EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPCIG00000022587 (Gene tree)
Gene ID
110219196
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Phascolarctos_cinereus
Status
putative
Strand
Plus strand
Length
35946 bases
Position
chrFUWB01002033.1:390951-426896
Accession
110219196
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPCIP00000030373CSDPF00313.221.9e-8515
ENSPCIP00000030373CSDPF00313.221.9e-8525
ENSPCIP00000030373CSDPF00313.221.9e-8535
ENSPCIP00000030373CSDPF00313.221.9e-8545
ENSPCIP00000030373CSDPF00313.221.9e-8555
ENSPCIP00000030368CSDPF00313.223.6e-8515
ENSPCIP00000030368CSDPF00313.223.6e-8525
ENSPCIP00000030368CSDPF00313.223.6e-8535
ENSPCIP00000030368CSDPF00313.223.6e-8545
ENSPCIP00000030368CSDPF00313.223.6e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPCIT00000037370CSDE1-2013153-ENSPCIP00000030368847 (aa)XP_020858008UPI000A2815D5
ENSPCIT00000037375CSDE1-2022997-ENSPCIP00000030373798 (aa)--
Gene Model
Click here to download ENSPCIG00000022587's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000022587's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPCIG00000022587CSDE110096.241ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPCIG00000022587CSDE110076.951ENSAPOG00000015538csde110076.578Acanthochromis_polyacanthus
ENSPCIG00000022587CSDE110091.228ENSAMEG00000017129CSDE110089.492Ailuropoda_melanoleuca
ENSPCIG00000022587CSDE19178.649ENSACIG00000015175csde110078.649Amphilophus_citrinellus
ENSPCIG00000022587CSDE110077.073ENSAOCG00000011510csde110076.280Amphiprion_ocellaris
ENSPCIG00000022587CSDE110078.901ENSAPEG00000007194csde110077.073Amphiprion_percula
ENSPCIG00000022587CSDE110075.905ENSATEG00000003864csde110075.905Anabas_testudineus
ENSPCIG00000022587CSDE110089.599ENSAPLG00000008797CSDE110089.599Anas_platyrhynchos
ENSPCIG00000022587CSDE110093.358ENSACAG00000003120CSDE110093.358Anolis_carolinensis
ENSPCIG00000022587CSDE110096.115ENSANAG00000024665CSDE110094.097Aotus_nancymaae
ENSPCIG00000022587CSDE17671.429ENSANAG00000028396-9171.429Aotus_nancymaae
ENSPCIG00000022587CSDE110078.250ENSACLG00000013296csde110078.250Astatotilapia_calliptera
ENSPCIG00000022587CSDE110075.187ENSAMXG00000007436csde110075.187Astyanax_mexicanus
ENSPCIG00000022587CSDE110095.865ENSBTAG00000000678CSDE110093.979Bos_taurus
ENSPCIG00000022587CSDE110096.241ENSCJAG00000012565CSDE110094.215Callithrix_jacchus
ENSPCIG00000022587CSDE19892.082ENSCAFG00000009618CSDE110090.385Canis_familiaris
ENSPCIG00000022587CSDE110092.231ENSCAFG00020000481CSDE110092.231Canis_lupus_dingo
ENSPCIG00000022587CSDE110095.990ENSCHIG00000017250CSDE110094.215Capra_hircus
ENSPCIG00000022587CSDE110096.241ENSTSYG00000003747CSDE110096.241Carlito_syrichta
ENSPCIG00000022587CSDE110094.479ENSCAPG00000015128CSDE110094.479Cavia_aperea
ENSPCIG00000022587CSDE110090.977ENSCPOG00000040388CSDE110090.977Cavia_porcellus
ENSPCIG00000022587CSDE110096.241ENSCCAG00000036794CSDE110096.241Cebus_capucinus
ENSPCIG00000022587CSDE19573.267ENSCCAG00000033677-9972.922Cebus_capucinus
ENSPCIG00000022587CSDE19770.824ENSCCAG00000030878-9170.824Cebus_capucinus
ENSPCIG00000022587CSDE110096.241ENSCATG00000036962CSDE110094.215Cercocebus_atys
ENSPCIG00000022587CSDE110096.115ENSCLAG00000006618CSDE110096.115Chinchilla_lanigera
ENSPCIG00000022587CSDE110096.241ENSCSAG00000001658CSDE110094.215Chlorocebus_sabaeus
ENSPCIG00000022587CSDE19997.087ENSCHOG00000000918CSDE19195.092Choloepus_hoffmanni
ENSPCIG00000022587CSDE110093.860ENSCPBG00000016547CSDE110093.860Chrysemys_picta_bellii
ENSPCIG00000022587CSDE19743.399ENSCING00000014465-9643.399Ciona_intestinalis
ENSPCIG00000022587CSDE19643.300ENSCSAVG00000008100-9843.300Ciona_savignyi
ENSPCIG00000022587CSDE110096.241ENSCANG00000035096CSDE110094.097Colobus_angolensis_palliatus
ENSPCIG00000022587CSDE19990.055ENSCANG00000031069-9990.055Colobus_angolensis_palliatus
ENSPCIG00000022587CSDE110076.441ENSCGRG00001014011-10076.441Cricetulus_griseus_chok1gshd
ENSPCIG00000022587CSDE110095.489ENSCGRG00001016833-10095.489Cricetulus_griseus_chok1gshd
ENSPCIG00000022587CSDE19795.100ENSCGRG00000002225-10095.100Cricetulus_griseus_crigri
ENSPCIG00000022587CSDE110073.563ENSCGRG00000005831-10073.563Cricetulus_griseus_crigri
ENSPCIG00000022587CSDE110075.699ENSCSEG00000002620csde110075.250Cynoglossus_semilaevis
ENSPCIG00000022587CSDE110078.375ENSCVAG00000001344csde110078.012Cyprinodon_variegatus
ENSPCIG00000022587CSDE110079.026ENSDARG00000074758csde110079.026Danio_rerio
ENSPCIG00000022587CSDE110092.240ENSDNOG00000010287-9491.905Dasypus_novemcinctus
ENSPCIG00000022587CSDE110094.987ENSDORG00000011609Csde110094.987Dipodomys_ordii
ENSPCIG00000022587CSDE19750.207FBgn0263352Unr7749.197Drosophila_melanogaster
ENSPCIG00000022587CSDE17667.550ENSETEG00000007109-9967.550Echinops_telfairi
ENSPCIG00000022587CSDE19494.220ENSETEG00000002491-8094.220Echinops_telfairi
ENSPCIG00000022587CSDE19972.146ENSETEG00000013678-9972.146Echinops_telfairi
ENSPCIG00000022587CSDE19080.845ENSETEG00000006280-10080.845Echinops_telfairi
ENSPCIG00000022587CSDE19956.143ENSEBUG00000008647csde19954.405Eptatretus_burgeri
ENSPCIG00000022587CSDE110096.366ENSEASG00005006284CSDE110096.366Equus_asinus_asinus
ENSPCIG00000022587CSDE110096.366ENSECAG00000020885CSDE110096.366Equus_caballus
ENSPCIG00000022587CSDE19398.953ENSEEUG00000006286CSDE17498.953Erinaceus_europaeus
ENSPCIG00000022587CSDE110075.604ENSELUG00000015507csde110074.502Esox_lucius
ENSPCIG00000022587CSDE110096.241ENSFCAG00000029266CSDE110094.333Felis_catus
ENSPCIG00000022587CSDE110093.233ENSFALG00000003407CSDE110093.233Ficedula_albicollis
ENSPCIG00000022587CSDE110095.865ENSFDAG00000007882CSDE110095.865Fukomys_damarensis
ENSPCIG00000022587CSDE110078.527ENSFHEG00000010799csde110078.527Fundulus_heteroclitus
ENSPCIG00000022587CSDE19977.847ENSGMOG00000012731csde110077.847Gadus_morhua
ENSPCIG00000022587CSDE19893.223ENSGALG00000002139CSDE19893.223Gallus_gallus
ENSPCIG00000022587CSDE19374.672ENSGAFG00000005241csde19574.672Gambusia_affinis
ENSPCIG00000022587CSDE19978.875ENSGACG00000004544csde110078.875Gasterosteus_aculeatus
ENSPCIG00000022587CSDE110093.985ENSGAGG00000017685CSDE110093.985Gopherus_agassizii
ENSPCIG00000022587CSDE110096.241ENSGGOG00000002164CSDE110094.215Gorilla_gorilla
ENSPCIG00000022587CSDE110077.612ENSHBUG00000020315csde110075.625Haplochromis_burtoni
ENSPCIG00000022587CSDE110079.825ENSHGLG00000019549-10079.825Heterocephalus_glaber_female
ENSPCIG00000022587CSDE110082.957ENSHGLG00000003829-10082.957Heterocephalus_glaber_female
ENSPCIG00000022587CSDE110086.341ENSHGLG00000009620-10086.591Heterocephalus_glaber_female
ENSPCIG00000022587CSDE19686.860ENSHGLG00000010039-10086.860Heterocephalus_glaber_female
ENSPCIG00000022587CSDE19986.295ENSHGLG00000008555-9986.295Heterocephalus_glaber_female
ENSPCIG00000022587CSDE19980.429ENSHGLG00000007471-9880.429Heterocephalus_glaber_female
ENSPCIG00000022587CSDE19977.290ENSHGLG00000000650-9977.290Heterocephalus_glaber_female
ENSPCIG00000022587CSDE110078.446ENSHGLG00100012072-10079.871Heterocephalus_glaber_male
ENSPCIG00000022587CSDE19779.065ENSHGLG00100004833-10079.065Heterocephalus_glaber_male
ENSPCIG00000022587CSDE110074.687ENSHGLG00100001846-10074.687Heterocephalus_glaber_male
ENSPCIG00000022587CSDE19978.030ENSHGLG00100007287-9878.030Heterocephalus_glaber_male
ENSPCIG00000022587CSDE19477.941ENSHGLG00100004195-10077.941Heterocephalus_glaber_male
ENSPCIG00000022587CSDE19686.637ENSHGLG00100006910-10086.637Heterocephalus_glaber_male
ENSPCIG00000022587CSDE110095.990ENSHGLG00100019438-10095.990Heterocephalus_glaber_male
ENSPCIG00000022587CSDE19981.727ENSHGLG00100002245-9981.727Heterocephalus_glaber_male
ENSPCIG00000022587CSDE110077.125ENSHCOG00000004158csde110074.500Hippocampus_comes
ENSPCIG00000022587CSDE110075.062ENSIPUG00000000355csde110075.062Ictalurus_punctatus
ENSPCIG00000022587CSDE110077.916ENSSTOG00000030994-10077.916Ictidomys_tridecemlineatus
ENSPCIG00000022587CSDE19292.308ENSSTOG00000032722-9992.308Ictidomys_tridecemlineatus
ENSPCIG00000022587CSDE110095.363ENSJJAG00000019571Csde110095.363Jaculus_jaculus
ENSPCIG00000022587CSDE110077.764ENSKMAG00000005685csde110077.379Kryptolebias_marmoratus
ENSPCIG00000022587CSDE110076.585ENSLBEG00000014770csde110075.780Labrus_bergylta
ENSPCIG00000022587CSDE110081.638ENSLACG00000018452CSDE19681.197Latimeria_chalumnae
ENSPCIG00000022587CSDE110081.477ENSLOCG00000010413csde19581.628Lepisosteus_oculatus
ENSPCIG00000022587CSDE110091.228ENSLAFG00000007150CSDE19691.228Loxodonta_africana
ENSPCIG00000022587CSDE110096.241ENSMFAG00000003674CSDE110094.215Macaca_fascicularis
ENSPCIG00000022587CSDE110096.241ENSMMUG00000001974CSDE110094.215Macaca_mulatta
ENSPCIG00000022587CSDE110096.241ENSMNEG00000045247CSDE110094.215Macaca_nemestrina
ENSPCIG00000022587CSDE110095.990ENSMLEG00000038673CSDE110093.979Mandrillus_leucophaeus
ENSPCIG00000022587CSDE110077.805ENSMAMG00000008821csde110076.904Mastacembelus_armatus
ENSPCIG00000022587CSDE110078.250ENSMZEG00005021675csde110075.625Maylandia_zebra
ENSPCIG00000022587CSDE19893.350ENSMGAG00000016381CSDE19893.350Meleagris_gallopavo
ENSPCIG00000022587CSDE110095.489ENSMAUG00000014031Csde110095.489Mesocricetus_auratus
ENSPCIG00000022587CSDE110095.614ENSMICG00000002050CSDE19995.536Microcebus_murinus
ENSPCIG00000022587CSDE110095.489ENSMOCG00000018960Csde110095.489Microtus_ochrogaster
ENSPCIG00000022587CSDE110076.280ENSMMOG00000015075csde110076.280Mola_mola
ENSPCIG00000022587CSDE110099.624ENSMODG00000004685CSDE110099.624Monodelphis_domestica
ENSPCIG00000022587CSDE110076.155ENSMALG00000007132csde110076.155Monopterus_albus
ENSPCIG00000022587CSDE110095.363MGP_CAROLIEiJ_G0025444Csde110095.363Mus_caroli
ENSPCIG00000022587CSDE110095.363ENSMUSG00000068823Csde110095.363Mus_musculus
ENSPCIG00000022587CSDE110095.614MGP_PahariEiJ_G0026888Csde110095.614Mus_pahari
ENSPCIG00000022587CSDE110095.614MGP_SPRETEiJ_G0026394Csde110095.614Mus_spretus
ENSPCIG00000022587CSDE19896.169ENSMPUG00000005753CSDE19996.169Mustela_putorius_furo
ENSPCIG00000022587CSDE110091.604ENSMLUG00000005681CSDE110089.847Myotis_lucifugus
ENSPCIG00000022587CSDE110095.489ENSNGAG00000021929Csde110095.489Nannospalax_galili
ENSPCIG00000022587CSDE19768.151ENSNGAG00000012599-10068.151Nannospalax_galili
ENSPCIG00000022587CSDE110075.625ENSNBRG00000020808csde110075.625Neolamprologus_brichardi
ENSPCIG00000022587CSDE110096.115ENSNLEG00000004842CSDE110094.097Nomascus_leucogenys
ENSPCIG00000022587CSDE19899.675ENSMEUG00000002677CSDE19699.675Notamacropus_eugenii
ENSPCIG00000022587CSDE19897.087ENSOPRG00000005002CSDE17697.087Ochotona_princeps
ENSPCIG00000022587CSDE110095.614ENSODEG00000007383-10095.614Octodon_degus
ENSPCIG00000022587CSDE19765.487ENSODEG00000005979-9865.487Octodon_degus
ENSPCIG00000022587CSDE110076.435ENSONIG00000009309csde110076.435Oreochromis_niloticus
ENSPCIG00000022587CSDE110081.920ENSOANG00000003346-10081.920Ornithorhynchus_anatinus
ENSPCIG00000022587CSDE110095.739ENSOCUG00000016438CSDE110093.506Oryctolagus_cuniculus
ENSPCIG00000022587CSDE110076.435ENSORLG00000000707csde110076.435Oryzias_latipes
ENSPCIG00000022587CSDE110078.250ENSORLG00020005148csde110076.435Oryzias_latipes_hni
ENSPCIG00000022587CSDE110078.250ENSORLG00015019415csde110076.435Oryzias_latipes_hsok
ENSPCIG00000022587CSDE110078.527ENSOMEG00000015656csde110076.707Oryzias_melastigma
ENSPCIG00000022587CSDE110092.356ENSOGAG00000012127CSDE110090.673Otolemur_garnettii
ENSPCIG00000022587CSDE110092.105ENSOARG00000020034CSDE110090.555Ovis_aries
ENSPCIG00000022587CSDE110096.241ENSPPAG00000025861CSDE110094.215Pan_paniscus
ENSPCIG00000022587CSDE110096.241ENSPPRG00000006747CSDE110094.333Panthera_pardus
ENSPCIG00000022587CSDE110096.241ENSPTIG00000015468CSDE110096.241Panthera_tigris_altaica
ENSPCIG00000022587CSDE110096.241ENSPTRG00000033721CSDE110096.241Pan_troglodytes
ENSPCIG00000022587CSDE110096.241ENSPANG00000018873CSDE110094.215Papio_anubis
ENSPCIG00000022587CSDE110075.875ENSPKIG00000009459csde110075.875Paramormyrops_kingsleyae
ENSPCIG00000022587CSDE19696.681ENSPSIG00000003823CSDE19696.681Pelodiscus_sinensis
ENSPCIG00000022587CSDE110075.780ENSPMGG00000000772csde110075.780Periophthalmus_magnuspinnatus
ENSPCIG00000022587CSDE110095.739ENSPEMG00000020357-10095.739Peromyscus_maniculatus_bairdii
ENSPCIG00000022587CSDE19977.019ENSPFOG00000012664csde110077.484Poecilia_formosa
ENSPCIG00000022587CSDE19772.965ENSPLAG00000017680csde19372.965Poecilia_latipinna
ENSPCIG00000022587CSDE19872.534ENSPMEG00000005094csde19672.534Poecilia_mexicana
ENSPCIG00000022587CSDE110077.764ENSPREG00000011631csde110075.510Poecilia_reticulata
ENSPCIG00000022587CSDE110096.115ENSPPYG00000000996CSDE110096.115Pongo_abelii
ENSPCIG00000022587CSDE110098.058ENSPCAG00000014368CSDE19695.563Procavia_capensis
ENSPCIG00000022587CSDE110095.990ENSPCOG00000017893CSDE110095.990Propithecus_coquereli
ENSPCIG00000022587CSDE19081.343ENSPCOG00000008223-9081.343Propithecus_coquereli
ENSPCIG00000022587CSDE110086.466ENSPVAG00000008225CSDE110084.652Pteropus_vampyrus
ENSPCIG00000022587CSDE110077.612ENSPNYG00000013745csde110075.625Pundamilia_nyererei
ENSPCIG00000022587CSDE110078.527ENSPNAG00000001958csde110075.905Pygocentrus_nattereri
ENSPCIG00000022587CSDE110095.489ENSRNOG00000061058Csde110095.489Rattus_norvegicus
ENSPCIG00000022587CSDE110092.356ENSRBIG00000038088-9994.240Rhinopithecus_bieti
ENSPCIG00000022587CSDE110090.613ENSRBIG00000038966-10088.915Rhinopithecus_bieti
ENSPCIG00000022587CSDE110096.241ENSRROG00000043101CSDE110094.215Rhinopithecus_roxellana
ENSPCIG00000022587CSDE110096.241ENSSBOG00000035592CSDE110094.215Saimiri_boliviensis_boliviensis
ENSPCIG00000022587CSDE110096.222ENSSHAG00000009831CSDE110096.222Sarcophilus_harrisii
ENSPCIG00000022587CSDE110077.985ENSSFOG00015007498csde110078.234Scleropages_formosus
ENSPCIG00000022587CSDE110077.073ENSSMAG00000007203csde110077.073Scophthalmus_maximus
ENSPCIG00000022587CSDE110076.829ENSSDUG00000015380csde110076.030Seriola_dumerili
ENSPCIG00000022587CSDE110078.652ENSSLDG00000008819csde110078.652Seriola_lalandi_dorsalis
ENSPCIG00000022587CSDE110091.980ENSSARG00000000738CSDE19691.739Sorex_araneus
ENSPCIG00000022587CSDE110093.358ENSSPUG00000008714CSDE110093.358Sphenodon_punctatus
ENSPCIG00000022587CSDE110079.151ENSSPAG00000000716csde110076.529Stegastes_partitus
ENSPCIG00000022587CSDE110096.241ENSSSCG00000006752CSDE110094.333Sus_scrofa
ENSPCIG00000022587CSDE110092.375ENSTGUG00000000972CSDE110092.375Taeniopygia_guttata
ENSPCIG00000022587CSDE110073.250ENSTRUG00000007996csde110073.250Takifugu_rubripes
ENSPCIG00000022587CSDE19383.270ENSTNIG00000010878csde110083.270Tetraodon_nigroviridis
ENSPCIG00000022587CSDE19397.436ENSTBEG00000011880-6797.436Tupaia_belangeri
ENSPCIG00000022587CSDE110091.604ENSTTRG00000015583CSDE110089.847Tursiops_truncatus
ENSPCIG00000022587CSDE19086.810ENSUAMG00000024289-9986.810Ursus_americanus
ENSPCIG00000022587CSDE18995.440ENSUAMG00000021779-9995.440Ursus_americanus
ENSPCIG00000022587CSDE110085.213ENSUMAG00000009720-9884.913Ursus_maritimus
ENSPCIG00000022587CSDE19795.724ENSUMAG00000011714-9995.724Ursus_maritimus
ENSPCIG00000022587CSDE110097.653ENSVPAG00000000749CSDE18597.653Vicugna_pacos
ENSPCIG00000022587CSDE19095.614ENSVVUG00000009890CSDE19495.614Vulpes_vulpes
ENSPCIG00000022587CSDE110087.516ENSXETG00000021448csde110087.516Xenopus_tropicalis
ENSPCIG00000022587CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSPCIG00000022587CSDE110079.026ENSXMAG00000009080csde110076.820Xiphophorus_maculatus

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