EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000021848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 12203 bases
Position: chrFUWB01001449.1:564407-576609
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000029360	Mitoc_L55	PF09776.9	3.4e-53	1	1
ENSPCIP00000029361	Mitoc_L55	PF09776.9	3.4e-53	1	1
ENSPCIP00000029362	Mitoc_L55	PF09776.9	6.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000036094	-	1036	-	ENSPCIP00000029360	126 (aa)	-	-
ENSPCIT00000036095	-	928	-	ENSPCIP00000029361	126 (aa)	-	-
ENSPCIT00000036096	-	702	-	ENSPCIP00000029362	154 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000021848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000021848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000021848	-	79	52.941	ENSAPOG00000002881	zgc:171480	69	53.000	Acanthochromis_polyacanthus
ENSPCIG00000021848	-	79	55.000	ENSACIG00000001646	zgc:171480	73	55.000	Amphilophus_citrinellus
ENSPCIG00000021848	-	79	53.000	ENSAOCG00000016155	zgc:171480	69	53.000	Amphiprion_ocellaris
ENSPCIG00000021848	-	79	54.000	ENSAPEG00000022327	zgc:171480	69	54.000	Amphiprion_percula
ENSPCIG00000021848	-	94	42.069	ENSATEG00000005625	zgc:171480	86	42.069	Anabas_testudineus
ENSPCIG00000021848	-	99	50.400	ENSACAG00000006897	-	98	50.400	Anolis_carolinensis
ENSPCIG00000021848	-	79	55.769	ENSACLG00000005172	zgc:171480	72	55.769	Astatotilapia_calliptera
ENSPCIG00000021848	-	92	50.000	ENSAMXG00000043839	zgc:171480	88	50.000	Astyanax_mexicanus
ENSPCIG00000021848	-	99	56.800	ENSCPBG00000001771	-	99	56.800	Chrysemys_picta_bellii
ENSPCIG00000021848	-	94	41.538	ENSCSEG00000019533	zgc:171480	93	43.511	Cynoglossus_semilaevis
ENSPCIG00000021848	-	91	51.304	ENSDARG00000043402	zgc:171480	86	51.304	Danio_rerio
ENSPCIG00000021848	-	93	53.846	ENSELUG00000007716	zgc:171480	89	53.846	Esox_lucius
ENSPCIG00000021848	-	78	48.980	ENSFALG00000001083	-	100	48.980	Ficedula_albicollis
ENSPCIG00000021848	-	77	39.516	ENSFALG00000001082	-	52	50.649	Ficedula_albicollis
ENSPCIG00000021848	-	79	46.154	ENSFHEG00000000203	zgc:171480	82	42.857	Fundulus_heteroclitus
ENSPCIG00000021848	-	79	53.000	ENSGMOG00000019009	zgc:171480	97	53.000	Gadus_morhua
ENSPCIG00000021848	-	99	48.000	ENSGALG00000038820	-	100	49.600	Gallus_gallus
ENSPCIG00000021848	-	83	49.541	ENSGAFG00000004832	-	72	49.091	Gambusia_affinis
ENSPCIG00000021848	-	73	52.174	ENSGACG00000002136	zgc:171480	99	55.914	Gasterosteus_aculeatus
ENSPCIG00000021848	-	93	55.556	ENSGAGG00000001806	-	94	55.556	Gopherus_agassizii
ENSPCIG00000021848	-	79	55.769	ENSHBUG00000007895	zgc:171480	72	55.769	Haplochromis_burtoni
ENSPCIG00000021848	-	94	47.500	ENSHCOG00000003526	zgc:171480	62	47.500	Hippocampus_comes
ENSPCIG00000021848	-	91	54.783	ENSIPUG00000001273	mrpl55	92	53.279	Ictalurus_punctatus
ENSPCIG00000021848	-	79	50.495	ENSKMAG00000002011	zgc:171480	78	50.495	Kryptolebias_marmoratus
ENSPCIG00000021848	-	94	46.721	ENSLBEG00000010915	zgc:171480	96	46.721	Labrus_bergylta
ENSPCIG00000021848	-	94	46.721	ENSLBEG00000016107	-	96	46.721	Labrus_bergylta
ENSPCIG00000021848	-	98	50.407	ENSLACG00000016281	zgc:171480	93	50.407	Latimeria_chalumnae
ENSPCIG00000021848	-	79	54.000	ENSMAMG00000022250	zgc:171480	84	46.774	Mastacembelus_armatus
ENSPCIG00000021848	-	79	55.769	ENSMZEG00005015585	zgc:171480	72	55.769	Maylandia_zebra
ENSPCIG00000021848	-	99	48.000	ENSMGAG00000002612	-	100	48.000	Meleagris_gallopavo
ENSPCIG00000021848	-	79	45.000	ENSMMOG00000008740	-	75	45.000	Mola_mola
ENSPCIG00000021848	-	92	43.590	ENSMALG00000019823	zgc:171480	90	45.614	Monopterus_albus
ENSPCIG00000021848	-	79	54.000	ENSNBRG00000019447	zgc:171480	72	54.000	Neolamprologus_brichardi
ENSPCIG00000021848	-	79	54.808	ENSONIG00000007645	zgc:171480	73	54.808	Oreochromis_niloticus
ENSPCIG00000021848	-	79	54.369	ENSORLG00020006963	zgc:171480	74	54.369	Oryzias_latipes_hni
ENSPCIG00000021848	-	79	54.369	ENSORLG00015003266	zgc:171480	74	54.369	Oryzias_latipes_hsok
ENSPCIG00000021848	-	82	54.369	ENSOMEG00000008184	zgc:171480	74	54.369	Oryzias_melastigma
ENSPCIG00000021848	-	94	52.101	ENSPKIG00000006753	zgc:171480	91	52.101	Paramormyrops_kingsleyae
ENSPCIG00000021848	-	99	59.200	ENSPSIG00000010893	-	99	59.200	Pelodiscus_sinensis
ENSPCIG00000021848	-	86	49.123	ENSPMGG00000012657	-	88	49.123	Periophthalmus_magnuspinnatus
ENSPCIG00000021848	-	74	47.368	ENSPMAG00000000867	zgc:171480	86	47.059	Petromyzon_marinus
ENSPCIG00000021848	-	98	45.455	ENSPFOG00000012703	zgc:171480	90	45.455	Poecilia_formosa
ENSPCIG00000021848	-	87	49.123	ENSPREG00000020328	zgc:171480	77	49.123	Poecilia_reticulata
ENSPCIG00000021848	-	91	56.522	ENSPNAG00000017309	zgc:171480	83	56.522	Pygocentrus_nattereri
ENSPCIG00000021848	-	99	52.381	ENSSFOG00015015668	mrpl55	96	52.381	Scleropages_formosus
ENSPCIG00000021848	-	79	54.455	ENSSMAG00000005429	zgc:171480	71	54.455	Scophthalmus_maximus
ENSPCIG00000021848	-	90	50.427	ENSSDUG00000022556	zgc:171480	76	50.427	Seriola_dumerili
ENSPCIG00000021848	-	90	49.573	ENSSLDG00000019598	zgc:171480	76	49.573	Seriola_lalandi_dorsalis
ENSPCIG00000021848	-	99	52.000	ENSSPUG00000000735	-	99	52.000	Sphenodon_punctatus
ENSPCIG00000021848	-	79	55.000	ENSSPAG00000011598	zgc:171480	70	55.000	Stegastes_partitus
ENSPCIG00000021848	-	83	50.476	ENSTRUG00000003082	zgc:171480	73	50.476	Takifugu_rubripes
ENSPCIG00000021848	-	77	46.392	ENSXCOG00000005887	zgc:171480	79	46.392	Xiphophorus_couchianus
ENSPCIG00000021848	-	85	46.729	ENSXMAG00000007937	zgc:171480	76	46.296	Xiphophorus_maculatus