EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000023274 (Gene tree)
Gene ID: 110217507
Gene Symbol: APEX1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 2882 bases
Position: chrFUWB01001863.1:192850-195731
Accession: 587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000031313	Exo_endo_phos	PF03372.23	2.3e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000038504	APEX1-201	2058	-	ENSPCIP00000031313	319 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000023274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000023274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000023274	APEX1	100	83.801	ENSG00000100823	APEX1	100	83.699	Homo_sapiens
ENSPCIG00000023274	APEX1	87	67.384	ENSAPOG00000017002	apex1	91	67.384	Acanthochromis_polyacanthus
ENSPCIG00000023274	APEX1	100	85.981	ENSAMEG00000005418	APEX1	100	84.326	Ailuropoda_melanoleuca
ENSPCIG00000023274	APEX1	86	70.438	ENSACIG00000010653	apex1	94	69.534	Amphilophus_citrinellus
ENSPCIG00000023274	APEX1	87	67.384	ENSAOCG00000009649	apex1	90	67.384	Amphiprion_ocellaris
ENSPCIG00000023274	APEX1	87	67.384	ENSAPEG00000021453	apex1	90	67.384	Amphiprion_percula
ENSPCIG00000023274	APEX1	86	70.696	ENSATEG00000002883	apex1	87	69.784	Anabas_testudineus
ENSPCIG00000023274	APEX1	100	66.875	ENSACAG00000008099	APEX1	88	69.643	Anolis_carolinensis
ENSPCIG00000023274	APEX1	100	84.424	ENSANAG00000030117	APEX1	100	84.013	Aotus_nancymaae
ENSPCIG00000023274	APEX1	86	69.343	ENSACLG00000018441	apex1	90	68.459	Astatotilapia_calliptera
ENSPCIG00000023274	APEX1	100	63.636	ENSAMXG00000034699	apex1	89	67.742	Astyanax_mexicanus
ENSPCIG00000023274	APEX1	100	85.981	ENSBTAG00000002745	APEX1	100	84.013	Bos_taurus
ENSPCIG00000023274	APEX1	80	45.312	WBGene00001372	exo-3	88	45.312	Caenorhabditis_elegans
ENSPCIG00000023274	APEX1	100	84.424	ENSCJAG00000009726	APEX1	100	84.326	Callithrix_jacchus
ENSPCIG00000023274	APEX1	100	84.639	ENSCAFG00000032033	APEX1	100	84.013	Canis_familiaris
ENSPCIG00000023274	APEX1	54	78.035	ENSCAFG00020023002	-	96	76.879	Canis_lupus_dingo
ENSPCIG00000023274	APEX1	100	84.639	ENSCAFG00020014377	-	100	84.013	Canis_lupus_dingo
ENSPCIG00000023274	APEX1	100	85.670	ENSCHIG00000007298	-	100	83.699	Capra_hircus
ENSPCIG00000023274	APEX1	97	70.096	ENSCHIG00000014537	-	86	74.539	Capra_hircus
ENSPCIG00000023274	APEX1	100	85.047	ENSTSYG00000034813	APEX1	100	82.759	Carlito_syrichta
ENSPCIG00000023274	APEX1	84	81.550	ENSCAPG00000016235	APEX1	91	89.831	Cavia_aperea
ENSPCIG00000023274	APEX1	100	85.047	ENSCPOG00000030909	APEX1	100	83.072	Cavia_porcellus
ENSPCIG00000023274	APEX1	100	72.586	ENSCCAG00000031931	-	100	72.414	Cebus_capucinus
ENSPCIG00000023274	APEX1	100	84.424	ENSCCAG00000033056	-	100	84.326	Cebus_capucinus
ENSPCIG00000023274	APEX1	100	84.735	ENSCATG00000015580	APEX1	100	83.699	Cercocebus_atys
ENSPCIG00000023274	APEX1	100	84.735	ENSCLAG00000001002	APEX1	100	82.759	Chinchilla_lanigera
ENSPCIG00000023274	APEX1	100	84.424	ENSCSAG00000016670	-	100	83.386	Chlorocebus_sabaeus
ENSPCIG00000023274	APEX1	100	84.424	ENSCSAG00000016685	-	100	83.386	Chlorocebus_sabaeus
ENSPCIG00000023274	APEX1	100	69.159	ENSCPBG00000009567	APEX1	100	67.398	Chrysemys_picta_bellii
ENSPCIG00000023274	APEX1	94	55.410	ENSCING00000008137	-	84	60.377	Ciona_intestinalis
ENSPCIG00000023274	APEX1	97	50.162	ENSCSAVG00000007144	-	100	53.668	Ciona_savignyi
ENSPCIG00000023274	APEX1	100	84.424	ENSCANG00000030726	APEX1	100	84.013	Colobus_angolensis_palliatus
ENSPCIG00000023274	APEX1	100	84.112	ENSCGRG00001017046	Apex1	100	82.759	Cricetulus_griseus_chok1gshd
ENSPCIG00000023274	APEX1	100	84.112	ENSCGRG00000008984	Apex1	100	82.759	Cricetulus_griseus_crigri
ENSPCIG00000023274	APEX1	99	62.025	ENSCSEG00000017499	apex1	89	66.667	Cynoglossus_semilaevis
ENSPCIG00000023274	APEX1	87	69.534	ENSCVAG00000022075	apex1	90	69.534	Cyprinodon_variegatus
ENSPCIG00000023274	APEX1	100	63.636	ENSDARG00000045843	apex1	100	63.950	Danio_rerio
ENSPCIG00000023274	APEX1	100	81.931	ENSDNOG00000042234	APEX1	95	80.251	Dasypus_novemcinctus
ENSPCIG00000023274	APEX1	100	86.604	ENSDORG00000001616	Apex1	100	84.013	Dipodomys_ordii
ENSPCIG00000023274	APEX1	100	86.604	ENSETEG00000004855	-	100	84.639	Echinops_telfairi
ENSPCIG00000023274	APEX1	75	63.180	ENSEBUG00000000622	-	98	58.712	Eptatretus_burgeri
ENSPCIG00000023274	APEX1	100	86.293	ENSEASG00005017489	APEX1	74	84.326	Equus_asinus_asinus
ENSPCIG00000023274	APEX1	100	86.293	ENSECAG00000022325	APEX1	82	84.326	Equus_caballus
ENSPCIG00000023274	APEX1	86	88.727	ENSEEUG00000012569	APEX1	95	88.645	Erinaceus_europaeus
ENSPCIG00000023274	APEX1	86	68.613	ENSELUG00000021706	apex1	89	67.742	Esox_lucius
ENSPCIG00000023274	APEX1	100	85.670	ENSFCAG00000030869	APEX1	100	83.699	Felis_catus
ENSPCIG00000023274	APEX1	100	85.047	ENSFDAG00000006120	APEX1	100	83.072	Fukomys_damarensis
ENSPCIG00000023274	APEX1	87	69.534	ENSFHEG00000009031	apex1	75	69.534	Fundulus_heteroclitus
ENSPCIG00000023274	APEX1	99	61.830	ENSGMOG00000007943	apex1	88	66.058	Gadus_morhua
ENSPCIG00000023274	APEX1	87	69.534	ENSGAFG00000005311	apex1	90	69.534	Gambusia_affinis
ENSPCIG00000023274	APEX1	87	67.742	ENSGACG00000019497	apex1	99	68.421	Gasterosteus_aculeatus
ENSPCIG00000023274	APEX1	100	68.536	ENSGAGG00000014999	APEX1	100	66.771	Gopherus_agassizii
ENSPCIG00000023274	APEX1	100	84.424	ENSGGOG00000002128	APEX1	100	84.326	Gorilla_gorilla
ENSPCIG00000023274	APEX1	86	69.343	ENSHBUG00000005894	apex1	90	68.459	Haplochromis_burtoni
ENSPCIG00000023274	APEX1	100	85.981	ENSHGLG00000002848	APEX1	100	84.013	Heterocephalus_glaber_female
ENSPCIG00000023274	APEX1	100	85.981	ENSHGLG00100017878	APEX1	100	84.013	Heterocephalus_glaber_male
ENSPCIG00000023274	APEX1	99	63.009	ENSHCOG00000009961	apex1	89	68.459	Hippocampus_comes
ENSPCIG00000023274	APEX1	100	66.250	ENSIPUG00000005799	apex1	89	69.534	Ictalurus_punctatus
ENSPCIG00000023274	APEX1	100	84.735	ENSSTOG00000010096	APEX1	100	82.759	Ictidomys_tridecemlineatus
ENSPCIG00000023274	APEX1	89	79.649	ENSJJAG00000020465	-	91	79.505	Jaculus_jaculus
ENSPCIG00000023274	APEX1	100	84.735	ENSJJAG00000012067	-	100	83.072	Jaculus_jaculus
ENSPCIG00000023274	APEX1	100	75.312	ENSJJAG00000003660	-	100	74.922	Jaculus_jaculus
ENSPCIG00000023274	APEX1	87	69.534	ENSKMAG00000021171	apex1	90	69.534	Kryptolebias_marmoratus
ENSPCIG00000023274	APEX1	87	67.025	ENSLBEG00000010248	apex1	90	67.025	Labrus_bergylta
ENSPCIG00000023274	APEX1	100	66.458	ENSLACG00000008617	APEX1	100	63.580	Latimeria_chalumnae
ENSPCIG00000023274	APEX1	100	66.562	ENSLOCG00000015516	apex1	88	70.968	Lepisosteus_oculatus
ENSPCIG00000023274	APEX1	100	84.062	ENSLAFG00000021872	APEX1	100	83.699	Loxodonta_africana
ENSPCIG00000023274	APEX1	100	84.735	ENSMFAG00000002565	APEX1	100	83.699	Macaca_fascicularis
ENSPCIG00000023274	APEX1	100	84.735	ENSMMUG00000048039	APEX1	100	83.699	Macaca_mulatta
ENSPCIG00000023274	APEX1	100	84.735	ENSMNEG00000036944	APEX1	100	83.699	Macaca_nemestrina
ENSPCIG00000023274	APEX1	100	84.735	ENSMLEG00000042125	APEX1	100	83.699	Mandrillus_leucophaeus
ENSPCIG00000023274	APEX1	87	69.534	ENSMAMG00000023526	apex1	90	69.534	Mastacembelus_armatus
ENSPCIG00000023274	APEX1	86	69.343	ENSMZEG00005014187	apex1	90	68.459	Maylandia_zebra
ENSPCIG00000023274	APEX1	100	83.125	ENSMAUG00000013994	Apex1	100	81.818	Mesocricetus_auratus
ENSPCIG00000023274	APEX1	100	85.358	ENSMICG00000043554	APEX1	100	83.386	Microcebus_murinus
ENSPCIG00000023274	APEX1	100	85.670	ENSMOCG00000013721	Apex1	100	84.326	Microtus_ochrogaster
ENSPCIG00000023274	APEX1	91	61.613	ENSMMOG00000010031	apex1	87	66.071	Mola_mola
ENSPCIG00000023274	APEX1	100	89.375	ENSMODG00000007125	APEX1	100	89.375	Monodelphis_domestica
ENSPCIG00000023274	APEX1	87	63.441	ENSMALG00000011699	apex1	75	63.441	Monopterus_albus
ENSPCIG00000023274	APEX1	99	85.312	MGP_CAROLIEiJ_G0019209	Apex1	99	83.648	Mus_caroli
ENSPCIG00000023274	APEX1	100	85.981	ENSMUSG00000035960	Apex1	100	84.013	Mus_musculus
ENSPCIG00000023274	APEX1	100	84.735	MGP_PahariEiJ_G0030232	Apex1	100	84.639	Mus_pahari
ENSPCIG00000023274	APEX1	100	85.981	MGP_SPRETEiJ_G0020101	Apex1	100	84.013	Mus_spretus
ENSPCIG00000023274	APEX1	100	84.830	ENSMLUG00000028957	APEX1	100	82.812	Myotis_lucifugus
ENSPCIG00000023274	APEX1	100	85.358	ENSNGAG00000002725	-	100	83.386	Nannospalax_galili
ENSPCIG00000023274	APEX1	99	63.889	ENSNGAG00000021748	-	100	61.801	Nannospalax_galili
ENSPCIG00000023274	APEX1	86	69.343	ENSNBRG00000005334	apex1	82	68.459	Neolamprologus_brichardi
ENSPCIG00000023274	APEX1	100	84.112	ENSNLEG00000010839	APEX1	100	83.699	Nomascus_leucogenys
ENSPCIG00000023274	APEX1	100	92.790	ENSMEUG00000014519	APEX1	100	89.969	Notamacropus_eugenii
ENSPCIG00000023274	APEX1	100	85.312	ENSOPRG00000014029	APEX1	100	83.699	Ochotona_princeps
ENSPCIG00000023274	APEX1	97	68.590	ENSODEG00000004777	-	83	75.099	Octodon_degus
ENSPCIG00000023274	APEX1	100	65.138	ENSODEG00000006583	-	100	63.692	Octodon_degus
ENSPCIG00000023274	APEX1	100	85.358	ENSODEG00000001703	-	100	83.386	Octodon_degus
ENSPCIG00000023274	APEX1	87	69.065	ENSONIG00000012089	apex1	90	69.176	Oreochromis_niloticus
ENSPCIG00000023274	APEX1	89	80.702	ENSOANG00000008836	APEX1	80	75.000	Ornithorhynchus_anatinus
ENSPCIG00000023274	APEX1	100	85.670	ENSOCUG00000005022	APEX1	100	84.326	Oryctolagus_cuniculus
ENSPCIG00000023274	APEX1	86	70.803	ENSORLG00000012378	apex1	89	69.892	Oryzias_latipes
ENSPCIG00000023274	APEX1	86	70.803	ENSORLG00020021371	apex1	89	69.892	Oryzias_latipes_hni
ENSPCIG00000023274	APEX1	86	70.803	ENSORLG00015020089	apex1	89	69.892	Oryzias_latipes_hsok
ENSPCIG00000023274	APEX1	87	68.817	ENSOMEG00000018876	apex1	89	68.817	Oryzias_melastigma
ENSPCIG00000023274	APEX1	95	78.689	ENSOGAG00000029355	-	90	79.859	Otolemur_garnettii
ENSPCIG00000023274	APEX1	100	86.604	ENSOGAG00000013335	-	100	84.639	Otolemur_garnettii
ENSPCIG00000023274	APEX1	97	82.958	ENSOARG00000001876	-	100	80.906	Ovis_aries
ENSPCIG00000023274	APEX1	100	85.358	ENSOARG00000019740	-	100	83.386	Ovis_aries
ENSPCIG00000023274	APEX1	99	74.448	ENSOARG00000014424	-	90	77.032	Ovis_aries
ENSPCIG00000023274	APEX1	100	84.112	ENSPPAG00000038760	APEX1	100	84.013	Pan_paniscus
ENSPCIG00000023274	APEX1	100	85.047	ENSPPRG00000011794	APEX1	100	83.699	Panthera_pardus
ENSPCIG00000023274	APEX1	100	85.670	ENSPTIG00000014829	APEX1	100	83.699	Panthera_tigris_altaica
ENSPCIG00000023274	APEX1	100	84.112	ENSPTRG00000006093	APEX1	100	84.013	Pan_troglodytes
ENSPCIG00000023274	APEX1	100	84.735	ENSPANG00000022757	APEX1	100	83.699	Papio_anubis
ENSPCIG00000023274	APEX1	86	69.708	ENSPKIG00000003504	apex1	89	68.817	Paramormyrops_kingsleyae
ENSPCIG00000023274	APEX1	85	61.172	ENSPMGG00000016596	apex1	80	61.172	Periophthalmus_magnuspinnatus
ENSPCIG00000023274	APEX1	100	85.981	ENSPEMG00000019097	Apex1	100	84.326	Peromyscus_maniculatus_bairdii
ENSPCIG00000023274	APEX1	92	66.553	ENSPMAG00000007275	-	95	67.972	Petromyzon_marinus
ENSPCIG00000023274	APEX1	87	69.892	ENSPFOG00000004178	apex1	90	69.892	Poecilia_formosa
ENSPCIG00000023274	APEX1	87	69.534	ENSPLAG00000012779	apex1	90	69.534	Poecilia_latipinna
ENSPCIG00000023274	APEX1	87	69.892	ENSPMEG00000019623	apex1	90	69.892	Poecilia_mexicana
ENSPCIG00000023274	APEX1	87	69.176	ENSPREG00000014298	apex1	89	69.176	Poecilia_reticulata
ENSPCIG00000023274	APEX1	100	83.489	ENSPPYG00000005565	APEX1	100	83.386	Pongo_abelii
ENSPCIG00000023274	APEX1	100	83.178	ENSPCAG00000010376	APEX1	100	81.818	Procavia_capensis
ENSPCIG00000023274	APEX1	100	85.358	ENSPCOG00000021564	APEX1	100	83.386	Propithecus_coquereli
ENSPCIG00000023274	APEX1	100	85.759	ENSPVAG00000010736	APEX1	100	83.438	Pteropus_vampyrus
ENSPCIG00000023274	APEX1	86	69.708	ENSPNYG00000023940	apex1	90	68.817	Pundamilia_nyererei
ENSPCIG00000023274	APEX1	93	62.963	ENSPNAG00000020897	apex1	85	66.667	Pygocentrus_nattereri
ENSPCIG00000023274	APEX1	100	85.358	ENSRNOG00000009663	Apex1	100	83.699	Rattus_norvegicus
ENSPCIG00000023274	APEX1	100	85.047	ENSRBIG00000038325	APEX1	99	84.013	Rhinopithecus_bieti
ENSPCIG00000023274	APEX1	100	84.112	ENSSBOG00000018921	-	100	84.013	Saimiri_boliviensis_boliviensis
ENSPCIG00000023274	APEX1	100	74.295	ENSSBOG00000031372	-	92	79.859	Saimiri_boliviensis_boliviensis
ENSPCIG00000023274	APEX1	100	94.136	ENSSHAG00000013524	APEX1	100	92.593	Sarcophilus_harrisii
ENSPCIG00000023274	APEX1	86	67.153	ENSSFOG00015001948	apex1	91	65.724	Scleropages_formosus
ENSPCIG00000023274	APEX1	86	68.613	ENSSMAG00000013348	apex1	88	67.742	Scophthalmus_maximus
ENSPCIG00000023274	APEX1	87	68.100	ENSSDUG00000016377	apex1	89	68.100	Seriola_dumerili
ENSPCIG00000023274	APEX1	87	68.459	ENSSLDG00000023005	apex1	90	68.459	Seriola_lalandi_dorsalis
ENSPCIG00000023274	APEX1	92	70.890	ENSSPUG00000000531	APEX1	95	71.277	Sphenodon_punctatus
ENSPCIG00000023274	APEX1	87	68.100	ENSSPAG00000000458	apex1	91	68.100	Stegastes_partitus
ENSPCIG00000023274	APEX1	100	85.358	ENSSSCG00000040060	-	100	83.699	Sus_scrofa
ENSPCIG00000023274	APEX1	87	53.873	ENSSSCG00000039705	-	92	53.873	Sus_scrofa
ENSPCIG00000023274	APEX1	74	61.017	ENSTGUG00000014378	APEX1	100	61.017	Taeniopygia_guttata
ENSPCIG00000023274	APEX1	86	67.153	ENSTRUG00000004268	apex1	84	66.308	Takifugu_rubripes
ENSPCIG00000023274	APEX1	97	62.460	ENSTNIG00000005778	apex1	90	67.384	Tetraodon_nigroviridis
ENSPCIG00000023274	APEX1	100	83.178	ENSTBEG00000006405	APEX1	100	80.878	Tupaia_belangeri
ENSPCIG00000023274	APEX1	74	88.983	ENSTTRG00000007860	APEX1	100	88.983	Tursiops_truncatus
ENSPCIG00000023274	APEX1	100	85.670	ENSUAMG00000010457	APEX1	100	83.699	Ursus_americanus
ENSPCIG00000023274	APEX1	100	85.670	ENSUMAG00000009178	APEX1	100	83.699	Ursus_maritimus
ENSPCIG00000023274	APEX1	74	84.322	ENSVPAG00000005083	APEX1	100	84.322	Vicugna_pacos
ENSPCIG00000023274	APEX1	100	84.639	ENSVVUG00000009010	APEX1	100	84.013	Vulpes_vulpes
ENSPCIG00000023274	APEX1	100	65.517	ENSXETG00000024773	apex1	100	65.517	Xenopus_tropicalis
ENSPCIG00000023274	APEX1	87	69.534	ENSXCOG00000015233	apex1	89	69.534	Xiphophorus_couchianus
ENSPCIG00000023274	APEX1	98	64.444	ENSXMAG00000006195	apex1	90	69.534	Xiphophorus_maculatus