EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000024119 (Gene tree)
Gene ID: 110198897
Gene Symbol: PRDM12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 17704 bases
Position: chrFUWB01001374.1:1429336-1447039
Accession: 110198897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000032500	zf-C2H2	PF00096.26	1.7e-11	1	2
ENSPCIP00000032500	zf-C2H2	PF00096.26	1.7e-11	2	2
ENSPCIP00000032500	zf-met	PF12874.7	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000039969	PRDM12-201	1068	XM_020973495	ENSPCIP00000032500	355 (aa)	XP_020829154	UPI000A28225A

Gene Model

Click here to download ENSPCIG00000024119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000024119's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000024119	PRDM12	94	95.210	ENSG00000130711	PRDM12	100	90.463	Homo_sapiens
ENSPCIG00000024119	PRDM12	99	75.844	ENSAPOG00000016051	prdm12b	100	76.302	Acanthochromis_polyacanthus
ENSPCIG00000024119	PRDM12	99	66.938	ENSAPOG00000018234	-	100	66.938	Acanthochromis_polyacanthus
ENSPCIG00000024119	PRDM12	91	92.260	ENSAMEG00000016234	PRDM12	99	92.570	Ailuropoda_melanoleuca
ENSPCIG00000024119	PRDM12	99	77.368	ENSACIG00000005193	-	100	77.632	Amphilophus_citrinellus
ENSPCIG00000024119	PRDM12	99	77.454	ENSACIG00000019578	prdm12b	100	77.719	Amphilophus_citrinellus
ENSPCIG00000024119	PRDM12	99	77.165	ENSAOCG00000015040	prdm12b	100	77.632	Amphiprion_ocellaris
ENSPCIG00000024119	PRDM12	99	77.778	ENSAPEG00000015092	prdm12b	100	78.249	Amphiprion_percula
ENSPCIG00000024119	PRDM12	100	73.177	ENSAPEG00000022849	-	100	74.740	Amphiprion_percula
ENSPCIG00000024119	PRDM12	95	81.871	ENSATEG00000014595	-	99	81.871	Anabas_testudineus
ENSPCIG00000024119	PRDM12	96	95.294	ENSANAG00000020616	PRDM12	100	95.294	Aotus_nancymaae
ENSPCIG00000024119	PRDM12	99	74.430	ENSACLG00000007631	-	100	75.949	Astatotilapia_calliptera
ENSPCIG00000024119	PRDM12	99	80.165	ENSACLG00000011876	prdm12b	100	80.165	Astatotilapia_calliptera
ENSPCIG00000024119	PRDM12	99	83.558	ENSAMXG00000033665	prdm12b	100	85.445	Astyanax_mexicanus
ENSPCIG00000024119	PRDM12	99	80.939	ENSAMXG00000008540	PRDM12	100	80.939	Astyanax_mexicanus
ENSPCIG00000024119	PRDM12	94	95.808	ENSBTAG00000023797	PRDM12	100	92.521	Bos_taurus
ENSPCIG00000024119	PRDM12	94	95.509	ENSCJAG00000020540	PRDM12	100	92.500	Callithrix_jacchus
ENSPCIG00000024119	PRDM12	82	95.533	ENSCAFG00000023076	PRDM12	99	90.966	Canis_familiaris
ENSPCIG00000024119	PRDM12	94	96.108	ENSCAFG00020024046	PRDM12	100	92.033	Canis_lupus_dingo
ENSPCIG00000024119	PRDM12	94	96.108	ENSCHIG00000025005	PRDM12	100	92.541	Capra_hircus
ENSPCIG00000024119	PRDM12	88	95.527	ENSCPOG00000005901	PRDM12	95	95.527	Cavia_porcellus
ENSPCIG00000024119	PRDM12	94	95.509	ENSCCAG00000037485	PRDM12	100	91.736	Cebus_capucinus
ENSPCIG00000024119	PRDM12	94	95.509	ENSCATG00000020327	PRDM12	100	91.736	Cercocebus_atys
ENSPCIG00000024119	PRDM12	94	94.910	ENSCLAG00000005499	PRDM12	92	94.910	Chinchilla_lanigera
ENSPCIG00000024119	PRDM12	94	95.509	ENSCSAG00000014756	PRDM12	100	91.484	Chlorocebus_sabaeus
ENSPCIG00000024119	PRDM12	100	96.056	ENSCPBG00000022628	PRDM12	100	96.056	Chrysemys_picta_bellii
ENSPCIG00000024119	PRDM12	94	95.509	ENSCGRG00001015005	Prdm12	100	90.984	Cricetulus_griseus_chok1gshd
ENSPCIG00000024119	PRDM12	99	78.495	ENSCVAG00000017166	prdm12b	100	78.706	Cyprinodon_variegatus
ENSPCIG00000024119	PRDM12	99	74.103	ENSCVAG00000000944	-	100	74.872	Cyprinodon_variegatus
ENSPCIG00000024119	PRDM12	99	85.831	ENSDARG00000007430	prdm12b	100	85.831	Danio_rerio
ENSPCIG00000024119	PRDM12	94	95.210	ENSDNOG00000042302	PRDM12	99	92.244	Dasypus_novemcinctus
ENSPCIG00000024119	PRDM12	87	64.307	ENSEBUG00000016780	prdm12b	75	65.782	Eptatretus_burgeri
ENSPCIG00000024119	PRDM12	96	95.588	ENSEASG00005008472	PRDM12	100	92.265	Equus_asinus_asinus
ENSPCIG00000024119	PRDM12	96	95.294	ENSECAG00000005933	PRDM12	100	91.989	Equus_caballus
ENSPCIG00000024119	PRDM12	99	79.167	ENSELUG00000013674	PRDM12	99	79.167	Esox_lucius
ENSPCIG00000024119	PRDM12	99	83.065	ENSELUG00000009905	prdm12b	100	83.065	Esox_lucius
ENSPCIG00000024119	PRDM12	94	96.108	ENSFCAG00000043086	PRDM12	100	92.287	Felis_catus
ENSPCIG00000024119	PRDM12	100	96.338	ENSFALG00000001445	PRDM12	89	96.338	Ficedula_albicollis
ENSPCIG00000024119	PRDM12	99	77.867	ENSFHEG00000003944	prdm12b	100	78.877	Fundulus_heteroclitus
ENSPCIG00000024119	PRDM12	99	77.062	ENSFHEG00000007746	-	100	77.062	Fundulus_heteroclitus
ENSPCIG00000024119	PRDM12	99	81.127	ENSGMOG00000011797	prdm12b	99	81.408	Gadus_morhua
ENSPCIG00000024119	PRDM12	100	96.338	ENSGALG00000003895	PRDM12	100	96.338	Gallus_gallus
ENSPCIG00000024119	PRDM12	100	77.660	ENSGAFG00000010827	prdm12b	100	79.467	Gambusia_affinis
ENSPCIG00000024119	PRDM12	100	79.570	ENSGACG00000016713	prdm12b	100	79.570	Gasterosteus_aculeatus
ENSPCIG00000024119	PRDM12	100	96.338	ENSGAGG00000014083	PRDM12	100	96.338	Gopherus_agassizii
ENSPCIG00000024119	PRDM12	94	94.910	ENSGGOG00000010568	PRDM12	100	90.437	Gorilla_gorilla
ENSPCIG00000024119	PRDM12	99	74.430	ENSHBUG00000022537	-	93	75.949	Haplochromis_burtoni
ENSPCIG00000024119	PRDM12	99	78.933	ENSHBUG00000022878	prdm12b	100	78.933	Haplochromis_burtoni
ENSPCIG00000024119	PRDM12	94	94.311	ENSHGLG00000013939	PRDM12	100	89.863	Heterocephalus_glaber_female
ENSPCIG00000024119	PRDM12	91	80.117	ENSHCOG00000003663	prdm12b	100	73.537	Hippocampus_comes
ENSPCIG00000024119	PRDM12	99	74.656	ENSHCOG00000021167	-	100	74.656	Hippocampus_comes
ENSPCIG00000024119	PRDM12	99	84.282	ENSIPUG00000017053	prdm12b	100	84.553	Ictalurus_punctatus
ENSPCIG00000024119	PRDM12	99	77.198	ENSIPUG00000019544	PRDM12	100	77.198	Ictalurus_punctatus
ENSPCIG00000024119	PRDM12	95	95.858	ENSSTOG00000005986	PRDM12	88	95.858	Ictidomys_tridecemlineatus
ENSPCIG00000024119	PRDM12	93	95.758	ENSJJAG00000005424	Prdm12	100	95.758	Jaculus_jaculus
ENSPCIG00000024119	PRDM12	99	72.593	ENSKMAG00000016921	prdm12b	100	73.086	Kryptolebias_marmoratus
ENSPCIG00000024119	PRDM12	99	79.609	ENSKMAG00000021205	-	99	79.609	Kryptolebias_marmoratus
ENSPCIG00000024119	PRDM12	99	77.428	ENSLBEG00000007776	-	100	77.690	Labrus_bergylta
ENSPCIG00000024119	PRDM12	99	78.042	ENSLBEG00000017769	prdm12b	100	78.042	Labrus_bergylta
ENSPCIG00000024119	PRDM12	99	92.373	ENSLACG00000017560	PRDM12	99	92.373	Latimeria_chalumnae
ENSPCIG00000024119	PRDM12	99	86.501	ENSLOCG00000005429	prdm12b	99	87.912	Lepisosteus_oculatus
ENSPCIG00000024119	PRDM12	94	94.412	ENSLAFG00000006979	PRDM12	93	94.236	Loxodonta_africana
ENSPCIG00000024119	PRDM12	100	89.101	ENSMFAG00000040322	PRDM12	100	90.736	Macaca_fascicularis
ENSPCIG00000024119	PRDM12	94	95.509	ENSMNEG00000037234	PRDM12	100	91.736	Macaca_nemestrina
ENSPCIG00000024119	PRDM12	99	78.457	ENSMAMG00000013212	prdm12b	100	78.400	Mastacembelus_armatus
ENSPCIG00000024119	PRDM12	99	74.807	ENSMAMG00000018988	-	100	76.093	Mastacembelus_armatus
ENSPCIG00000024119	PRDM12	99	74.055	ENSMZEG00005000415	PRDM12	100	75.567	Maylandia_zebra
ENSPCIG00000024119	PRDM12	98	95.989	ENSMGAG00000005438	PRDM12	99	95.989	Meleagris_gallopavo
ENSPCIG00000024119	PRDM12	100	91.233	ENSMAUG00000013040	Prdm12	100	91.233	Mesocricetus_auratus
ENSPCIG00000024119	PRDM12	96	95.601	ENSMICG00000015480	PRDM12	100	92.265	Microcebus_murinus
ENSPCIG00000024119	PRDM12	98	93.948	ENSMOCG00000021026	Prdm12	93	95.015	Microtus_ochrogaster
ENSPCIG00000024119	PRDM12	100	99.718	ENSMODG00000012108	PRDM12	100	99.718	Monodelphis_domestica
ENSPCIG00000024119	PRDM12	99	67.925	ENSMALG00000021901	prdm12b	99	67.925	Monopterus_albus
ENSPCIG00000024119	PRDM12	94	95.210	MGP_CAROLIEiJ_G0023414	Prdm12	100	90.959	Mus_caroli
ENSPCIG00000024119	PRDM12	94	95.210	ENSMUSG00000079466	Prdm12	100	90.959	Mus_musculus
ENSPCIG00000024119	PRDM12	94	95.210	MGP_PahariEiJ_G0024871	Prdm12	100	90.959	Mus_pahari
ENSPCIG00000024119	PRDM12	94	95.210	MGP_SPRETEiJ_G0024331	Prdm12	100	90.959	Mus_spretus
ENSPCIG00000024119	PRDM12	92	95.413	ENSNGAG00000018480	Prdm12	100	91.268	Nannospalax_galili
ENSPCIG00000024119	PRDM12	99	78.042	ENSNBRG00000006727	prdm12b	100	78.307	Neolamprologus_brichardi
ENSPCIG00000024119	PRDM12	99	75.342	ENSNBRG00000024312	-	100	76.438	Neolamprologus_brichardi
ENSPCIG00000024119	PRDM12	100	89.296	ENSMEUG00000003828	PRDM12	100	89.296	Notamacropus_eugenii
ENSPCIG00000024119	PRDM12	93	94.848	ENSOPRG00000008680	PRDM12	100	94.848	Ochotona_princeps
ENSPCIG00000024119	PRDM12	96	95.015	ENSODEG00000016282	PRDM12	64	95.015	Octodon_degus
ENSPCIG00000024119	PRDM12	61	97.706	ENSOANG00000001043	PRDM12	100	97.706	Ornithorhynchus_anatinus
ENSPCIG00000024119	PRDM12	88	90.735	ENSOCUG00000008241	PRDM12	100	90.735	Oryctolagus_cuniculus
ENSPCIG00000024119	PRDM12	99	73.657	ENSORLG00000017558	-	100	74.936	Oryzias_latipes
ENSPCIG00000024119	PRDM12	100	77.045	ENSORLG00000007114	prdm12b	100	77.045	Oryzias_latipes
ENSPCIG00000024119	PRDM12	92	81.579	ENSORLG00020019565	prdm12b	100	76.378	Oryzias_latipes_hni
ENSPCIG00000024119	PRDM12	99	73.214	ENSORLG00020013167	-	100	74.745	Oryzias_latipes_hni
ENSPCIG00000024119	PRDM12	100	76.517	ENSORLG00015007621	prdm12b	100	76.517	Oryzias_latipes_hsok
ENSPCIG00000024119	PRDM12	99	73.657	ENSORLG00015003435	-	100	74.936	Oryzias_latipes_hsok
ENSPCIG00000024119	PRDM12	99	77.513	ENSOMEG00000007762	-	100	77.513	Oryzias_melastigma
ENSPCIG00000024119	PRDM12	100	75.781	ENSOMEG00000004134	prdm12b	100	75.718	Oryzias_melastigma
ENSPCIG00000024119	PRDM12	94	96.096	ENSOGAG00000007557	PRDM12	100	96.096	Otolemur_garnettii
ENSPCIG00000024119	PRDM12	83	93.174	ENSPPAG00000031506	-	99	93.174	Pan_paniscus
ENSPCIG00000024119	PRDM12	100	84.958	ENSPPRG00000023024	PRDM12	92	84.958	Panthera_pardus
ENSPCIG00000024119	PRDM12	94	95.210	ENSPTRG00000043324	-	100	90.710	Pan_troglodytes
ENSPCIG00000024119	PRDM12	94	95.210	ENSPTRG00000021475	PRDM12	100	90.710	Pan_troglodytes
ENSPCIG00000024119	PRDM12	94	95.509	ENSPANG00000025967	PRDM12	100	91.736	Papio_anubis
ENSPCIG00000024119	PRDM12	99	84.182	ENSPKIG00000007228	prdm12b	100	84.450	Paramormyrops_kingsleyae
ENSPCIG00000024119	PRDM12	97	77.401	ENSPKIG00000004305	PRDM12	99	77.778	Paramormyrops_kingsleyae
ENSPCIG00000024119	PRDM12	100	94.648	ENSPSIG00000006739	PRDM12	100	94.648	Pelodiscus_sinensis
ENSPCIG00000024119	PRDM12	100	76.781	ENSPMGG00000008867	prdm12b	100	78.820	Periophthalmus_magnuspinnatus
ENSPCIG00000024119	PRDM12	99	73.890	ENSPMGG00000002356	-	100	74.740	Periophthalmus_magnuspinnatus
ENSPCIG00000024119	PRDM12	94	95.482	ENSPEMG00000009969	Prdm12	96	91.453	Peromyscus_maniculatus_bairdii
ENSPCIG00000024119	PRDM12	99	79.245	ENSPFOG00000019841	prdm12b	100	79.245	Poecilia_formosa
ENSPCIG00000024119	PRDM12	92	84.940	ENSPLAG00000016626	prdm12b	100	78.571	Poecilia_latipinna
ENSPCIG00000024119	PRDM12	97	76.694	ENSPMEG00000016698	prdm12b	100	77.989	Poecilia_mexicana
ENSPCIG00000024119	PRDM12	94	77.391	ENSPREG00000003211	-	94	77.391	Poecilia_reticulata
ENSPCIG00000024119	PRDM12	92	84.776	ENSPREG00000015073	prdm12b	100	78.272	Poecilia_reticulata
ENSPCIG00000024119	PRDM12	97	93.895	ENSPPYG00000019694	PRDM12	98	93.895	Pongo_abelii
ENSPCIG00000024119	PRDM12	94	96.108	ENSPCOG00000022255	PRDM12	100	91.803	Propithecus_coquereli
ENSPCIG00000024119	PRDM12	94	95.808	ENSPVAG00000001511	PRDM12	100	91.530	Pteropus_vampyrus
ENSPCIG00000024119	PRDM12	99	78.249	ENSPNYG00000009607	prdm12b	100	78.249	Pundamilia_nyererei
ENSPCIG00000024119	PRDM12	99	74.055	ENSPNYG00000013589	-	100	75.567	Pundamilia_nyererei
ENSPCIG00000024119	PRDM12	99	75.266	ENSPNAG00000013396	PRDM12	100	77.089	Pygocentrus_nattereri
ENSPCIG00000024119	PRDM12	99	84.553	ENSPNAG00000024532	prdm12b	100	86.179	Pygocentrus_nattereri
ENSPCIG00000024119	PRDM12	94	95.210	ENSRNOG00000009218	Prdm12	100	90.959	Rattus_norvegicus
ENSPCIG00000024119	PRDM12	89	95.899	ENSRBIG00000042712	PRDM12	98	88.268	Rhinopithecus_bieti
ENSPCIG00000024119	PRDM12	90	95.950	ENSRROG00000043554	PRDM12	100	95.950	Rhinopithecus_roxellana
ENSPCIG00000024119	PRDM12	100	99.157	ENSSHAG00000015972	PRDM12	100	99.157	Sarcophilus_harrisii
ENSPCIG00000024119	PRDM12	99	75.448	ENSSMAG00000003754	prdm12b	100	75.448	Scophthalmus_maximus
ENSPCIG00000024119	PRDM12	99	77.865	ENSSDUG00000023498	prdm12b	100	77.865	Seriola_dumerili
ENSPCIG00000024119	PRDM12	95	81.924	ENSSDUG00000019071	-	100	77.604	Seriola_dumerili
ENSPCIG00000024119	PRDM12	99	82.633	ENSSLDG00000013562	-	100	82.633	Seriola_lalandi_dorsalis
ENSPCIG00000024119	PRDM12	99	77.953	ENSSLDG00000009557	prdm12b	100	77.953	Seriola_lalandi_dorsalis
ENSPCIG00000024119	PRDM12	100	95.775	ENSSPUG00000013424	PRDM12	100	95.775	Sphenodon_punctatus
ENSPCIG00000024119	PRDM12	99	67.700	ENSSPAG00000022420	-	100	70.777	Stegastes_partitus
ENSPCIG00000024119	PRDM12	99	77.225	ENSSPAG00000018824	prdm12b	100	77.953	Stegastes_partitus
ENSPCIG00000024119	PRDM12	94	96.108	ENSSSCG00000005703	PRDM12	100	92.033	Sus_scrofa
ENSPCIG00000024119	PRDM12	99	78.729	ENSTRUG00000013239	-	100	78.729	Takifugu_rubripes
ENSPCIG00000024119	PRDM12	99	79.730	ENSTRUG00000018659	prdm12b	100	79.730	Takifugu_rubripes
ENSPCIG00000024119	PRDM12	99	79.301	ENSTNIG00000009020	prdm12b	99	79.245	Tetraodon_nigroviridis
ENSPCIG00000024119	PRDM12	99	77.159	ENSTNIG00000005859	-	99	77.159	Tetraodon_nigroviridis
ENSPCIG00000024119	PRDM12	94	96.108	ENSUAMG00000009653	PRDM12	94	95.308	Ursus_americanus
ENSPCIG00000024119	PRDM12	94	96.084	ENSVVUG00000027662	PRDM12	79	96.084	Vulpes_vulpes
ENSPCIG00000024119	PRDM12	100	78.075	ENSXCOG00000002836	prdm12b	100	79.357	Xiphophorus_couchianus
ENSPCIG00000024119	PRDM12	99	75.065	ENSXMAG00000028012	-	100	75.844	Xiphophorus_maculatus
ENSPCIG00000024119	PRDM12	99	77.660	ENSXMAG00000005537	prdm12b	100	78.933	Xiphophorus_maculatus