ENSMUSG00000044155	Lsm8	97	100.000	Mus_musculus
ENSPCIG00000021467	LSM8	98	100.000	MGP_PahariEiJ_G0021881	Lsm8	97	100.000	Mus_pahari
ENSPCIG00000021467	LSM8	98	100.000	MGP_SPRETEiJ_G0029125	-	97	100.000	Mus_spretus
ENSPCIG00000021467	LSM8	98	98.925	ENSMLUG00000027762	-	97	98.925	Myotis_lucifugus
ENSPCIG00000021467	LSM8	98	100.000	ENSMLUG00000006837	-	97	100.000	Myotis_lucifugus
ENSPCIG00000021467	LSM8	98	100.000	ENSNGAG00000016554	Lsm8	97	100.000	Nannospalax_galili
ENSPCIG00000021467	LSM8	98	93.548	ENSNBRG00000014441	lsm8	97	93.548	Neolamprologus_brichardi
ENSPCIG00000021467	LSM8	98	100.000	ENSNLEG00000011768	LSM8	97	100.000	Nomascus_leucogenys
ENSPCIG00000021467	LSM8	98	88.172	ENSMEUG00000007801	LSM8	97	88.172	Notamacropus_eugenii
ENSPCIG00000021467	LSM8	86	100.000	ENSOPRG00000014809	LSM8	96	100.000	Ochotona_princeps
ENSPCIG00000021467	LSM8	98	100.000	ENSODEG00000000418	-	97	100.000	Octodon_degus
ENSPCIG00000021467	LSM8	91	82.558	ENSODEG00000020290	-	100	82.558	Octodon_degus
ENSPCIG00000021467	LSM8	98	98.925	ENSOANG00000014536	LSM8	97	98.925	Ornithorhynchus_anatinus
ENSPCIG00000021467	LSM8	98	98.936	ENSOCUG00000017359	LSM8	97	98.936	Oryctolagus_cuniculus
ENSPCIG00000021467	LSM8	98	82.796	ENSORLG00000017432	lsm8	97	82.796	Oryzias_latipes
ENSPCIG00000021467	LSM8	98	82.796	ENSORLG00020004376	lsm8	97	82.796	Oryzias_latipes_hni
ENSPCIG00000021467	LSM8	98	93.548	ENSORLG00015003757	lsm8	97	93.548	Oryzias_latipes_hsok
ENSPCIG00000021467	LSM8	98	80.645	ENSOMEG00000022509	lsm8	97	81.720	Oryzias_melastigma
ENSPCIG00000021467	LSM8	98	100.000	ENSOGAG00000013377	LSM8	97	100.000	Otolemur_garnettii
ENSPCIG00000021467	LSM8	98	100.000	ENSOARG00000017974	LSM8	97	100.000	Ovis_aries
ENSPCIG00000021467	LSM8	76	100.000	ENSPPAG00000043228	-	96	100.000	Pan_paniscus
ENSPCIG00000021467	LSM8	98	100.000	ENSPPRG00000006444	LSM8	97	100.000	Panthera_pardus
ENSPCIG00000021467	LSM8	98	100.000	ENSPTIG00000004722	LSM8	97	100.000	Panthera_tigris_altaica
ENSPCIG00000021467	LSM8	76	100.000	ENSPTRG00000046596	-	96	100.000	Pan_troglodytes
ENSPCIG00000021467	LSM8	98	100.000	ENSPANG00000035470	-	97	100.000	Papio_anubis
ENSPCIG00000021467	LSM8	98	94.624	ENSPANG00000019395	-	97	94.624	Papio_anubis
ENSPCIG00000021467	LSM8	86	98.780	ENSPKIG00000006092	lsm8	83	98.780	Paramormyrops_kingsleyae
ENSPCIG00000021467	LSM8	76	100.000	ENSPSIG00000017054	LSM8	96	100.000	Pelodiscus_sinensis
ENSPCIG00000021467	LSM8	76	98.611	ENSPMGG00000016442	lsm8	96	98.611	Periophthalmus_magnuspinnatus
ENSPCIG00000021467	LSM8	75	97.183	ENSPEMG00000009153	Lsm8	96	97.183	Peromyscus_maniculatus_bairdii
ENSPCIG00000021467	LSM8	98	92.473	ENSPFOG00000012340	lsm8	97	92.473	Poecilia_formosa
ENSPCIG00000021467	LSM8	98	86.022	ENSPLAG00000000516	lsm8	97	86.022	Poecilia_latipinna
ENSPCIG00000021467	LSM8	98	92.473	ENSPMEG00000022567	lsm8	97	92.473	Poecilia_mexicana
ENSPCIG00000021467	LSM8	74	85.714	ENSPREG00000005527	lsm8	69	85.714	Poecilia_reticulata
ENSPCIG00000021467	LSM8	98	100.000	ENSPPYG00000017942	LSM8	97	100.000	Pongo_abelii
ENSPCIG00000021467	LSM8	98	78.495	ENSPCOG00000017982	-	97	78.495	Propithecus_coquereli
ENSPCIG00000021467	LSM8	98	100.000	ENSPCOG00000003309	-	97	100.000	Propithecus_coquereli
ENSPCIG00000021467	LSM8	86	98.780	ENSPVAG00000000990	LSM8	96	98.780	Pteropus_vampyrus
ENSPCIG00000021467	LSM8	98	93.548	ENSPNYG00000011448	lsm8	97	93.548	Pundamilia_nyererei
ENSPCIG00000021467	LSM8	98	95.699	ENSPNAG00000010252	lsm8	97	95.699	Pygocentrus_nattereri
ENSPCIG00000021467	LSM8	98	100.000	ENSRNOG00000058677	Lsm8	97	100.000	Rattus_norvegicus
ENSPCIG00000021467	LSM8	98	100.000	ENSRBIG00000032851	LSM8	97	100.000	Rhinopithecus_bieti
ENSPCIG00000021467	LSM8	98	100.000	ENSRROG00000039618	LSM8	97	100.000	Rhinopithecus_roxellana
ENSPCIG00000021467	LSM8	98	100.000	ENSSBOG00000023223	LSM8	97	100.000	Saimiri_boliviensis_boliviensis
ENSPCIG00000021467	LSM8	98	100.000	ENSSHAG00000018435	-	97	100.000	Sarcophilus_harrisii
ENSPCIG00000021467	LSM8	98	92.473	ENSSFOG00015004412	lsm8	97	92.473	Scleropages_formosus
ENSPCIG00000021467	LSM8	76	97.222	ENSSMAG00000009458	lsm8	96	97.222	Scophthalmus_maximus
ENSPCIG00000021467	LSM8	98	93.548	ENSSDUG00000014702	lsm8	97	93.548	Seriola_dumerili
ENSPCIG00000021467	LSM8	76	98.611	ENSSLDG00000016870	lsm8	96	98.611	Seriola_lalandi_dorsalis
ENSPCIG00000021467	LSM8	73	100.000	ENSSARG00000009628	-	96	100.000	Sorex_araneus
ENSPCIG00000021467	LSM8	98	100.000	ENSSPUG00000017419	LSM8	97	100.000	Sphenodon_punctatus
ENSPCIG00000021467	LSM8	98	93.548	ENSSPAG00000021422	lsm8	97	93.548	Stegastes_partitus
ENSPCIG00000021467	LSM8	98	100.000	ENSSSCG00000021652	LSM8	97	100.000	Sus_scrofa
ENSPCIG00000021467	LSM8	98	98.925	ENSTGUG00000004730	-	97	98.925	Taeniopygia_guttata
ENSPCIG00000021467	LSM8	98	97.849	ENSTGUG00000016823	-	97	97.849	Taeniopygia_guttata
ENSPCIG00000021467	LSM8	98	93.548	ENSTRUG00000025192	lsm8	97	93.548	Takifugu_rubripes
ENSPCIG00000021467	LSM8	98	93.548	ENSTNIG00000002864	lsm8	97	93.548	Tetraodon_nigroviridis
ENSPCIG00000021467	LSM8	98	100.000	ENSTTRG00000001023	LSM8	97	100.000	Tursiops_truncatus
ENSPCIG00000021467	LSM8	89	96.471	ENSUAMG00000006943	-	89	96.471	Ursus_americanus
ENSPCIG00000021467	LSM8	89	96.471	ENSUMAG00000003073	LSM8	90	96.471	Ursus_maritimus
ENSPCIG00000021467	LSM8	98	100.000	ENSVPAG00000001530	LSM8	97	100.000	Vicugna_pacos
ENSPCIG00000021467	LSM8	76	97.222	ENSVVUG00000013248	-	79	97.222	Vulpes_vulpes
ENSPCIG00000021467	LSM8	91	98.837	ENSXETG00000021829	lsm8	89	98.837	Xenopus_tropicalis
ENSPCIG00000021467	LSM8	98	90.323	ENSXCOG00000012938	lsm8	97	90.323	Xiphophorus_couchianus
ENSPCIG00000021467	LSM8	98	92.473	ENSXMAG00000025919	lsm8	97	92.473	Xiphophorus_maculatus