EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000021558 (Gene tree)
Gene ID: 110198088
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 25509 bases
Position: chrFUWB01001828.1:125327-150835
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000028908	MMR_HSR1	PF01926.23	4.3e-05	1	1
ENSPCIP00000028909	MMR_HSR1	PF01926.23	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000035578	-	1640	-	ENSPCIP00000028909	289 (aa)	-	-
ENSPCIT00000035575	-	1678	-	ENSPCIP00000028908	289 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000021558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000021558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000021558	-	56	33.951	ENSPCIG00000022594	NRAS	85	33.951
ENSPCIG00000021558	-	63	41.304	ENSPCIG00000018951	RAB25	85	41.304
ENSPCIG00000021558	-	69	35.784	ENSPCIG00000017722	RAB3D	93	35.784
ENSPCIG00000021558	-	54	37.342	ENSPCIG00000003392	RHEB	89	37.342
ENSPCIG00000021558	-	56	37.576	ENSPCIG00000029333	RAB39B	77	37.576
ENSPCIG00000021558	-	53	34.375	ENSPCIG00000015312	RAB33A	66	34.375
ENSPCIG00000021558	-	58	38.824	ENSPCIG00000023212	RAB1A	81	39.521
ENSPCIG00000021558	-	54	35.256	ENSPCIG00000007267	RAB23	70	36.310
ENSPCIG00000021558	-	64	36.316	ENSPCIG00000027547	RAB30	82	37.158
ENSPCIG00000021558	-	55	32.515	ENSPCIG00000006467	MRAS	84	30.726
ENSPCIG00000021558	-	69	36.453	ENSPCIG00000004450	-	89	36.634
ENSPCIG00000021558	-	53	30.818	ENSPCIG00000025239	DNAJC27	58	30.818
ENSPCIG00000021558	-	57	40.120	ENSPCIG00000008407	RAB1B	83	40.120
ENSPCIG00000021558	-	60	38.636	ENSPCIG00000022399	-	75	38.554
ENSPCIG00000021558	-	56	33.333	ENSPCIG00000008359	HRAS	85	33.333
ENSPCIG00000021558	-	56	34.731	ENSPCIG00000027078	RAB33B	75	34.731
ENSPCIG00000021558	-	66	34.872	ENSPCIG00000028346	RAB15	92	34.872
ENSPCIG00000021558	-	56	40.123	ENSPCIG00000010292	-	77	40.123
ENSPCIG00000021558	-	64	50.000	ENSPCIG00000020225	-	86	50.000
ENSPCIG00000021558	-	65	37.895	ENSPCIG00000029350	-	95	37.113
ENSPCIG00000021558	-	60	33.708	ENSPCIG00000000237	RAB7A	86	33.708
ENSPCIG00000021558	-	72	39.437	ENSPCIG00000006878	RAB11A	94	38.208
ENSPCIG00000021558	-	56	43.210	ENSPCIG00000004714	RAB22A	83	43.210
ENSPCIG00000021558	-	70	35.426	ENSPCIG00000000024	-	95	35.426
ENSPCIG00000021558	-	60	38.202	ENSPCIG00000020415	RAB9B	88	38.202
ENSPCIG00000021558	-	56	44.512	ENSPCIG00000020371	-	76	44.512
ENSPCIG00000021558	-	59	41.520	ENSPCIG00000021943	RAB2B	83	41.520
ENSPCIG00000021558	-	63	50.543	ENSPCIG00000018321	RAB5A	85	50.543
ENSPCIG00000021558	-	57	41.566	ENSPCIG00000009235	RAB14	77	41.566
ENSPCIG00000021558	-	59	39.888	ENSPCIG00000028705	-	76	39.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000021558	-	64	48.663	ENSACIG00000006949	RAB17	82	48.663	Amphilophus_citrinellus
ENSPCIG00000021558	-	66	48.718	ENSAOCG00000009167	-	82	49.198	Amphiprion_ocellaris
ENSPCIG00000021558	-	66	48.718	ENSAPEG00000002915	RAB17	82	49.198	Amphiprion_percula
ENSPCIG00000021558	-	66	59.487	ENSACAG00000004554	RAB17	88	59.487	Anolis_carolinensis
ENSPCIG00000021558	-	63	51.630	ENSACLG00000001218	RAB17	81	51.630	Astatotilapia_calliptera
ENSPCIG00000021558	-	70	64.179	ENSFCAG00000012724	RAB17	94	64.179	Felis_catus
ENSPCIG00000021558	-	64	62.162	ENSFALG00000012783	RAB17	86	62.162	Ficedula_albicollis
ENSPCIG00000021558	-	62	63.687	ENSGALG00000003899	RAB17	81	63.687	Gallus_gallus
ENSPCIG00000021558	-	63	51.087	ENSHBUG00000001462	RAB17	81	51.087	Haplochromis_burtoni
ENSPCIG00000021558	-	62	45.161	ENSLBEG00000027691	RAB17	80	45.161	Labrus_bergylta
ENSPCIG00000021558	-	63	51.087	ENSMZEG00005013677	RAB17	81	51.087	Maylandia_zebra
ENSPCIG00000021558	-	66	61.340	ENSMGAG00000003135	RAB17	88	61.340	Meleagris_gallopavo
ENSPCIG00000021558	-	72	62.981	ENSMOCG00000006448	Rab17	98	62.981	Microtus_ochrogaster
ENSPCIG00000021558	-	64	48.663	ENSMMOG00000019258	RAB17	80	49.451	Mola_mola
ENSPCIG00000021558	-	72	77.885	ENSMODG00000008949	RAB17	97	77.885	Monodelphis_domestica
ENSPCIG00000021558	-	63	39.130	ENSMALG00000007905	RAB17	74	40.217	Monopterus_albus
ENSPCIG00000021558	-	63	51.087	ENSNBRG00000017793	RAB17	82	51.087	Neolamprologus_brichardi
ENSPCIG00000021558	-	61	88.068	ENSMEUG00000005002	RAB17	100	88.068	Notamacropus_eugenii
ENSPCIG00000021558	-	63	51.630	ENSONIG00000016776	RAB17	88	54.717	Oreochromis_niloticus
ENSPCIG00000021558	-	70	64.179	ENSPPRG00000003974	RAB17	94	64.179	Panthera_pardus
ENSPCIG00000021558	-	70	61.576	ENSPTIG00000014452	RAB17	95	61.576	Panthera_tigris_altaica
ENSPCIG00000021558	-	61	64.773	ENSPSIG00000016995	RAB17	74	64.773	Pelodiscus_sinensis
ENSPCIG00000021558	-	63	51.087	ENSPNYG00000011135	RAB17	81	51.087	Pundamilia_nyererei
ENSPCIG00000021558	-	70	86.700	ENSSHAG00000009306	RAB17	95	86.700	Sarcophilus_harrisii
ENSPCIG00000021558	-	62	46.703	ENSSDUG00000006618	RAB17	80	47.802	Seriola_dumerili
ENSPCIG00000021558	-	62	46.154	ENSSLDG00000020918	RAB17	80	47.253	Seriola_lalandi_dorsalis
ENSPCIG00000021558	-	64	49.198	ENSSPAG00000022624	-	83	49.198	Stegastes_partitus
ENSPCIG00000021558	-	65	59.574	ENSTGUG00000003786	RAB17	93	58.081	Taeniopygia_guttata