EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPCIG00000023832 (Gene tree)
Gene ID: -
Gene Symbol: MSI1
Alias: -
Full Name: musashi RNA binding protein 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 31481 bases
Position: chrFUWB01003843.1:92278-123758
Accession: 7330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000032111	RRM_1	PF00076.22	4.3e-34	1	2
ENSPCIP00000032111	RRM_1	PF00076.22	4.3e-34	2	2
ENSPCIP00000032107	RRM_1	PF00076.22	5.2e-34	1	2
ENSPCIP00000032107	RRM_1	PF00076.22	5.2e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000039493	MSI1-202	2654	-	ENSPCIP00000032111	311 (aa)	-	-
ENSPCIT00000039487	MSI1-201	2787	-	ENSPCIP00000032107	330 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000023832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000023832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000023832	MSI1	54	43.787	ENSPCIG00000026989	HNRNPA0	59	43.017
ENSPCIG00000023832	MSI1	54	52.941	ENSPCIG00000013729	HNRNPA2B1	69	52.941
ENSPCIG00000023832	MSI1	55	42.442	ENSPCIG00000006715	-	69	38.961
ENSPCIG00000023832	MSI1	57	34.932	ENSPCIG00000007956	TARDBP	59	34.722
ENSPCIG00000023832	MSI1	51	41.379	ENSPCIG00000003120	TIAL1	64	32.292
ENSPCIG00000023832	MSI1	54	41.667	ENSPCIG00000009814	-	62	41.667
ENSPCIG00000023832	MSI1	54	42.690	ENSPCIG00000025443	HNRNPA3	57	43.094
ENSPCIG00000023832	MSI1	61	42.308	ENSPCIG00000011156	DAZAP1	55	42.308
ENSPCIG00000023832	MSI1	55	47.305	ENSPCIG00000003112	HNRNPD	69	43.373
ENSPCIG00000023832	MSI1	54	49.405	ENSPCIG00000003089	-	55	40.851
ENSPCIG00000023832	MSI1	54	48.214	ENSPCIG00000002735	HNRNPAB	71	42.667
ENSPCIG00000023832	MSI1	89	36.000	ENSPCIG00000013648	RBM38	54	36.000
ENSPCIG00000023832	MSI1	100	70.000	ENSPCIG00000006063	MSI2	94	71.513