EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000021901 (Gene tree)
Gene ID: 110204851
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 5449 bases
Position: chrFUWB01001833.1:32307-37755
Accession: 110204851
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000029434	PseudoU_synth_2	PF00849.22	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000036183	RPUSD3-201	1568	XM_020980985	ENSPCIP00000029434	340 (aa)	XP_020836644	-

Gene Model

Click here to download ENSPCIG00000021901's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000021901's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000021901	RPUSD3	81	31.164	ENSPCIG00000010212	RPUSD4	75	31.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000021901	RPUSD3	97	58.702	ENSG00000156990	RPUSD3	96	58.702	Homo_sapiens
ENSPCIG00000021901	RPUSD3	94	56.798	ENSAMEG00000016227	RPUSD3	94	58.308	Ailuropoda_melanoleuca
ENSPCIG00000021901	RPUSD3	92	48.308	ENSACAG00000009836	RPUSD3	91	48.308	Anolis_carolinensis
ENSPCIG00000021901	RPUSD3	54	64.324	ENSANAG00000019945	-	74	64.324	Aotus_nancymaae
ENSPCIG00000021901	RPUSD3	62	47.534	ENSANAG00000007127	-	84	45.556	Aotus_nancymaae
ENSPCIG00000021901	RPUSD3	54	60.870	ENSANAG00000038118	-	88	60.870	Aotus_nancymaae
ENSPCIG00000021901	RPUSD3	94	57.057	ENSBTAG00000007968	RPUSD3	97	58.133	Bos_taurus
ENSPCIG00000021901	RPUSD3	96	58.876	ENSCAFG00000029733	RPUSD3	96	58.702	Canis_familiaris
ENSPCIG00000021901	RPUSD3	96	58.876	ENSCAFG00020008582	RPUSD3	95	60.577	Canis_lupus_dingo
ENSPCIG00000021901	RPUSD3	85	62.799	ENSCHIG00000026027	RPUSD3	88	62.585	Capra_hircus
ENSPCIG00000021901	RPUSD3	97	56.977	ENSTSYG00000009994	RPUSD3	97	56.977	Carlito_syrichta
ENSPCIG00000021901	RPUSD3	76	65.385	ENSCAPG00000017559	RPUSD3	98	65.385	Cavia_aperea
ENSPCIG00000021901	RPUSD3	78	64.045	ENSCPOG00000037956	RPUSD3	82	60.616	Cavia_porcellus
ENSPCIG00000021901	RPUSD3	84	65.172	ENSCCAG00000029530	RPUSD3	85	65.934	Cebus_capucinus
ENSPCIG00000021901	RPUSD3	84	64.483	ENSCATG00000036939	RPUSD3	85	64.286	Cercocebus_atys
ENSPCIG00000021901	RPUSD3	84	64.138	ENSCSAG00000010506	RPUSD3	82	64.138	Chlorocebus_sabaeus
ENSPCIG00000021901	RPUSD3	71	57.377	ENSCPBG00000008825	RPUSD3	92	57.377	Chrysemys_picta_bellii
ENSPCIG00000021901	RPUSD3	84	64.483	ENSCANG00000040711	RPUSD3	85	64.835	Colobus_angolensis_palliatus
ENSPCIG00000021901	RPUSD3	84	60.764	ENSCGRG00001004923	Rpusd3	80	60.764	Cricetulus_griseus_chok1gshd
ENSPCIG00000021901	RPUSD3	84	60.764	ENSCGRG00000018315	Rpusd3	84	60.764	Cricetulus_griseus_crigri
ENSPCIG00000021901	RPUSD3	85	62.199	ENSDNOG00000039160	RPUSD3	77	62.543	Dasypus_novemcinctus
ENSPCIG00000021901	RPUSD3	76	62.547	ENSDORG00000026827	Rpusd3	92	62.547	Dipodomys_ordii
ENSPCIG00000021901	RPUSD3	85	59.727	ENSETEG00000006538	RPUSD3	82	60.208	Echinops_telfairi
ENSPCIG00000021901	RPUSD3	66	36.957	ENSEBUG00000015605	RPUSD3	75	36.957	Eptatretus_burgeri
ENSPCIG00000021901	RPUSD3	84	57.823	ENSEASG00005014160	RPUSD3	95	57.185	Equus_asinus_asinus
ENSPCIG00000021901	RPUSD3	83	59.107	ENSECAG00000019988	RPUSD3	94	58.284	Equus_caballus
ENSPCIG00000021901	RPUSD3	62	61.792	ENSEEUG00000007353	RPUSD3	60	61.792	Erinaceus_europaeus
ENSPCIG00000021901	RPUSD3	84	65.278	ENSFCAG00000014199	RPUSD3	82	65.052	Felis_catus
ENSPCIG00000021901	RPUSD3	79	50.000	ENSFALG00000012968	RPUSD3	99	50.000	Ficedula_albicollis
ENSPCIG00000021901	RPUSD3	76	66.412	ENSFDAG00000008350	RPUSD3	86	64.029	Fukomys_damarensis
ENSPCIG00000021901	RPUSD3	80	56.569	ENSGAGG00000007493	RPUSD3	82	58.846	Gopherus_agassizii
ENSPCIG00000021901	RPUSD3	97	58.997	ENSGGOG00000013120	RPUSD3	96	58.997	Gorilla_gorilla
ENSPCIG00000021901	RPUSD3	81	63.669	ENSHGLG00000011722	RPUSD3	71	63.669	Heterocephalus_glaber_female
ENSPCIG00000021901	RPUSD3	81	63.669	ENSHGLG00100016038	RPUSD3	71	63.669	Heterocephalus_glaber_male
ENSPCIG00000021901	RPUSD3	96	56.973	ENSSTOG00000002125	RPUSD3	96	56.973	Ictidomys_tridecemlineatus
ENSPCIG00000021901	RPUSD3	85	59.727	ENSJJAG00000012679	Rpusd3	85	59.727	Jaculus_jaculus
ENSPCIG00000021901	RPUSD3	87	60.535	ENSLAFG00000017501	RPUSD3	87	60.535	Loxodonta_africana
ENSPCIG00000021901	RPUSD3	84	63.793	ENSMFAG00000032407	RPUSD3	82	63.793	Macaca_fascicularis
ENSPCIG00000021901	RPUSD3	84	64.138	ENSMMUG00000010628	RPUSD3	90	64.138	Macaca_mulatta
ENSPCIG00000021901	RPUSD3	84	63.793	ENSMNEG00000040308	RPUSD3	82	63.793	Macaca_nemestrina
ENSPCIG00000021901	RPUSD3	84	64.483	ENSMLEG00000033940	RPUSD3	85	64.286	Mandrillus_leucophaeus
ENSPCIG00000021901	RPUSD3	83	61.189	ENSMAUG00000015473	Rpusd3	83	61.189	Mesocricetus_auratus
ENSPCIG00000021901	RPUSD3	98	59.064	ENSMICG00000002315	RPUSD3	96	62.319	Microcebus_murinus
ENSPCIG00000021901	RPUSD3	84	59.722	ENSMOCG00000022613	Rpusd3	84	59.722	Microtus_ochrogaster
ENSPCIG00000021901	RPUSD3	100	80.925	ENSMODG00000005210	RPUSD3	92	80.925	Monodelphis_domestica
ENSPCIG00000021901	RPUSD3	86	59.468	MGP_CAROLIEiJ_G0028725	Rpusd3	89	61.925	Mus_caroli
ENSPCIG00000021901	RPUSD3	84	60.764	ENSMUSG00000051169	Rpusd3	84	63.274	Mus_musculus
ENSPCIG00000021901	RPUSD3	86	59.801	MGP_PahariEiJ_G0022476	Rpusd3	89	62.762	Mus_pahari
ENSPCIG00000021901	RPUSD3	86	60.667	MGP_SPRETEiJ_G0029753	Rpusd3	89	62.762	Mus_spretus
ENSPCIG00000021901	RPUSD3	96	58.284	ENSMPUG00000017132	RPUSD3	96	58.284	Mustela_putorius_furo
ENSPCIG00000021901	RPUSD3	96	58.407	ENSMLUG00000006135	RPUSD3	97	58.407	Myotis_lucifugus
ENSPCIG00000021901	RPUSD3	84	60.069	ENSNGAG00000023704	Rpusd3	85	60.069	Nannospalax_galili
ENSPCIG00000021901	RPUSD3	97	47.788	ENSNLEG00000004214	RPUSD3	85	64.286	Nomascus_leucogenys
ENSPCIG00000021901	RPUSD3	76	86.434	ENSMEUG00000013098	-	100	86.434	Notamacropus_eugenii
ENSPCIG00000021901	RPUSD3	99	46.647	ENSOPRG00000002300	RPUSD3	97	46.647	Ochotona_princeps
ENSPCIG00000021901	RPUSD3	76	64.615	ENSODEG00000018137	RPUSD3	90	64.615	Octodon_degus
ENSPCIG00000021901	RPUSD3	83	46.316	ENSOANG00000012081	-	99	46.316	Ornithorhynchus_anatinus
ENSPCIG00000021901	RPUSD3	84	53.559	ENSOCUG00000027885	RPUSD3	85	53.559	Oryctolagus_cuniculus
ENSPCIG00000021901	RPUSD3	89	60.129	ENSOGAG00000012592	RPUSD3	99	59.936	Otolemur_garnettii
ENSPCIG00000021901	RPUSD3	84	63.889	ENSOARG00000005928	RPUSD3	82	63.668	Ovis_aries
ENSPCIG00000021901	RPUSD3	96	59.050	ENSPPAG00000038083	RPUSD3	96	59.050	Pan_paniscus
ENSPCIG00000021901	RPUSD3	97	59.172	ENSPPRG00000024433	RPUSD3	93	58.997	Panthera_pardus
ENSPCIG00000021901	RPUSD3	84	66.319	ENSPTIG00000006828	RPUSD3	84	66.090	Panthera_tigris_altaica
ENSPCIG00000021901	RPUSD3	96	59.050	ENSPTRG00000051760	RPUSD3	96	59.050	Pan_troglodytes
ENSPCIG00000021901	RPUSD3	84	64.483	ENSPANG00000023885	RPUSD3	85	64.286	Papio_anubis
ENSPCIG00000021901	RPUSD3	84	61.111	ENSPEMG00000017245	Rpusd3	84	61.111	Peromyscus_maniculatus_bairdii
ENSPCIG00000021901	RPUSD3	96	59.644	ENSPPYG00000013676	RPUSD3	96	59.644	Pongo_abelii
ENSPCIG00000021901	RPUSD3	97	59.824	ENSPCOG00000018314	RPUSD3	96	59.649	Propithecus_coquereli
ENSPCIG00000021901	RPUSD3	94	57.895	ENSPVAG00000011107	RPUSD3	89	57.944	Pteropus_vampyrus
ENSPCIG00000021901	RPUSD3	86	56.811	ENSRNOG00000009084	Rpusd3	89	56.811	Rattus_norvegicus
ENSPCIG00000021901	RPUSD3	84	64.483	ENSRBIG00000041230	RPUSD3	85	64.835	Rhinopithecus_bieti
ENSPCIG00000021901	RPUSD3	84	64.483	ENSRROG00000043328	RPUSD3	85	64.835	Rhinopithecus_roxellana
ENSPCIG00000021901	RPUSD3	84	65.172	ENSSBOG00000036106	RPUSD3	83	65.172	Saimiri_boliviensis_boliviensis
ENSPCIG00000021901	RPUSD3	89	82.680	ENSSHAG00000015536	RPUSD3	99	82.680	Sarcophilus_harrisii
ENSPCIG00000021901	RPUSD3	98	57.895	ENSSSCG00000011555	RPUSD3	96	57.895	Sus_scrofa
ENSPCIG00000021901	RPUSD3	68	52.155	ENSTGUG00000008744	RPUSD3	93	52.315	Taeniopygia_guttata
ENSPCIG00000021901	RPUSD3	67	64.912	ENSTBEG00000000176	RPUSD3	79	64.912	Tupaia_belangeri
ENSPCIG00000021901	RPUSD3	97	55.977	ENSTTRG00000007544	RPUSD3	97	57.018	Tursiops_truncatus
ENSPCIG00000021901	RPUSD3	89	59.223	ENSUAMG00000011354	RPUSD3	97	60.645	Ursus_americanus
ENSPCIG00000021901	RPUSD3	89	59.164	ENSUMAG00000018830	RPUSD3	89	60.577	Ursus_maritimus
ENSPCIG00000021901	RPUSD3	96	59.292	ENSVVUG00000023735	RPUSD3	99	59.292	Vulpes_vulpes
ENSPCIG00000021901	RPUSD3	81	47.857	ENSXETG00000023546	rpusd3	99	47.857	Xenopus_tropicalis