EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000022399 (Gene tree)
Gene ID: 110206179
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 3070 bases
Position: chrFUWB01000628.1:852236-855305
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000030066	MMR_HSR1	PF01926.23	7.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000037017	-	1102	-	ENSPCIP00000030066	221 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000022399's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000022399's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000022399	-	84	40.323	ENSPCIG00000021943	RAB2B	89	40.761
ENSPCIG00000022399	-	78	41.860	ENSPCIG00000029350	-	84	41.860
ENSPCIG00000022399	-	86	38.421	ENSPCIG00000008407	RAB1B	91	38.421
ENSPCIG00000022399	-	87	32.124	ENSPCIG00000004714	RAB22A	96	32.124
ENSPCIG00000022399	-	53	33.333	ENSPCIG00000014229	KRAS	63	33.929
ENSPCIG00000022399	-	63	30.556	ENSPCIG00000009683	-	69	30.556
ENSPCIG00000022399	-	73	36.145	ENSPCIG00000000237	RAB7A	79	36.145
ENSPCIG00000022399	-	77	35.294	ENSPCIG00000020225	-	74	35.294
ENSPCIG00000022399	-	68	39.474	ENSPCIG00000027078	RAB33B	68	39.474
ENSPCIG00000022399	-	90	34.171	ENSPCIG00000018321	RAB5A	83	34.171
ENSPCIG00000022399	-	73	44.785	ENSPCIG00000004450	-	74	44.785
ENSPCIG00000022399	-	97	37.327	ENSPCIG00000006878	RAB11A	95	37.327
ENSPCIG00000022399	-	74	32.317	ENSPCIG00000022594	NRAS	85	32.317
ENSPCIG00000022399	-	71	36.943	ENSPCIG00000007267	RAB23	70	36.095
ENSPCIG00000022399	-	83	35.519	ENSPCIG00000020371	-	84	35.519
ENSPCIG00000022399	-	75	38.554	ENSPCIG00000021558	-	60	38.636
ENSPCIG00000022399	-	69	41.176	ENSPCIG00000010292	-	73	41.176
ENSPCIG00000022399	-	71	34.177	ENSPCIG00000006467	MRAS	92	32.323
ENSPCIG00000022399	-	67	42.282	ENSPCIG00000015312	RAB33A	61	42.282
ENSPCIG00000022399	-	86	57.592	ENSPCIG00000029333	RAB39B	90	57.592
ENSPCIG00000022399	-	88	38.144	ENSPCIG00000009235	RAB14	89	38.144
ENSPCIG00000022399	-	88	38.974	ENSPCIG00000027547	RAB30	86	38.974
ENSPCIG00000022399	-	80	30.939	ENSPCIG00000025239	DNAJC27	66	30.939
ENSPCIG00000022399	-	95	35.238	ENSPCIG00000018951	RAB25	95	35.238
ENSPCIG00000022399	-	74	34.146	ENSPCIG00000008359	HRAS	85	34.146
ENSPCIG00000022399	-	82	37.755	ENSPCIG00000000024	-	83	37.755
ENSPCIG00000022399	-	71	45.342	ENSPCIG00000020415	RAB9B	79	45.342
ENSPCIG00000022399	-	94	36.792	ENSPCIG00000028346	RAB15	96	36.792
ENSPCIG00000022399	-	67	36.486	ENSPCIG00000003392	RHEB	86	36.486
ENSPCIG00000022399	-	92	35.922	ENSPCIG00000023212	RAB1A	97	35.922
ENSPCIG00000022399	-	67	32.215	ENSPCIG00000010893	RAB36	71	32.215
ENSPCIG00000022399	-	92	37.264	ENSPCIG00000017722	RAB3D	94	37.264
ENSPCIG00000022399	-	81	37.430	ENSPCIG00000028705	-	76	37.430

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000022399	-	91	60.488	ENSACIG00000016958	si:dkey-34d22.5	92	60.488	Amphilophus_citrinellus
ENSPCIG00000022399	-	90	61.692	ENSATEG00000010784	si:dkey-34d22.5	78	61.692	Anabas_testudineus
ENSPCIG00000022399	-	97	66.667	ENSCPBG00000011236	-	100	66.667	Chrysemys_picta_bellii
ENSPCIG00000022399	-	91	56.398	ENSCSEG00000019183	si:dkey-34d22.5	93	56.398	Cynoglossus_semilaevis
ENSPCIG00000022399	-	88	59.898	ENSCVAG00000017064	si:dkey-34d22.5	89	59.898	Cyprinodon_variegatus
ENSPCIG00000022399	-	79	44.253	ENSDARG00000100379	si:dkey-34d22.2	94	44.253	Danio_rerio
ENSPCIG00000022399	-	97	62.273	ENSFALG00000001373	-	100	62.273	Ficedula_albicollis
ENSPCIG00000022399	-	88	61.421	ENSFHEG00000012041	si:dkey-34d22.5	88	61.421	Fundulus_heteroclitus
ENSPCIG00000022399	-	97	62.617	ENSGALG00000000994	-	100	62.617	Gallus_gallus
ENSPCIG00000022399	-	88	60.406	ENSGAFG00000008183	si:dkey-34d22.5	89	60.406	Gambusia_affinis
ENSPCIG00000022399	-	91	66.176	ENSGAGG00000004918	-	100	66.176	Gopherus_agassizii
ENSPCIG00000022399	-	88	60.914	ENSHCOG00000015692	si:dkey-34d22.5	91	60.914	Hippocampus_comes
ENSPCIG00000022399	-	90	62.562	ENSKMAG00000012778	si:dkey-34d22.5	91	62.562	Kryptolebias_marmoratus
ENSPCIG00000022399	-	91	60.000	ENSLBEG00000002926	si:dkey-34d22.5	93	60.000	Labrus_bergylta
ENSPCIG00000022399	-	97	61.215	ENSLACG00000012674	si:dkey-34d22.5	100	61.215	Latimeria_chalumnae
ENSPCIG00000022399	-	97	60.000	ENSLOCG00000003467	si:dkey-34d22.5	100	60.000	Lepisosteus_oculatus
ENSPCIG00000022399	-	91	61.463	ENSMMOG00000006846	si:dkey-34d22.5	93	61.463	Mola_mola
ENSPCIG00000022399	-	92	60.194	ENSMALG00000013152	si:dkey-34d22.5	93	60.194	Monopterus_albus
ENSPCIG00000022399	-	91	60.099	ENSORLG00000014099	si:dkey-34d22.5	93	60.099	Oryzias_latipes
ENSPCIG00000022399	-	91	60.099	ENSORLG00020020277	si:dkey-34d22.5	93	60.099	Oryzias_latipes_hni
ENSPCIG00000022399	-	91	59.606	ENSORLG00015000142	si:dkey-34d22.5	93	59.606	Oryzias_latipes_hsok
ENSPCIG00000022399	-	88	61.421	ENSOMEG00000017958	si:dkey-34d22.5	94	59.420	Oryzias_melastigma
ENSPCIG00000022399	-	96	56.164	ENSPKIG00000021209	si:dkey-34d22.5	100	56.164	Paramormyrops_kingsleyae
ENSPCIG00000022399	-	90	69.652	ENSPSIG00000006606	-	100	69.652	Pelodiscus_sinensis
ENSPCIG00000022399	-	88	62.944	ENSPMGG00000001298	-	89	62.944	Periophthalmus_magnuspinnatus
ENSPCIG00000022399	-	88	59.898	ENSPFOG00000014499	si:dkey-34d22.5	89	59.898	Poecilia_formosa
ENSPCIG00000022399	-	88	59.898	ENSPLAG00000007773	si:dkey-34d22.5	89	59.898	Poecilia_latipinna
ENSPCIG00000022399	-	88	59.898	ENSPMEG00000012932	si:dkey-34d22.5	89	59.898	Poecilia_mexicana
ENSPCIG00000022399	-	100	87.330	ENSSHAG00000008520	-	100	87.330	Sarcophilus_harrisii
ENSPCIG00000022399	-	95	58.140	ENSSFOG00015012088	rab42	96	58.140	Scleropages_formosus
ENSPCIG00000022399	-	91	60.488	ENSSLDG00000002646	si:dkey-34d22.5	92	60.488	Seriola_lalandi_dorsalis
ENSPCIG00000022399	-	88	62.437	ENSSPAG00000012955	si:dkey-34d22.5	89	62.437	Stegastes_partitus
ENSPCIG00000022399	-	92	49.261	ENSXETG00000020622	rab39a	99	49.261	Xenopus_tropicalis
ENSPCIG00000022399	-	88	59.898	ENSXCOG00000008410	si:dkey-34d22.5	89	59.898	Xiphophorus_couchianus
ENSPCIG00000022399	-	88	59.898	ENSXMAG00000029317	si:dkey-34d22.5	89	59.898	Xiphophorus_maculatus