EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000021882 (Gene tree)
Gene ID: 110196700
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chrFUWB01000802.1:456452-459187
Accession: 110196700
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000029405	RNA_ligase	PF09414.10	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000036144	LIG4-201	2736	-	ENSPCIP00000029405	911 (aa)	XP_020825723	UPI000A28B47A

Gene Model

Click here to download ENSPCIG00000021882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000021882's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000021882	LIG4	100	84.430	ENSG00000174405	LIG4	100	84.615	Homo_sapiens
ENSPCIG00000021882	LIG4	99	64.984	ENSAPOG00000000866	lig4	99	65.093	Acanthochromis_polyacanthus
ENSPCIG00000021882	LIG4	100	82.018	ENSAMEG00000019685	LIG4	99	82.018	Ailuropoda_melanoleuca
ENSPCIG00000021882	LIG4	99	66.154	ENSACIG00000018309	lig4	99	66.264	Amphilophus_citrinellus
ENSPCIG00000021882	LIG4	99	65.376	ENSAOCG00000011768	lig4	99	65.487	Amphiprion_ocellaris
ENSPCIG00000021882	LIG4	99	65.487	ENSAPEG00000017815	lig4	99	65.597	Amphiprion_percula
ENSPCIG00000021882	LIG4	99	65.423	ENSATEG00000005583	lig4	99	65.532	Anabas_testudineus
ENSPCIG00000021882	LIG4	97	77.324	ENSAPLG00000001673	LIG4	99	77.324	Anas_platyrhynchos
ENSPCIG00000021882	LIG4	99	75.442	ENSACAG00000014566	LIG4	99	75.442	Anolis_carolinensis
ENSPCIG00000021882	LIG4	100	82.656	ENSANAG00000012446	LIG4	100	82.656	Aotus_nancymaae
ENSPCIG00000021882	LIG4	99	65.824	ENSACLG00000027051	lig4	99	65.824	Astatotilapia_calliptera
ENSPCIG00000021882	LIG4	99	64.301	ENSAMXG00000008192	lig4	94	64.301	Astyanax_mexicanus
ENSPCIG00000021882	LIG4	100	82.785	ENSBTAG00000015868	LIG4	100	82.785	Bos_taurus
ENSPCIG00000021882	LIG4	100	81.998	ENSCJAG00000014689	LIG4	100	81.998	Callithrix_jacchus
ENSPCIG00000021882	LIG4	100	83.553	ENSCAFG00000006031	LIG4	100	83.553	Canis_familiaris
ENSPCIG00000021882	LIG4	100	83.553	ENSCAFG00020021230	LIG4	100	83.553	Canis_lupus_dingo
ENSPCIG00000021882	LIG4	100	82.018	ENSCHIG00000001019	LIG4	100	82.018	Capra_hircus
ENSPCIG00000021882	LIG4	99	82.080	ENSCAPG00000006284	LIG4	99	82.080	Cavia_aperea
ENSPCIG00000021882	LIG4	100	81.798	ENSCPOG00000014266	LIG4	100	81.798	Cavia_porcellus
ENSPCIG00000021882	LIG4	100	82.437	ENSCCAG00000019971	LIG4	100	82.437	Cebus_capucinus
ENSPCIG00000021882	LIG4	100	83.333	ENSCATG00000021075	LIG4	100	83.333	Cercocebus_atys
ENSPCIG00000021882	LIG4	100	82.456	ENSCLAG00000003376	LIG4	100	82.456	Chinchilla_lanigera
ENSPCIG00000021882	LIG4	100	83.662	ENSCSAG00000000211	LIG4	100	83.662	Chlorocebus_sabaeus
ENSPCIG00000021882	LIG4	99	79.249	ENSCPBG00000023291	LIG4	99	79.080	Chrysemys_picta_bellii
ENSPCIG00000021882	LIG4	69	44.567	ENSCING00000009536	-	96	44.567	Ciona_intestinalis
ENSPCIG00000021882	LIG4	83	44.415	ENSCSAVG00000010336	-	98	44.415	Ciona_savignyi
ENSPCIG00000021882	LIG4	100	83.114	ENSCANG00000005805	LIG4	100	83.114	Colobus_angolensis_palliatus
ENSPCIG00000021882	LIG4	100	80.613	ENSCGRG00001012072	Lig4	100	80.613	Cricetulus_griseus_chok1gshd
ENSPCIG00000021882	LIG4	100	80.613	ENSCGRG00000013417	Lig4	100	80.613	Cricetulus_griseus_crigri
ENSPCIG00000021882	LIG4	97	65.315	ENSCSEG00000013905	lig4	96	65.315	Cynoglossus_semilaevis
ENSPCIG00000021882	LIG4	99	65.932	ENSCVAG00000007896	lig4	99	65.932	Cyprinodon_variegatus
ENSPCIG00000021882	LIG4	99	64.009	ENSDARG00000060620	lig4	98	64.009	Danio_rerio
ENSPCIG00000021882	LIG4	100	84.320	ENSDNOG00000000513	LIG4	100	84.775	Dasypus_novemcinctus
ENSPCIG00000021882	LIG4	100	81.360	ENSDORG00000027303	Lig4	100	81.360	Dipodomys_ordii
ENSPCIG00000021882	LIG4	89	31.382	FBgn0030506	Lig4	91	31.382	Drosophila_melanogaster
ENSPCIG00000021882	LIG4	99	80.842	ENSETEG00000015563	LIG4	100	81.063	Echinops_telfairi
ENSPCIG00000021882	LIG4	99	42.719	ENSEBUG00000014243	lig4	98	42.524	Eptatretus_burgeri
ENSPCIG00000021882	LIG4	100	83.772	ENSEASG00005022073	LIG4	100	83.772	Equus_asinus_asinus
ENSPCIG00000021882	LIG4	100	83.224	ENSECAG00000003257	LIG4	100	83.224	Equus_caballus
ENSPCIG00000021882	LIG4	99	66.519	ENSELUG00000006787	lig4	99	66.519	Esox_lucius
ENSPCIG00000021882	LIG4	100	82.675	ENSFCAG00000031985	LIG4	100	82.675	Felis_catus
ENSPCIG00000021882	LIG4	89	76.867	ENSFALG00000004214	LIG4	99	76.867	Ficedula_albicollis
ENSPCIG00000021882	LIG4	100	83.004	ENSFDAG00000008973	LIG4	100	83.004	Fukomys_damarensis
ENSPCIG00000021882	LIG4	99	64.435	ENSFHEG00000007398	lig4	90	64.686	Fundulus_heteroclitus
ENSPCIG00000021882	LIG4	85	62.949	ENSGMOG00000012843	lig4	99	63.484	Gadus_morhua
ENSPCIG00000021882	LIG4	99	76.754	ENSGALG00000016854	LIG4	99	76.754	Gallus_gallus
ENSPCIG00000021882	LIG4	99	65.517	ENSGAFG00000019779	lig4	95	65.055	Gambusia_affinis
ENSPCIG00000021882	LIG4	99	63.417	ENSGACG00000014135	lig4	99	63.717	Gasterosteus_aculeatus
ENSPCIG00000021882	LIG4	100	84.320	ENSGGOG00000027771	LIG4	100	84.320	Gorilla_gorilla
ENSPCIG00000021882	LIG4	99	65.604	ENSHBUG00000006245	lig4	99	65.604	Haplochromis_burtoni
ENSPCIG00000021882	LIG4	100	82.785	ENSHGLG00000000718	LIG4	100	82.785	Heterocephalus_glaber_female
ENSPCIG00000021882	LIG4	100	82.785	ENSHGLG00100003265	LIG4	100	82.785	Heterocephalus_glaber_male
ENSPCIG00000021882	LIG4	99	64.066	ENSHCOG00000012010	lig4	99	64.066	Hippocampus_comes
ENSPCIG00000021882	LIG4	99	65.498	ENSIPUG00000013748	lig4	99	65.498	Ictalurus_punctatus
ENSPCIG00000021882	LIG4	100	82.785	ENSSTOG00000024303	LIG4	100	82.785	Ictidomys_tridecemlineatus
ENSPCIG00000021882	LIG4	100	79.693	ENSJJAG00000006750	Lig4	100	80.263	Jaculus_jaculus
ENSPCIG00000021882	LIG4	99	64.823	ENSKMAG00000001149	lig4	99	64.823	Kryptolebias_marmoratus
ENSPCIG00000021882	LIG4	91	65.306	ENSLBEG00000014578	lig4	100	65.426	Labrus_bergylta
ENSPCIG00000021882	LIG4	99	72.357	ENSLACG00000003282	LIG4	99	72.357	Latimeria_chalumnae
ENSPCIG00000021882	LIG4	99	69.923	ENSLOCG00000008901	lig4	98	69.923	Lepisosteus_oculatus
ENSPCIG00000021882	LIG4	100	82.147	ENSLAFG00000031152	LIG4	100	82.147	Loxodonta_africana
ENSPCIG00000021882	LIG4	100	83.662	ENSMFAG00000037235	LIG4	100	83.662	Macaca_fascicularis
ENSPCIG00000021882	LIG4	100	83.443	ENSMMUG00000008874	LIG4	100	83.443	Macaca_mulatta
ENSPCIG00000021882	LIG4	100	83.662	ENSMNEG00000023575	LIG4	100	83.662	Macaca_nemestrina
ENSPCIG00000021882	LIG4	100	83.333	ENSMLEG00000026720	LIG4	100	83.333	Mandrillus_leucophaeus
ENSPCIG00000021882	LIG4	99	66.118	ENSMAMG00000008472	lig4	99	66.228	Mastacembelus_armatus
ENSPCIG00000021882	LIG4	99	65.714	ENSMZEG00005001855	lig4	99	65.714	Maylandia_zebra
ENSPCIG00000021882	LIG4	100	77.099	ENSMGAG00000015532	LIG4	100	77.099	Meleagris_gallopavo
ENSPCIG00000021882	LIG4	100	78.180	ENSMOCG00000019000	Lig4	100	78.180	Microtus_ochrogaster
ENSPCIG00000021882	LIG4	99	64.159	ENSMMOG00000004390	lig4	99	64.159	Mola_mola
ENSPCIG00000021882	LIG4	100	92.426	ENSMODG00000025064	LIG4	100	92.426	Monodelphis_domestica
ENSPCIG00000021882	LIG4	99	65.376	ENSMALG00000008555	lig4	99	65.376	Monopterus_albus
ENSPCIG00000021882	LIG4	100	81.579	MGP_CAROLIEiJ_G0030809	Lig4	100	81.579	Mus_caroli
ENSPCIG00000021882	LIG4	100	81.360	ENSMUSG00000049717	Lig4	100	81.360	Mus_musculus
ENSPCIG00000021882	LIG4	100	81.140	MGP_PahariEiJ_G0021270	Lig4	100	81.140	Mus_pahari
ENSPCIG00000021882	LIG4	100	81.469	MGP_SPRETEiJ_G0031917	Lig4	100	81.469	Mus_spretus
ENSPCIG00000021882	LIG4	100	82.346	ENSMPUG00000018675	LIG4	100	82.346	Mustela_putorius_furo
ENSPCIG00000021882	LIG4	100	83.114	ENSMLUG00000001267	LIG4	100	83.114	Myotis_lucifugus
ENSPCIG00000021882	LIG4	100	80.592	ENSNGAG00000013258	Lig4	100	80.592	Nannospalax_galili
ENSPCIG00000021882	LIG4	99	65.604	ENSNBRG00000021252	lig4	99	65.604	Neolamprologus_brichardi
ENSPCIG00000021882	LIG4	100	83.553	ENSNLEG00000007888	LIG4	100	83.553	Nomascus_leucogenys
ENSPCIG00000021882	LIG4	100	80.921	ENSOPRG00000005765	LIG4	100	80.921	Ochotona_princeps
ENSPCIG00000021882	LIG4	100	80.571	ENSODEG00000019683	LIG4	100	80.921	Octodon_degus
ENSPCIG00000021882	LIG4	99	65.495	ENSONIG00000011969	lig4	98	65.604	Oreochromis_niloticus
ENSPCIG00000021882	LIG4	100	82.566	ENSOCUG00000015734	LIG4	100	82.566	Oryctolagus_cuniculus
ENSPCIG00000021882	LIG4	99	64.145	ENSORLG00000004041	lig4	99	64.145	Oryzias_latipes
ENSPCIG00000021882	LIG4	99	64.474	ENSORLG00020019607	lig4	99	64.474	Oryzias_latipes_hni
ENSPCIG00000021882	LIG4	99	64.364	ENSORLG00015017754	lig4	99	64.364	Oryzias_latipes_hsok
ENSPCIG00000021882	LIG4	75	68.082	ENSOMEG00000003459	lig4	99	68.082	Oryzias_melastigma
ENSPCIG00000021882	LIG4	100	82.913	ENSOGAG00000032120	LIG4	99	82.913	Otolemur_garnettii
ENSPCIG00000021882	LIG4	82	84.316	ENSOARG00000005590	LIG4	98	84.316	Ovis_aries
ENSPCIG00000021882	LIG4	100	84.430	ENSPPAG00000032998	LIG4	100	84.430	Pan_paniscus
ENSPCIG00000021882	LIG4	100	83.114	ENSPPRG00000017804	LIG4	100	83.114	Panthera_pardus
ENSPCIG00000021882	LIG4	100	83.004	ENSPTIG00000010051	LIG4	100	83.004	Panthera_tigris_altaica
ENSPCIG00000021882	LIG4	100	84.320	ENSPTRG00000006025	LIG4	100	84.320	Pan_troglodytes
ENSPCIG00000021882	LIG4	100	83.443	ENSPANG00000007562	LIG4	100	83.443	Papio_anubis
ENSPCIG00000021882	LIG4	99	66.484	ENSPKIG00000011645	lig4	98	66.484	Paramormyrops_kingsleyae
ENSPCIG00000021882	LIG4	99	78.618	ENSPSIG00000001504	LIG4	99	78.618	Pelodiscus_sinensis
ENSPCIG00000021882	LIG4	99	62.597	ENSPMGG00000013486	lig4	99	62.500	Periophthalmus_magnuspinnatus
ENSPCIG00000021882	LIG4	100	79.956	ENSPEMG00000000076	Lig4	100	79.956	Peromyscus_maniculatus_bairdii
ENSPCIG00000021882	LIG4	99	65.444	ENSPFOG00000000797	lig4	99	65.093	Poecilia_formosa
ENSPCIG00000021882	LIG4	99	65.333	ENSPLAG00000001196	lig4	99	64.984	Poecilia_latipinna
ENSPCIG00000021882	LIG4	99	65.667	ENSPMEG00000021353	lig4	99	65.203	Poecilia_mexicana
ENSPCIG00000021882	LIG4	99	65.333	ENSPREG00000007323	lig4	99	64.874	Poecilia_reticulata
ENSPCIG00000021882	LIG4	100	83.553	ENSPPYG00000005540	LIG4	100	83.553	Pongo_abelii
ENSPCIG00000021882	LIG4	100	83.443	ENSPVAG00000016403	LIG4	100	83.443	Pteropus_vampyrus
ENSPCIG00000021882	LIG4	99	65.714	ENSPNYG00000009660	lig4	99	65.714	Pundamilia_nyererei
ENSPCIG00000021882	LIG4	100	64.294	ENSPNAG00000028069	LIG4	100	64.294	Pygocentrus_nattereri
ENSPCIG00000021882	LIG4	100	64.294	ENSPNAG00000028056	lig4	100	64.294	Pygocentrus_nattereri
ENSPCIG00000021882	LIG4	100	80.592	ENSRNOG00000014605	Lig4	100	80.592	Rattus_norvegicus
ENSPCIG00000021882	LIG4	100	82.346	ENSRBIG00000039962	LIG4	100	82.346	Rhinopithecus_bieti
ENSPCIG00000021882	LIG4	100	83.443	ENSRROG00000006040	LIG4	100	83.443	Rhinopithecus_roxellana
ENSPCIG00000021882	LIG4	100	82.108	ENSSBOG00000019029	LIG4	100	82.108	Saimiri_boliviensis_boliviensis
ENSPCIG00000021882	LIG4	100	91.328	ENSSHAG00000009525	LIG4	100	91.328	Sarcophilus_harrisii
ENSPCIG00000021882	LIG4	99	65.487	ENSSFOG00015012835	lig4	99	65.487	Scleropages_formosus
ENSPCIG00000021882	LIG4	99	63.385	ENSSMAG00000011267	lig4	99	63.385	Scophthalmus_maximus
ENSPCIG00000021882	LIG4	99	65.559	ENSSDUG00000010343	lig4	98	65.559	Seriola_dumerili
ENSPCIG00000021882	LIG4	99	64.159	ENSSLDG00000003239	lig4	99	64.159	Seriola_lalandi_dorsalis
ENSPCIG00000021882	LIG4	100	77.462	ENSSARG00000006573	LIG4	100	77.462	Sorex_araneus
ENSPCIG00000021882	LIG4	93	77.041	ENSSPUG00000002444	LIG4	100	77.396	Sphenodon_punctatus
ENSPCIG00000021882	LIG4	99	65.237	ENSSPAG00000001609	lig4	99	65.237	Stegastes_partitus
ENSPCIG00000021882	LIG4	100	81.798	ENSSSCG00000009540	LIG4	100	82.018	Sus_scrofa
ENSPCIG00000021882	LIG4	99	76.243	ENSTGUG00000010795	LIG4	99	76.243	Taeniopygia_guttata
ENSPCIG00000021882	LIG4	99	64.764	ENSTRUG00000009984	lig4	99	64.764	Takifugu_rubripes
ENSPCIG00000021882	LIG4	99	65.567	ENSTNIG00000010348	lig4	99	65.642	Tetraodon_nigroviridis
ENSPCIG00000021882	LIG4	100	83.772	ENSTBEG00000017741	LIG4	100	83.772	Tupaia_belangeri
ENSPCIG00000021882	LIG4	100	82.018	ENSTTRG00000012660	LIG4	100	82.018	Tursiops_truncatus
ENSPCIG00000021882	LIG4	100	81.798	ENSUAMG00000003773	LIG4	100	81.798	Ursus_americanus
ENSPCIG00000021882	LIG4	99	72.497	ENSXETG00000002654	lig4	99	72.497	Xenopus_tropicalis
ENSPCIG00000021882	LIG4	99	65.333	ENSXCOG00000017401	lig4	99	64.874	Xiphophorus_couchianus
ENSPCIG00000021882	LIG4	99	65.372	ENSXMAG00000015142	lig4	99	64.912	Xiphophorus_maculatus