EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000022692 (Gene tree)
Gene ID: 110215271
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 21813 bases
Position: chrFUWB01003799.1:79585-101397
Accession: 10765
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000030500	PRP21_like_P	PF12230.8	2.6e-51	1	1
ENSPCIP00000030500	Surp	PF01805.20	8.7e-46	1	2
ENSPCIP00000030500	Surp	PF01805.20	8.7e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000037527	SF3A1-201	2376	-	ENSPCIP00000030500	791 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000022692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000022692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000022692	SF3A1	100	97.226	ENSG00000099995	SF3A1	100	97.226	Homo_sapiens
ENSPCIG00000022692	SF3A1	100	83.627	ENSAPOG00000020465	sf3a1	97	84.967	Acanthochromis_polyacanthus
ENSPCIG00000022692	SF3A1	100	97.107	ENSAMEG00000007737	SF3A1	100	97.107	Ailuropoda_melanoleuca
ENSPCIG00000022692	SF3A1	100	84.005	ENSACIG00000020672	sf3a1	98	85.528	Amphilophus_citrinellus
ENSPCIG00000022692	SF3A1	100	83.375	ENSAOCG00000003060	sf3a1	97	84.837	Amphiprion_ocellaris
ENSPCIG00000022692	SF3A1	100	83.501	ENSAPEG00000010735	sf3a1	97	84.967	Amphiprion_percula
ENSPCIG00000022692	SF3A1	97	85.956	ENSATEG00000021201	sf3a1	97	84.685	Anabas_testudineus
ENSPCIG00000022692	SF3A1	95	94.709	ENSAPLG00000009057	SF3A1	99	93.774	Anas_platyrhynchos
ENSPCIG00000022692	SF3A1	100	86.436	ENSACAG00000009415	SF3A1	100	87.176	Anolis_carolinensis
ENSPCIG00000022692	SF3A1	100	97.856	ENSANAG00000032045	SF3A1	100	97.856	Aotus_nancymaae
ENSPCIG00000022692	SF3A1	100	84.237	ENSACLG00000012622	sf3a1	98	85.901	Astatotilapia_calliptera
ENSPCIG00000022692	SF3A1	99	83.038	ENSAMXG00000005382	sf3a1	99	84.170	Astyanax_mexicanus
ENSPCIG00000022692	SF3A1	100	97.730	ENSBTAG00000003390	SF3A1	100	97.730	Bos_taurus
ENSPCIG00000022692	SF3A1	84	43.423	WBGene00004188	prp-21	97	41.958	Caenorhabditis_elegans
ENSPCIG00000022692	SF3A1	100	97.856	ENSCJAG00000010370	SF3A1	100	97.856	Callithrix_jacchus
ENSPCIG00000022692	SF3A1	100	97.604	ENSCAFG00000012559	SF3A1	100	97.604	Canis_familiaris
ENSPCIG00000022692	SF3A1	100	97.604	ENSCAFG00020000838	SF3A1	100	97.604	Canis_lupus_dingo
ENSPCIG00000022692	SF3A1	100	97.604	ENSCHIG00000018642	SF3A1	100	97.604	Capra_hircus
ENSPCIG00000022692	SF3A1	100	97.730	ENSTSYG00000004739	SF3A1	100	97.730	Carlito_syrichta
ENSPCIG00000022692	SF3A1	94	79.867	ENSCAPG00000015414	SF3A1	98	79.600	Cavia_aperea
ENSPCIG00000022692	SF3A1	100	97.604	ENSCPOG00000014589	SF3A1	100	97.604	Cavia_porcellus
ENSPCIG00000022692	SF3A1	100	97.856	ENSCCAG00000032006	SF3A1	100	97.856	Cebus_capucinus
ENSPCIG00000022692	SF3A1	100	97.604	ENSCATG00000029241	SF3A1	100	97.604	Cercocebus_atys
ENSPCIG00000022692	SF3A1	100	97.100	ENSCLAG00000006508	SF3A1	100	97.100	Chinchilla_lanigera
ENSPCIG00000022692	SF3A1	100	97.478	ENSCSAG00000009470	SF3A1	100	97.478	Chlorocebus_sabaeus
ENSPCIG00000022692	SF3A1	61	98.507	ENSCHOG00000005201	SF3A1	69	98.507	Choloepus_hoffmanni
ENSPCIG00000022692	SF3A1	100	91.667	ENSCPBG00000007595	SF3A1	100	91.414	Chrysemys_picta_bellii
ENSPCIG00000022692	SF3A1	94	52.185	ENSCING00000008526	-	66	58.046	Ciona_intestinalis
ENSPCIG00000022692	SF3A1	96	51.742	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSPCIG00000022692	SF3A1	100	97.478	ENSCANG00000033564	SF3A1	100	97.478	Colobus_angolensis_palliatus
ENSPCIG00000022692	SF3A1	100	96.974	ENSCGRG00001008933	Sf3a1	100	96.974	Cricetulus_griseus_chok1gshd
ENSPCIG00000022692	SF3A1	100	96.974	ENSCGRG00000006127	Sf3a1	100	96.974	Cricetulus_griseus_crigri
ENSPCIG00000022692	SF3A1	100	81.509	ENSCSEG00000010792	sf3a1	97	82.245	Cynoglossus_semilaevis
ENSPCIG00000022692	SF3A1	100	82.997	ENSCVAG00000004560	sf3a1	97	84.094	Cyprinodon_variegatus
ENSPCIG00000022692	SF3A1	100	83.627	ENSDARG00000041887	sf3a1	98	85.046	Danio_rerio
ENSPCIG00000022692	SF3A1	100	97.107	ENSDNOG00000010629	SF3A1	100	97.107	Dasypus_novemcinctus
ENSPCIG00000022692	SF3A1	100	97.856	ENSDORG00000005613	Sf3a1	100	97.856	Dipodomys_ordii
ENSPCIG00000022692	SF3A1	80	61.654	FBgn0266917	Sf3a1	83	61.397	Drosophila_melanogaster
ENSPCIG00000022692	SF3A1	88	95.014	ENSETEG00000017194	SF3A1	100	95.014	Echinops_telfairi
ENSPCIG00000022692	SF3A1	97	68.109	ENSEBUG00000001285	sf3a1	95	67.702	Eptatretus_burgeri
ENSPCIG00000022692	SF3A1	100	97.982	ENSEASG00005010254	SF3A1	100	97.982	Equus_asinus_asinus
ENSPCIG00000022692	SF3A1	100	97.982	ENSECAG00000023962	SF3A1	100	97.982	Equus_caballus
ENSPCIG00000022692	SF3A1	73	92.486	ENSEEUG00000003159	SF3A1	83	92.486	Erinaceus_europaeus
ENSPCIG00000022692	SF3A1	100	82.434	ENSELUG00000022578	sf3a1	99	82.821	Esox_lucius
ENSPCIG00000022692	SF3A1	100	97.730	ENSFCAG00000011932	SF3A1	100	97.730	Felis_catus
ENSPCIG00000022692	SF3A1	95	93.775	ENSFALG00000006944	SF3A1	100	92.172	Ficedula_albicollis
ENSPCIG00000022692	SF3A1	100	97.352	ENSFDAG00000009560	SF3A1	100	97.352	Fukomys_damarensis
ENSPCIG00000022692	SF3A1	100	83.501	ENSFHEG00000010866	sf3a1	97	84.485	Fundulus_heteroclitus
ENSPCIG00000022692	SF3A1	100	81.439	ENSGMOG00000016024	sf3a1	99	82.065	Gadus_morhua
ENSPCIG00000022692	SF3A1	95	94.702	ENSGALG00000007937	SF3A1	100	92.677	Gallus_gallus
ENSPCIG00000022692	SF3A1	100	82.872	ENSGAFG00000009111	sf3a1	97	84.314	Gambusia_affinis
ENSPCIG00000022692	SF3A1	100	81.944	ENSGACG00000011893	sf3a1	97	82.660	Gasterosteus_aculeatus
ENSPCIG00000022692	SF3A1	96	91.963	ENSGAGG00000000762	SF3A1	99	91.700	Gopherus_agassizii
ENSPCIG00000022692	SF3A1	100	97.226	ENSGGOG00000012631	SF3A1	100	97.226	Gorilla_gorilla
ENSPCIG00000022692	SF3A1	100	84.237	ENSHBUG00000015795	sf3a1	98	85.901	Haplochromis_burtoni
ENSPCIG00000022692	SF3A1	100	97.604	ENSHGLG00000007907	SF3A1	100	97.604	Heterocephalus_glaber_female
ENSPCIG00000022692	SF3A1	100	97.604	ENSHGLG00100013799	SF3A1	100	97.604	Heterocephalus_glaber_male
ENSPCIG00000022692	SF3A1	100	80.629	ENSHCOG00000015423	sf3a1	99	80.903	Hippocampus_comes
ENSPCIG00000022692	SF3A1	96	82.399	ENSIPUG00000002470	sf3a1	98	81.877	Ictalurus_punctatus
ENSPCIG00000022692	SF3A1	100	97.982	ENSSTOG00000013892	SF3A1	100	97.982	Ictidomys_tridecemlineatus
ENSPCIG00000022692	SF3A1	100	97.733	ENSJJAG00000022566	Sf3a1	100	97.733	Jaculus_jaculus
ENSPCIG00000022692	SF3A1	100	82.746	ENSKMAG00000002400	sf3a1	98	83.528	Kryptolebias_marmoratus
ENSPCIG00000022692	SF3A1	100	82.494	ENSLBEG00000022974	sf3a1	97	83.529	Labrus_bergylta
ENSPCIG00000022692	SF3A1	100	85.176	ENSLACG00000003565	SF3A1	99	86.957	Latimeria_chalumnae
ENSPCIG00000022692	SF3A1	100	85.050	ENSLOCG00000008251	sf3a1	97	86.996	Lepisosteus_oculatus
ENSPCIG00000022692	SF3A1	100	97.604	ENSLAFG00000000448	SF3A1	100	97.604	Loxodonta_africana
ENSPCIG00000022692	SF3A1	97	62.354	ENSLAFG00000026032	-	97	61.578	Loxodonta_africana
ENSPCIG00000022692	SF3A1	100	97.352	ENSMFAG00000031979	SF3A1	100	97.352	Macaca_fascicularis
ENSPCIG00000022692	SF3A1	100	97.352	ENSMMUG00000005547	SF3A1	100	97.352	Macaca_mulatta
ENSPCIG00000022692	SF3A1	100	97.226	ENSMNEG00000037229	SF3A1	100	97.226	Macaca_nemestrina
ENSPCIG00000022692	SF3A1	100	97.478	ENSMLEG00000041908	SF3A1	100	97.478	Mandrillus_leucophaeus
ENSPCIG00000022692	SF3A1	97	85.603	ENSMAMG00000006460	sf3a1	96	84.695	Mastacembelus_armatus
ENSPCIG00000022692	SF3A1	100	84.237	ENSMZEG00005009633	sf3a1	98	85.901	Maylandia_zebra
ENSPCIG00000022692	SF3A1	95	94.702	ENSMGAG00000001330	SF3A1	99	93.766	Meleagris_gallopavo
ENSPCIG00000022692	SF3A1	100	89.660	ENSMAUG00000020317	Sf3a1	100	89.407	Mesocricetus_auratus
ENSPCIG00000022692	SF3A1	100	97.478	ENSMICG00000010038	SF3A1	100	97.478	Microcebus_murinus
ENSPCIG00000022692	SF3A1	100	97.226	ENSMOCG00000008438	Sf3a1	100	97.226	Microtus_ochrogaster
ENSPCIG00000022692	SF3A1	100	81.108	ENSMMOG00000015588	sf3a1	98	82.055	Mola_mola
ENSPCIG00000022692	SF3A1	100	99.115	ENSMODG00000009270	SF3A1	100	99.115	Monodelphis_domestica
ENSPCIG00000022692	SF3A1	100	83.733	ENSMALG00000000148	sf3a1	99	84.469	Monopterus_albus
ENSPCIG00000022692	SF3A1	100	96.595	MGP_CAROLIEiJ_G0016029	Sf3a1	100	96.595	Mus_caroli
ENSPCIG00000022692	SF3A1	100	96.595	ENSMUSG00000002129	Sf3a1	100	96.595	Mus_musculus
ENSPCIG00000022692	SF3A1	100	96.469	MGP_PahariEiJ_G0016862	Sf3a1	100	96.469	Mus_pahari
ENSPCIG00000022692	SF3A1	100	96.595	MGP_SPRETEiJ_G0016870	Sf3a1	100	96.595	Mus_spretus
ENSPCIG00000022692	SF3A1	100	97.856	ENSMPUG00000013144	SF3A1	100	97.856	Mustela_putorius_furo
ENSPCIG00000022692	SF3A1	100	97.856	ENSMLUG00000002139	SF3A1	100	97.856	Myotis_lucifugus
ENSPCIG00000022692	SF3A1	100	97.478	ENSNGAG00000016977	Sf3a1	100	97.478	Nannospalax_galili
ENSPCIG00000022692	SF3A1	100	84.237	ENSNBRG00000016642	sf3a1	96	86.561	Neolamprologus_brichardi
ENSPCIG00000022692	SF3A1	100	97.478	ENSNLEG00000003686	SF3A1	100	97.478	Nomascus_leucogenys
ENSPCIG00000022692	SF3A1	96	89.578	ENSMEUG00000008741	SF3A1	100	89.578	Notamacropus_eugenii
ENSPCIG00000022692	SF3A1	100	97.226	ENSOPRG00000016636	SF3A1	100	97.226	Ochotona_princeps
ENSPCIG00000022692	SF3A1	100	97.475	ENSODEG00000002571	SF3A1	100	97.475	Octodon_degus
ENSPCIG00000022692	SF3A1	100	82.854	ENSONIG00000010848	sf3a1	98	85.267	Oreochromis_niloticus
ENSPCIG00000022692	SF3A1	100	97.604	ENSOCUG00000007633	SF3A1	100	97.604	Oryctolagus_cuniculus
ENSPCIG00000022692	SF3A1	96	81.974	ENSORLG00000013050	sf3a1	97	83.858	Oryzias_latipes
ENSPCIG00000022692	SF3A1	96	82.917	ENSORLG00020003236	sf3a1	92	83.995	Oryzias_latipes_hni
ENSPCIG00000022692	SF3A1	100	82.472	ENSORLG00015017411	sf3a1	97	84.162	Oryzias_latipes_hsok
ENSPCIG00000022692	SF3A1	100	82.368	ENSOMEG00000013362	sf3a1	97	83.508	Oryzias_melastigma
ENSPCIG00000022692	SF3A1	100	97.352	ENSOGAG00000012931	SF3A1	100	97.352	Otolemur_garnettii
ENSPCIG00000022692	SF3A1	100	95.965	ENSOARG00000006849	SF3A1	100	95.965	Ovis_aries
ENSPCIG00000022692	SF3A1	100	96.217	ENSPPAG00000041790	SF3A1	100	96.217	Pan_paniscus
ENSPCIG00000022692	SF3A1	100	97.730	ENSPPRG00000004391	SF3A1	100	97.730	Panthera_pardus
ENSPCIG00000022692	SF3A1	97	97.789	ENSPTIG00000000844	SF3A1	99	97.789	Panthera_tigris_altaica
ENSPCIG00000022692	SF3A1	100	97.226	ENSPTRG00000014240	SF3A1	100	97.226	Pan_troglodytes
ENSPCIG00000022692	SF3A1	100	97.478	ENSPANG00000020772	SF3A1	100	97.478	Papio_anubis
ENSPCIG00000022692	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	95.094	Pelodiscus_sinensis
ENSPCIG00000022692	SF3A1	96	83.901	ENSPMGG00000023096	sf3a1	100	83.748	Periophthalmus_magnuspinnatus
ENSPCIG00000022692	SF3A1	100	97.226	ENSPEMG00000009494	Sf3a1	100	97.226	Peromyscus_maniculatus_bairdii
ENSPCIG00000022692	SF3A1	64	81.128	ENSPMAG00000007139	-	89	79.623	Petromyzon_marinus
ENSPCIG00000022692	SF3A1	100	74.559	ENSPFOG00000016768	sf3a1	93	78.367	Poecilia_formosa
ENSPCIG00000022692	SF3A1	100	82.872	ENSPLAG00000017268	sf3a1	97	84.052	Poecilia_latipinna
ENSPCIG00000022692	SF3A1	96	84.940	ENSPMEG00000019811	sf3a1	98	83.560	Poecilia_mexicana
ENSPCIG00000022692	SF3A1	100	82.997	ENSPREG00000010347	sf3a1	97	84.444	Poecilia_reticulata
ENSPCIG00000022692	SF3A1	100	97.478	ENSPPYG00000011707	SF3A1	100	97.478	Pongo_abelii
ENSPCIG00000022692	SF3A1	57	97.925	ENSPCAG00000003266	SF3A1	57	97.925	Procavia_capensis
ENSPCIG00000022692	SF3A1	100	97.604	ENSPCOG00000026630	SF3A1	100	97.604	Propithecus_coquereli
ENSPCIG00000022692	SF3A1	100	94.325	ENSPVAG00000017719	SF3A1	100	94.325	Pteropus_vampyrus
ENSPCIG00000022692	SF3A1	100	84.237	ENSPNYG00000018706	sf3a1	98	85.901	Pundamilia_nyererei
ENSPCIG00000022692	SF3A1	98	82.781	ENSPNAG00000003721	sf3a1	98	84.635	Pygocentrus_nattereri
ENSPCIG00000022692	SF3A1	100	96.847	ENSRNOG00000005218	Sf3a1	100	96.847	Rattus_norvegicus
ENSPCIG00000022692	SF3A1	100	97.478	ENSRBIG00000032167	SF3A1	100	97.478	Rhinopithecus_bieti
ENSPCIG00000022692	SF3A1	100	97.478	ENSRROG00000044908	SF3A1	100	97.478	Rhinopithecus_roxellana
ENSPCIG00000022692	SF3A1	93	97.954	ENSSBOG00000021960	SF3A1	100	98.080	Saimiri_boliviensis_boliviensis
ENSPCIG00000022692	SF3A1	97	96.628	ENSSHAG00000003666	SF3A1	98	96.628	Sarcophilus_harrisii
ENSPCIG00000022692	SF3A1	100	83.563	ENSSFOG00015004579	sf3a1	99	84.615	Scleropages_formosus
ENSPCIG00000022692	SF3A1	100	81.360	ENSSMAG00000004275	sf3a1	98	82.315	Scophthalmus_maximus
ENSPCIG00000022692	SF3A1	100	83.501	ENSSDUG00000022219	sf3a1	97	84.183	Seriola_dumerili
ENSPCIG00000022692	SF3A1	100	83.501	ENSSLDG00000012642	sf3a1	97	84.183	Seriola_lalandi_dorsalis
ENSPCIG00000022692	SF3A1	97	94.278	ENSSARG00000005960	SF3A1	99	94.278	Sorex_araneus
ENSPCIG00000022692	SF3A1	96	92.866	ENSSPUG00000018863	SF3A1	100	92.394	Sphenodon_punctatus
ENSPCIG00000022692	SF3A1	100	84.761	ENSSPAG00000011856	sf3a1	97	84.837	Stegastes_partitus
ENSPCIG00000022692	SF3A1	100	97.856	ENSSSCG00000010002	SF3A1	100	97.856	Sus_scrofa
ENSPCIG00000022692	SF3A1	95	94.716	ENSTGUG00000010547	SF3A1	100	93.782	Taeniopygia_guttata
ENSPCIG00000022692	SF3A1	100	81.234	ENSTRUG00000006118	sf3a1	97	81.830	Takifugu_rubripes
ENSPCIG00000022692	SF3A1	64	79.926	ENSTNIG00000005713	sf3a1	89	84.821	Tetraodon_nigroviridis
ENSPCIG00000022692	SF3A1	100	90.416	ENSTBEG00000012771	SF3A1	100	90.164	Tupaia_belangeri
ENSPCIG00000022692	SF3A1	100	97.481	ENSTTRG00000001535	SF3A1	100	97.481	Tursiops_truncatus
ENSPCIG00000022692	SF3A1	99	96.442	ENSUAMG00000006750	SF3A1	99	96.442	Ursus_americanus
ENSPCIG00000022692	SF3A1	99	96.556	ENSUMAG00000016665	SF3A1	99	96.556	Ursus_maritimus
ENSPCIG00000022692	SF3A1	100	97.604	ENSVVUG00000003075	SF3A1	100	97.604	Vulpes_vulpes
ENSPCIG00000022692	SF3A1	100	86.432	ENSXETG00000016144	sf3a1	97	88.036	Xenopus_tropicalis
ENSPCIG00000022692	SF3A1	100	82.620	ENSXCOG00000015653	sf3a1	97	84.052	Xiphophorus_couchianus
ENSPCIG00000022692	SF3A1	100	82.746	ENSXMAG00000002753	sf3a1	97	84.183	Xiphophorus_maculatus