EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000023050 (Gene tree)
Gene ID: 110209809
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 40210 bases
Position: chrFUWB01000775.1:1063006-1103215
Accession: 110209809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000031009	ResIII	PF04851.15	7.1e-26	1	2
ENSPCIP00000031009	ResIII	PF04851.15	7.1e-26	2	2
ENSPCIP00000031009	DEAD	PF00270.29	9.7e-53	1	2
ENSPCIP00000031009	DEAD	PF00270.29	9.7e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000038139	SNRNP200-201	6992	XM_020988505	ENSPCIP00000031009	2136 (aa)	XP_020844164	UPI000A282E4E

Gene Model

Click here to download ENSPCIG00000023050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000023050's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000023050	SNRNP200	74	32.035	ENSPCIG00000014233	HFM1	56	32.035
ENSPCIG00000023050	SNRNP200	86	42.369	ENSPCIG00000017288	ASCC3	80	44.746

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000023050	SNRNP200	100	98.970	ENSG00000144028	SNRNP200	100	98.970	Homo_sapiens
ENSPCIG00000023050	SNRNP200	99	90.747	ENSAPOG00000010223	snrnp200	99	90.684	Acanthochromis_polyacanthus
ENSPCIG00000023050	SNRNP200	100	99.017	ENSAMEG00000008996	SNRNP200	100	99.017	Ailuropoda_melanoleuca
ENSPCIG00000023050	SNRNP200	97	90.150	ENSACIG00000001764	snrnp200	98	90.150	Amphilophus_citrinellus
ENSPCIG00000023050	SNRNP200	99	90.700	ENSAOCG00000024593	snrnp200	100	89.989	Amphiprion_ocellaris
ENSPCIG00000023050	SNRNP200	97	90.043	ENSAPEG00000012554	snrnp200	100	90.043	Amphiprion_percula
ENSPCIG00000023050	SNRNP200	99	90.653	ENSATEG00000022522	snrnp200	99	90.590	Anabas_testudineus
ENSPCIG00000023050	SNRNP200	99	97.548	ENSAPLG00000004313	SNRNP200	100	97.548	Anas_platyrhynchos
ENSPCIG00000023050	SNRNP200	99	97.381	ENSACAG00000000434	SNRNP200	100	97.381	Anolis_carolinensis
ENSPCIG00000023050	SNRNP200	100	94.403	ENSANAG00000036625	SNRNP200	100	94.823	Aotus_nancymaae
ENSPCIG00000023050	SNRNP200	99	90.418	ENSACLG00000011188	snrnp200	99	90.356	Astatotilapia_calliptera
ENSPCIG00000023050	SNRNP200	99	90.418	ENSAMXG00000005684	snrnp200	99	90.356	Astyanax_mexicanus
ENSPCIG00000023050	SNRNP200	100	98.502	ENSBTAG00000000848	SNRNP200	100	98.502	Bos_taurus
ENSPCIG00000023050	SNRNP200	100	98.923	ENSCJAG00000007514	SNRNP200	100	98.923	Callithrix_jacchus
ENSPCIG00000023050	SNRNP200	100	98.227	ENSCAFG00020019979	SNRNP200	100	98.950	Canis_lupus_dingo
ENSPCIG00000023050	SNRNP200	100	98.689	ENSCHIG00000020611	SNRNP200	100	98.689	Capra_hircus
ENSPCIG00000023050	SNRNP200	100	99.017	ENSTSYG00000010467	SNRNP200	100	99.017	Carlito_syrichta
ENSPCIG00000023050	SNRNP200	99	98.496	ENSCAPG00000017234	SNRNP200	99	98.496	Cavia_aperea
ENSPCIG00000023050	SNRNP200	100	98.783	ENSCPOG00000006776	SNRNP200	100	98.783	Cavia_porcellus
ENSPCIG00000023050	SNRNP200	100	98.923	ENSCCAG00000033962	SNRNP200	100	98.923	Cebus_capucinus
ENSPCIG00000023050	SNRNP200	100	98.970	ENSCATG00000015790	SNRNP200	100	98.970	Cercocebus_atys
ENSPCIG00000023050	SNRNP200	100	98.736	ENSCLAG00000004116	SNRNP200	100	98.736	Chinchilla_lanigera
ENSPCIG00000023050	SNRNP200	100	98.923	ENSCSAG00000017369	SNRNP200	100	98.923	Chlorocebus_sabaeus
ENSPCIG00000023050	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSPCIG00000023050	SNRNP200	100	97.849	ENSCPBG00000022571	SNRNP200	99	100.000	Chrysemys_picta_bellii
ENSPCIG00000023050	SNRNP200	99	76.740	ENSCING00000005082	-	99	76.880	Ciona_intestinalis
ENSPCIG00000023050	SNRNP200	100	93.461	ENSCANG00000033932	SNRNP200	100	98.855	Colobus_angolensis_palliatus
ENSPCIG00000023050	SNRNP200	100	98.830	ENSCGRG00001022610	Snrnp200	100	98.830	Cricetulus_griseus_chok1gshd
ENSPCIG00000023050	SNRNP200	100	98.270	ENSCGRG00000016472	Snrnp200	100	98.270	Cricetulus_griseus_crigri
ENSPCIG00000023050	SNRNP200	100	89.841	ENSCSEG00000016399	snrnp200	100	89.841	Cynoglossus_semilaevis
ENSPCIG00000023050	SNRNP200	100	85.768	ENSCVAG00000017631	snrnp200	99	85.768	Cyprinodon_variegatus
ENSPCIG00000023050	SNRNP200	100	90.215	ENSDARG00000077536	snrnp200	99	90.215	Danio_rerio
ENSPCIG00000023050	SNRNP200	100	97.425	ENSDNOG00000011227	SNRNP200	100	97.425	Dasypus_novemcinctus
ENSPCIG00000023050	SNRNP200	100	96.260	ENSDORG00000005861	Snrnp200	100	96.260	Dipodomys_ordii
ENSPCIG00000023050	SNRNP200	100	74.209	FBgn0263599	l(3)72Ab	99	74.115	Drosophila_melanogaster
ENSPCIG00000023050	SNRNP200	95	98.880	ENSETEG00000000162	SNRNP200	74	98.880	Echinops_telfairi
ENSPCIG00000023050	SNRNP200	83	81.076	ENSEBUG00000016524	snrnp200	95	81.076	Eptatretus_burgeri
ENSPCIG00000023050	SNRNP200	100	97.902	ENSEASG00005001884	SNRNP200	100	97.902	Equus_asinus_asinus
ENSPCIG00000023050	SNRNP200	100	99.017	ENSECAG00000019675	SNRNP200	100	99.017	Equus_caballus
ENSPCIG00000023050	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSPCIG00000023050	SNRNP200	99	90.653	ENSELUG00000018948	snrnp200	99	90.590	Esox_lucius
ENSPCIG00000023050	SNRNP200	100	99.064	ENSFCAG00000010699	SNRNP200	100	99.064	Felis_catus
ENSPCIG00000023050	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSPCIG00000023050	SNRNP200	100	98.736	ENSFDAG00000004683	SNRNP200	100	98.736	Fukomys_damarensis
ENSPCIG00000023050	SNRNP200	100	87.921	ENSFHEG00000003786	snrnp200	99	87.921	Fundulus_heteroclitus
ENSPCIG00000023050	SNRNP200	100	89.626	ENSGMOG00000004881	snrnp200	99	89.579	Gadus_morhua
ENSPCIG00000023050	SNRNP200	100	88.155	ENSGAFG00000010807	snrnp200	99	88.155	Gambusia_affinis
ENSPCIG00000023050	SNRNP200	100	89.958	ENSGACG00000011474	snrnp200	99	89.865	Gasterosteus_aculeatus
ENSPCIG00000023050	SNRNP200	95	97.789	ENSGAGG00000016069	SNRNP200	99	97.789	Gopherus_agassizii
ENSPCIG00000023050	SNRNP200	100	98.970	ENSGGOG00000005174	SNRNP200	100	98.970	Gorilla_gorilla
ENSPCIG00000023050	SNRNP200	97	87.727	ENSHBUG00000011322	snrnp200	99	87.774	Haplochromis_burtoni
ENSPCIG00000023050	SNRNP200	100	98.783	ENSHGLG00000006654	SNRNP200	100	98.783	Heterocephalus_glaber_female
ENSPCIG00000023050	SNRNP200	100	98.783	ENSHGLG00100018594	SNRNP200	100	98.783	Heterocephalus_glaber_male
ENSPCIG00000023050	SNRNP200	100	98.970	ENSSTOG00000016351	SNRNP200	100	98.970	Ictidomys_tridecemlineatus
ENSPCIG00000023050	SNRNP200	100	98.830	ENSJJAG00000023659	Snrnp200	100	98.830	Jaculus_jaculus
ENSPCIG00000023050	SNRNP200	100	87.494	ENSKMAG00000003665	snrnp200	99	87.494	Kryptolebias_marmoratus
ENSPCIG00000023050	SNRNP200	100	90.262	ENSLBEG00000021585	snrnp200	99	90.262	Labrus_bergylta
ENSPCIG00000023050	SNRNP200	82	94.722	ENSLACG00000000226	SNRNP200	99	94.722	Latimeria_chalumnae
ENSPCIG00000023050	SNRNP200	100	92.275	ENSLOCG00000015198	snrnp200	99	92.275	Lepisosteus_oculatus
ENSPCIG00000023050	SNRNP200	100	98.736	ENSLAFG00000015626	SNRNP200	100	98.736	Loxodonta_africana
ENSPCIG00000023050	SNRNP200	100	98.923	ENSMFAG00000040174	SNRNP200	100	98.923	Macaca_fascicularis
ENSPCIG00000023050	SNRNP200	100	98.923	ENSMMUG00000023261	SNRNP200	100	98.923	Macaca_mulatta
ENSPCIG00000023050	SNRNP200	100	98.876	ENSMNEG00000032398	SNRNP200	100	98.876	Macaca_nemestrina
ENSPCIG00000023050	SNRNP200	100	98.970	ENSMLEG00000019083	SNRNP200	100	98.970	Mandrillus_leucophaeus
ENSPCIG00000023050	SNRNP200	100	90.080	ENSMAMG00000007851	snrnp200	99	90.033	Mastacembelus_armatus
ENSPCIG00000023050	SNRNP200	97	87.727	ENSMZEG00005010787	snrnp200	99	87.774	Maylandia_zebra
ENSPCIG00000023050	SNRNP200	97	97.146	ENSMGAG00000001831	SNRNP200	100	97.146	Meleagris_gallopavo
ENSPCIG00000023050	SNRNP200	100	98.876	ENSMAUG00000011825	Snrnp200	100	98.876	Mesocricetus_auratus
ENSPCIG00000023050	SNRNP200	100	99.017	ENSMICG00000004710	SNRNP200	100	99.017	Microcebus_murinus
ENSPCIG00000023050	SNRNP200	100	96.301	ENSMOCG00000011814	Snrnp200	100	96.301	Microtus_ochrogaster
ENSPCIG00000023050	SNRNP200	99	88.868	ENSMMOG00000014167	snrnp200	99	88.811	Mola_mola
ENSPCIG00000023050	SNRNP200	100	99.298	ENSMODG00000008475	SNRNP200	100	99.298	Monodelphis_domestica
ENSPCIG00000023050	SNRNP200	99	90.747	ENSMALG00000001973	snrnp200	99	90.684	Monopterus_albus
ENSPCIG00000023050	SNRNP200	100	98.689	MGP_CAROLIEiJ_G0024250	Snrnp200	100	98.689	Mus_caroli
ENSPCIG00000023050	SNRNP200	100	98.736	ENSMUSG00000003660	Snrnp200	100	98.736	Mus_musculus
ENSPCIG00000023050	SNRNP200	100	98.783	MGP_PahariEiJ_G0025695	Snrnp200	100	98.783	Mus_pahari
ENSPCIG00000023050	SNRNP200	100	98.736	MGP_SPRETEiJ_G0025170	Snrnp200	100	98.736	Mus_spretus
ENSPCIG00000023050	SNRNP200	100	99.064	ENSMPUG00000008949	SNRNP200	100	99.064	Mustela_putorius_furo
ENSPCIG00000023050	SNRNP200	100	98.551	ENSMLUG00000010493	SNRNP200	100	98.551	Myotis_lucifugus
ENSPCIG00000023050	SNRNP200	100	94.944	ENSMLUG00000027511	-	100	94.944	Myotis_lucifugus
ENSPCIG00000023050	SNRNP200	100	98.970	ENSNGAG00000021993	Snrnp200	100	98.970	Nannospalax_galili
ENSPCIG00000023050	SNRNP200	90	90.261	ENSNBRG00000017960	snrnp200	98	90.261	Neolamprologus_brichardi
ENSPCIG00000023050	SNRNP200	100	94.142	ENSNLEG00000000025	SNRNP200	100	94.282	Nomascus_leucogenys
ENSPCIG00000023050	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSPCIG00000023050	SNRNP200	100	95.037	ENSOPRG00000015464	SNRNP200	100	95.037	Ochotona_princeps
ENSPCIG00000023050	SNRNP200	100	98.783	ENSODEG00000008366	SNRNP200	100	98.783	Octodon_degus
ENSPCIG00000023050	SNRNP200	99	90.371	ENSONIG00000010714	snrnp200	99	90.309	Oreochromis_niloticus
ENSPCIG00000023050	SNRNP200	100	98.830	ENSOCUG00000009864	SNRNP200	100	98.830	Oryctolagus_cuniculus
ENSPCIG00000023050	SNRNP200	100	90.215	ENSORLG00000012286	snrnp200	100	90.215	Oryzias_latipes
ENSPCIG00000023050	SNRNP200	100	90.169	ENSORLG00020004648	snrnp200	100	90.169	Oryzias_latipes_hni
ENSPCIG00000023050	SNRNP200	100	90.122	ENSORLG00015019114	snrnp200	100	90.134	Oryzias_latipes_hsok
ENSPCIG00000023050	SNRNP200	99	90.324	ENSOMEG00000011834	snrnp200	99	90.262	Oryzias_melastigma
ENSPCIG00000023050	SNRNP200	100	99.017	ENSOGAG00000006879	SNRNP200	100	99.017	Otolemur_garnettii
ENSPCIG00000023050	SNRNP200	100	97.660	ENSOARG00000013949	SNRNP200	100	97.660	Ovis_aries
ENSPCIG00000023050	SNRNP200	100	98.970	ENSPPAG00000041559	SNRNP200	100	98.970	Pan_paniscus
ENSPCIG00000023050	SNRNP200	100	99.064	ENSPPRG00000004435	SNRNP200	100	99.064	Panthera_pardus
ENSPCIG00000023050	SNRNP200	100	98.596	ENSPTIG00000006380	SNRNP200	100	98.596	Panthera_tigris_altaica
ENSPCIG00000023050	SNRNP200	100	98.970	ENSPTRG00000012230	SNRNP200	100	98.970	Pan_troglodytes
ENSPCIG00000023050	SNRNP200	100	98.923	ENSPANG00000006017	SNRNP200	100	98.923	Papio_anubis
ENSPCIG00000023050	SNRNP200	100	91.105	ENSPKIG00000014762	snrnp200	99	91.105	Paramormyrops_kingsleyae
ENSPCIG00000023050	SNRNP200	100	96.865	ENSPSIG00000008580	SNRNP200	100	96.865	Pelodiscus_sinensis
ENSPCIG00000023050	SNRNP200	100	90.407	ENSPFOG00000015110	snrnp200	99	90.407	Poecilia_formosa
ENSPCIG00000023050	SNRNP200	97	90.110	ENSPLAG00000006711	snrnp200	99	90.110	Poecilia_latipinna
ENSPCIG00000023050	SNRNP200	97	90.055	ENSPMEG00000021166	snrnp200	99	90.055	Poecilia_mexicana
ENSPCIG00000023050	SNRNP200	100	90.496	ENSPREG00000008875	snrnp200	99	90.496	Poecilia_reticulata
ENSPCIG00000023050	SNRNP200	100	98.970	ENSPPYG00000012068	SNRNP200	100	98.970	Pongo_abelii
ENSPCIG00000023050	SNRNP200	95	99.315	ENSPCAG00000008536	SNRNP200	86	99.315	Procavia_capensis
ENSPCIG00000023050	SNRNP200	100	98.970	ENSPCOG00000024608	SNRNP200	100	98.970	Propithecus_coquereli
ENSPCIG00000023050	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSPCIG00000023050	SNRNP200	99	85.948	ENSPNYG00000017476	snrnp200	99	85.901	Pundamilia_nyererei
ENSPCIG00000023050	SNRNP200	100	85.955	ENSPNAG00000010998	snrnp200	99	85.955	Pygocentrus_nattereri
ENSPCIG00000023050	SNRNP200	100	98.876	ENSRNOG00000012157	Snrnp200	100	98.876	Rattus_norvegicus
ENSPCIG00000023050	SNRNP200	100	98.970	ENSRBIG00000044690	-	100	98.970	Rhinopithecus_bieti
ENSPCIG00000023050	SNRNP200	100	98.970	ENSRROG00000037952	-	100	98.970	Rhinopithecus_roxellana
ENSPCIG00000023050	SNRNP200	100	98.923	ENSSBOG00000035471	SNRNP200	100	98.923	Saimiri_boliviensis_boliviensis
ENSPCIG00000023050	SNRNP200	97	99.952	ENSSHAG00000000758	SNRNP200	100	99.952	Sarcophilus_harrisii
ENSPCIG00000023050	SNRNP200	99	91.264	ENSSFOG00015018826	snrnp200	99	91.199	Scleropages_formosus
ENSPCIG00000023050	SNRNP200	99	90.324	ENSSMAG00000005463	snrnp200	99	90.262	Scophthalmus_maximus
ENSPCIG00000023050	SNRNP200	99	90.606	ENSSDUG00000021410	snrnp200	99	90.543	Seriola_dumerili
ENSPCIG00000023050	SNRNP200	99	90.606	ENSSLDG00000010884	snrnp200	99	90.543	Seriola_lalandi_dorsalis
ENSPCIG00000023050	SNRNP200	95	98.928	ENSSARG00000010728	SNRNP200	96	98.928	Sorex_araneus
ENSPCIG00000023050	SNRNP200	100	97.425	ENSSPUG00000003726	-	100	97.425	Sphenodon_punctatus
ENSPCIG00000023050	SNRNP200	99	90.653	ENSSPAG00000001842	snrnp200	99	90.590	Stegastes_partitus
ENSPCIG00000023050	SNRNP200	100	98.876	ENSSSCG00000008127	SNRNP200	100	98.876	Sus_scrofa
ENSPCIG00000023050	SNRNP200	99	87.607	ENSTGUG00000014475	-	100	87.607	Taeniopygia_guttata
ENSPCIG00000023050	SNRNP200	99	90.230	ENSTRUG00000001307	snrnp200	99	90.169	Takifugu_rubripes
ENSPCIG00000023050	SNRNP200	100	85.925	ENSTNIG00000004320	snrnp200	100	85.925	Tetraodon_nigroviridis
ENSPCIG00000023050	SNRNP200	82	98.485	ENSTBEG00000003329	-	67	98.485	Tupaia_belangeri
ENSPCIG00000023050	SNRNP200	100	98.689	ENSTTRG00000004983	SNRNP200	100	98.689	Tursiops_truncatus
ENSPCIG00000023050	SNRNP200	75	92.054	ENSUAMG00000008395	-	95	92.054	Ursus_americanus
ENSPCIG00000023050	SNRNP200	100	99.064	ENSUMAG00000012385	SNRNP200	100	99.064	Ursus_maritimus
ENSPCIG00000023050	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSPCIG00000023050	SNRNP200	100	98.832	ENSVVUG00000026247	SNRNP200	100	98.832	Vulpes_vulpes
ENSPCIG00000023050	SNRNP200	100	94.390	ENSXETG00000001243	snrnp200	100	94.390	Xenopus_tropicalis
ENSPCIG00000023050	SNRNP200	97	90.364	ENSXMAG00000002058	snrnp200	98	90.364	Xiphophorus_maculatus