EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000024841 (Gene tree)
Gene ID: 110217878
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 8573 bases
Position: chrFUWB01001583.1:869697-878269
Accession: 25512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000033479	PRP38	PF03371.15	2.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000041212	PRPF38B-201	1635	-	ENSPCIP00000033479	544 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000024841's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000024841's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000024841	PRPF38B	61	94.848	ENSG00000134186	PRPF38B	100	94.845	Homo_sapiens
ENSPCIG00000024841	PRPF38B	100	89.455	ENSANAG00000028333	PRPF38B	100	94.845	Aotus_nancymaae
ENSPCIG00000024841	PRPF38B	60	94.225	ENSCGRG00001018841	Prpf38b	60	94.242	Cricetulus_griseus_chok1gshd
ENSPCIG00000024841	PRPF38B	100	89.781	ENSEEUG00000014328	PRPF38B	60	92.447	Erinaceus_europaeus
ENSPCIG00000024841	PRPF38B	100	88.727	ENSFDAG00000021009	PRPF38B	59	91.212	Fukomys_damarensis
ENSPCIG00000024841	PRPF38B	61	94.848	ENSGGOG00000011288	PRPF38B	100	94.845	Gorilla_gorilla
ENSPCIG00000024841	PRPF38B	90	87.751	ENSMGAG00000006188	PRPF38B	56	96.043	Meleagris_gallopavo
ENSPCIG00000024841	PRPF38B	60	94.833	ENSMAUG00000019131	Prpf38b	60	93.656	Mesocricetus_auratus
ENSPCIG00000024841	PRPF38B	100	86.182	MGP_CAROLIEiJ_G0025542	Prpf38b	99	78.125	Mus_caroli
ENSPCIG00000024841	PRPF38B	61	96.667	ENSMUSG00000027881	Prpf38b	99	77.083	Mus_musculus
ENSPCIG00000024841	PRPF38B	100	87.455	MGP_PahariEiJ_G0026988	Prpf38b	99	77.083	Mus_pahari
ENSPCIG00000024841	PRPF38B	100	87.636	MGP_SPRETEiJ_G0026492	Prpf38b	99	77.083	Mus_spretus
ENSPCIG00000024841	PRPF38B	61	95.758	ENSNLEG00000001645	-	100	93.814	Nomascus_leucogenys
ENSPCIG00000024841	PRPF38B	100	82.545	ENSNLEG00000030268	-	61	88.788	Nomascus_leucogenys
ENSPCIG00000024841	PRPF38B	61	94.848	ENSPPAG00000001260	PRPF38B	100	94.845	Pan_paniscus
ENSPCIG00000024841	PRPF38B	61	95.455	ENSPPRG00000002116	PRPF38B	98	96.859	Panthera_pardus
ENSPCIG00000024841	PRPF38B	61	94.848	ENSPTRG00000001032	PRPF38B	100	94.845	Pan_troglodytes
ENSPCIG00000024841	PRPF38B	100	91.091	ENSPANG00000007560	PRPF38B	100	93.814	Papio_anubis
ENSPCIG00000024841	PRPF38B	60	94.833	ENSPVAG00000011929	-	60	95.152	Pteropus_vampyrus
ENSPCIG00000024841	PRPF38B	100	89.091	ENSSARG00000012818	-	60	93.636	Sorex_araneus
ENSPCIG00000024841	PRPF38B	85	80.342	ENSTGUG00000004594	-	71	89.728	Taeniopygia_guttata
ENSPCIG00000024841	PRPF38B	61	96.677	ENSUAMG00000023817	PRPF38B	60	94.578	Ursus_americanus