EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000026516 (Gene tree)
Gene ID: 110209831
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 70016 bases
Position: chrFUWB01005603.1:13576-83591
Accession: 24704
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000035918	La	PF05383.17	1.2e-22	1	1
ENSPCIP00000035919	La	PF05383.17	1.3e-22	1	1
ENSPCIP00000035925	La	PF05383.17	2e-22	1	1
ENSPCIP00000035920	La	PF05383.17	2.1e-22	1	1
ENSPCIP00000035931	La	PF05383.17	2.2e-22	1	1
ENSPCIP00000035929	La	PF05383.17	2.2e-22	1	1
ENSPCIP00000035922	La	PF05383.17	2.3e-22	1	1
ENSPCIP00000035917	La	PF05383.17	2.4e-22	1	1
ENSPCIP00000035916	La	PF05383.17	2.4e-22	1	1
ENSPCIP00000035933	La	PF05383.17	1.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000044220	LARP1B-209	2316	-	ENSPCIP00000035931	771 (aa)	-	-
ENSPCIT00000044222	LARP1B-210	2232	-	ENSPCIP00000035933	743 (aa)	-	-
ENSPCIT00000044205	LARP1B-201	2886	-	ENSPCIP00000035916	961 (aa)	-	-
ENSPCIT00000044206	LARP1B-202	2883	-	ENSPCIP00000035917	960 (aa)	-	-
ENSPCIT00000044207	LARP1B-203	1143	-	ENSPCIP00000035918	380 (aa)	-	-
ENSPCIT00000044218	LARP1B-208	2349	-	ENSPCIP00000035929	782 (aa)	-	-
ENSPCIT00000044211	LARP1B-206	2508	-	ENSPCIP00000035922	835 (aa)	-	-
ENSPCIT00000044208	LARP1B-204	1158	-	ENSPCIP00000035919	385 (aa)	-	-
ENSPCIT00000044209	LARP1B-205	1017	-	ENSPCIP00000035920	338 (aa)	-	-
ENSPCIT00000044214	LARP1B-207	3637	-	ENSPCIP00000035925	755 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000026516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000026516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000026516	LARP1B	98	67.655	ENSPCIG00000019242	LARP1	74	62.892

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000026516	LARP1B	98	84.780	ENSG00000138709	LARP1B	99	84.222	Homo_sapiens
ENSPCIG00000026516	LARP1B	99	61.691	ENSAPOG00000020101	larp1b	87	56.718	Acanthochromis_polyacanthus
ENSPCIG00000026516	LARP1B	87	86.667	ENSAMEG00000002748	LARP1B	100	86.799	Ailuropoda_melanoleuca
ENSPCIG00000026516	LARP1B	93	63.122	ENSACIG00000023890	larp1b	78	65.571	Amphilophus_citrinellus
ENSPCIG00000026516	LARP1B	83	63.522	ENSAOCG00000014268	larp1b	85	58.374	Amphiprion_ocellaris
ENSPCIG00000026516	LARP1B	99	61.924	ENSAPEG00000004126	larp1b	79	65.444	Amphiprion_percula
ENSPCIG00000026516	LARP1B	93	64.986	ENSATEG00000017849	larp1b	87	57.878	Anabas_testudineus
ENSPCIG00000026516	LARP1B	93	80.197	ENSAPLG00000010129	LARP1B	97	72.345	Anas_platyrhynchos
ENSPCIG00000026516	LARP1B	89	85.587	ENSACAG00000011338	LARP1B	87	80.604	Anolis_carolinensis
ENSPCIG00000026516	LARP1B	85	79.417	ENSANAG00000034618	LARP1B	96	75.758	Aotus_nancymaae
ENSPCIG00000026516	LARP1B	93	62.745	ENSACLG00000011948	larp1b	86	55.828	Astatotilapia_calliptera
ENSPCIG00000026516	LARP1B	97	57.143	ENSAMXG00000006805	larp1b	83	52.746	Astyanax_mexicanus
ENSPCIG00000026516	LARP1B	100	86.225	ENSBTAG00000012135	LARP1B	98	83.689	Bos_taurus
ENSPCIG00000026516	LARP1B	98	84.595	ENSCJAG00000003338	LARP1B	99	85.094	Callithrix_jacchus
ENSPCIG00000026516	LARP1B	100	88.079	ENSCAFG00000003831	LARP1B	100	85.225	Canis_familiaris
ENSPCIG00000026516	LARP1B	100	86.701	ENSCAFG00020018899	LARP1B	100	85.225	Canis_lupus_dingo
ENSPCIG00000026516	LARP1B	100	85.340	ENSCHIG00000023144	LARP1B	100	83.974	Capra_hircus
ENSPCIG00000026516	LARP1B	88	79.403	ENSTSYG00000002037	-	99	79.514	Carlito_syrichta
ENSPCIG00000026516	LARP1B	65	91.509	ENSCPOG00000034668	-	97	63.303	Cavia_porcellus
ENSPCIG00000026516	LARP1B	98	83.979	ENSCCAG00000021948	LARP1B	99	84.478	Cebus_capucinus
ENSPCIG00000026516	LARP1B	98	83.824	ENSCATG00000013541	LARP1B	99	83.551	Cercocebus_atys
ENSPCIG00000026516	LARP1B	86	81.346	ENSCLAG00000006448	-	99	80.723	Chinchilla_lanigera
ENSPCIG00000026516	LARP1B	98	85.047	ENSCSAG00000003582	LARP1B	99	84.365	Chlorocebus_sabaeus
ENSPCIG00000026516	LARP1B	98	83.089	ENSCHOG00000005354	LARP1B	100	77.065	Choloepus_hoffmanni
ENSPCIG00000026516	LARP1B	99	84.615	ENSCPBG00000017480	LARP1B	88	81.615	Chrysemys_picta_bellii
ENSPCIG00000026516	LARP1B	98	85.027	ENSCANG00000026958	LARP1B	99	84.028	Colobus_angolensis_palliatus
ENSPCIG00000026516	LARP1B	87	86.364	ENSCGRG00001004660	-	99	85.672	Cricetulus_griseus_chok1gshd
ENSPCIG00000026516	LARP1B	87	86.364	ENSCGRG00000001914	-	99	85.672	Cricetulus_griseus_crigri
ENSPCIG00000026516	LARP1B	90	63.793	ENSCSEG00000013519	larp1b	73	68.352	Cynoglossus_semilaevis
ENSPCIG00000026516	LARP1B	94	63.611	ENSCVAG00000005046	larp1b	86	57.172	Cyprinodon_variegatus
ENSPCIG00000026516	LARP1B	95	60.268	ENSDARG00000061169	larp1b	67	69.717	Danio_rerio
ENSPCIG00000026516	LARP1B	90	83.673	ENSDNOG00000018765	-	99	86.133	Dasypus_novemcinctus
ENSPCIG00000026516	LARP1B	86	90.909	ENSETEG00000012497	LARP1B	80	90.909	Echinops_telfairi
ENSPCIG00000026516	LARP1B	88	58.114	ENSEBUG00000003668	larp1b	88	52.068	Eptatretus_burgeri
ENSPCIG00000026516	LARP1B	100	84.808	ENSEASG00005018106	LARP1B	99	85.417	Equus_asinus_asinus
ENSPCIG00000026516	LARP1B	100	85.298	ENSECAG00000001088	LARP1B	83	82.484	Equus_caballus
ENSPCIG00000026516	LARP1B	80	56.625	ENSELUG00000023774	larp1b	77	52.083	Esox_lucius
ENSPCIG00000026516	LARP1B	87	85.455	ENSFCAG00000014650	-	99	84.776	Felis_catus
ENSPCIG00000026516	LARP1B	100	73.212	ENSFALG00000008098	LARP1B	100	71.612	Ficedula_albicollis
ENSPCIG00000026516	LARP1B	99	61.811	ENSFHEG00000010264	larp1b	83	56.851	Fundulus_heteroclitus
ENSPCIG00000026516	LARP1B	94	56.056	ENSGMOG00000005207	larp1b	71	73.256	Gadus_morhua
ENSPCIG00000026516	LARP1B	100	72.131	ENSGALG00000010207	LARP1B	84	74.715	Gallus_gallus
ENSPCIG00000026516	LARP1B	94	64.903	ENSGAFG00000012012	larp1b	97	58.659	Gambusia_affinis
ENSPCIG00000026516	LARP1B	95	60.137	ENSGACG00000004609	larp1b	73	66.034	Gasterosteus_aculeatus
ENSPCIG00000026516	LARP1B	100	84.280	ENSGAGG00000017209	LARP1B	88	81.144	Gopherus_agassizii
ENSPCIG00000026516	LARP1B	98	85.047	ENSGGOG00000015900	LARP1B	99	84.331	Gorilla_gorilla
ENSPCIG00000026516	LARP1B	93	62.640	ENSHBUG00000009730	larp1b	86	55.840	Haplochromis_burtoni
ENSPCIG00000026516	LARP1B	86	80.967	ENSHGLG00000006728	-	98	80.952	Heterocephalus_glaber_female
ENSPCIG00000026516	LARP1B	87	70.606	ENSHGLG00000013922	-	99	69.322	Heterocephalus_glaber_female
ENSPCIG00000026516	LARP1B	87	70.606	ENSHGLG00100016491	-	99	69.322	Heterocephalus_glaber_male
ENSPCIG00000026516	LARP1B	91	79.710	ENSHGLG00100014041	-	98	80.120	Heterocephalus_glaber_male
ENSPCIG00000026516	LARP1B	91	62.049	ENSHCOG00000000918	larp1b	80	76.562	Hippocampus_comes
ENSPCIG00000026516	LARP1B	99	59.073	ENSIPUG00000012138	larp1b	83	54.256	Ictalurus_punctatus
ENSPCIG00000026516	LARP1B	66	79.911	ENSSTOG00000033183	-	94	79.911	Ictidomys_tridecemlineatus
ENSPCIG00000026516	LARP1B	87	68.976	ENSSTOG00000034510	-	96	64.706	Ictidomys_tridecemlineatus
ENSPCIG00000026516	LARP1B	87	82.477	ENSSTOG00000008596	-	99	82.143	Ictidomys_tridecemlineatus
ENSPCIG00000026516	LARP1B	90	73.333	ENSSTOG00000021917	-	98	74.493	Ictidomys_tridecemlineatus
ENSPCIG00000026516	LARP1B	87	82.371	ENSJJAG00000022360	Larp1b	99	81.882	Jaculus_jaculus
ENSPCIG00000026516	LARP1B	92	63.158	ENSKMAG00000011589	larp1b	83	56.517	Kryptolebias_marmoratus
ENSPCIG00000026516	LARP1B	94	64.256	ENSLBEG00000005655	larp1b	85	58.038	Labrus_bergylta
ENSPCIG00000026516	LARP1B	97	78.825	ENSLACG00000015247	LARP1B	99	73.402	Latimeria_chalumnae
ENSPCIG00000026516	LARP1B	99	73.788	ENSLOCG00000010684	larp1b	96	67.762	Lepisosteus_oculatus
ENSPCIG00000026516	LARP1B	87	87.613	ENSLAFG00000008473	-	99	87.613	Loxodonta_africana
ENSPCIG00000026516	LARP1B	98	85.428	ENSMFAG00000002218	LARP1B	99	84.967	Macaca_fascicularis
ENSPCIG00000026516	LARP1B	85	58.333	ENSMFAG00000003306	-	90	84.058	Macaca_fascicularis
ENSPCIG00000026516	LARP1B	98	85.294	ENSMMUG00000021347	LARP1B	99	84.967	Macaca_mulatta
ENSPCIG00000026516	LARP1B	64	82.394	ENSMNEG00000027747	-	87	84.559	Macaca_nemestrina
ENSPCIG00000026516	LARP1B	98	80.458	ENSMNEG00000030406	LARP1B	99	81.074	Macaca_nemestrina
ENSPCIG00000026516	LARP1B	98	84.833	ENSMLEG00000009306	LARP1B	99	81.373	Mandrillus_leucophaeus
ENSPCIG00000026516	LARP1B	99	61.741	ENSMAMG00000000081	larp1b	88	57.305	Mastacembelus_armatus
ENSPCIG00000026516	LARP1B	91	64.029	ENSMZEG00005002545	larp1b	98	60.283	Maylandia_zebra
ENSPCIG00000026516	LARP1B	87	72.917	ENSMGAG00000004809	LARP1B	98	64.891	Meleagris_gallopavo
ENSPCIG00000026516	LARP1B	87	85.455	ENSMAUG00000007879	-	99	84.776	Mesocricetus_auratus
ENSPCIG00000026516	LARP1B	98	89.824	ENSMICG00000036111	LARP1B	98	88.258	Microcebus_murinus
ENSPCIG00000026516	LARP1B	92	70.857	ENSMICG00000037883	-	99	68.750	Microcebus_murinus
ENSPCIG00000026516	LARP1B	86	64.220	ENSMICG00000028052	-	99	66.339	Microcebus_murinus
ENSPCIG00000026516	LARP1B	70	89.811	ENSMOCG00000001490	Larp1b	94	89.734	Microtus_ochrogaster
ENSPCIG00000026516	LARP1B	100	95.319	ENSMODG00000012300	LARP1B	84	95.122	Monodelphis_domestica
ENSPCIG00000026516	LARP1B	96	63.537	ENSMALG00000003638	larp1b	77	67.617	Monopterus_albus
ENSPCIG00000026516	LARP1B	87	83.636	MGP_CAROLIEiJ_G0024962	Larp1b	99	82.985	Mus_caroli
ENSPCIG00000026516	LARP1B	89	84.866	ENSMUSG00000025762	Larp1b	99	84.179	Mus_musculus
ENSPCIG00000026516	LARP1B	87	85.152	MGP_PahariEiJ_G0026403	Larp1b	99	84.478	Mus_pahari
ENSPCIG00000026516	LARP1B	87	84.848	MGP_SPRETEiJ_G0025897	Larp1b	99	84.179	Mus_spretus
ENSPCIG00000026516	LARP1B	100	87.417	ENSMPUG00000017365	LARP1B	83	85.122	Mustela_putorius_furo
ENSPCIG00000026516	LARP1B	94	85.434	ENSMLUG00000010229	LARP1B	97	79.162	Myotis_lucifugus
ENSPCIG00000026516	LARP1B	93	57.932	ENSNBRG00000023846	larp1b	87	52.948	Neolamprologus_brichardi
ENSPCIG00000026516	LARP1B	98	84.533	ENSNLEG00000013819	LARP1B	99	83.913	Nomascus_leucogenys
ENSPCIG00000026516	LARP1B	86	100.000	ENSMEUG00000010308	LARP1B	82	100.000	Notamacropus_eugenii
ENSPCIG00000026516	LARP1B	97	72.481	ENSOPRG00000005478	LARP1B	99	69.071	Ochotona_princeps
ENSPCIG00000026516	LARP1B	86	81.346	ENSODEG00000001292	-	99	80.723	Octodon_degus
ENSPCIG00000026516	LARP1B	91	63.791	ENSONIG00000012386	larp1b	93	57.530	Oreochromis_niloticus
ENSPCIG00000026516	LARP1B	100	85.298	ENSOCUG00000013330	LARP1B	100	82.976	Oryctolagus_cuniculus
ENSPCIG00000026516	LARP1B	93	63.254	ENSORLG00000017954	larp1b	87	55.624	Oryzias_latipes
ENSPCIG00000026516	LARP1B	97	61.373	ENSORLG00020013081	larp1b	87	55.521	Oryzias_latipes_hni
ENSPCIG00000026516	LARP1B	97	62.180	ENSORLG00015009580	larp1b	85	57.068	Oryzias_latipes_hsok
ENSPCIG00000026516	LARP1B	96	62.280	ENSOMEG00000004210	larp1b	86	56.776	Oryzias_melastigma
ENSPCIG00000026516	LARP1B	92	88.825	ENSOGAG00000005771	LARP1B	98	85.324	Otolemur_garnettii
ENSPCIG00000026516	LARP1B	98	85.047	ENSOARG00000015300	LARP1B	99	83.913	Ovis_aries
ENSPCIG00000026516	LARP1B	98	84.646	ENSPPAG00000030439	LARP1B	99	84.113	Pan_paniscus
ENSPCIG00000026516	LARP1B	87	85.455	ENSPPRG00000002743	-	99	84.776	Panthera_pardus
ENSPCIG00000026516	LARP1B	87	85.455	ENSPTIG00000011225	LARP1B	99	84.776	Panthera_tigris_altaica
ENSPCIG00000026516	LARP1B	98	84.780	ENSPTRG00000016437	LARP1B	99	84.331	Pan_troglodytes
ENSPCIG00000026516	LARP1B	98	85.294	ENSPANG00000012488	LARP1B	99	84.858	Papio_anubis
ENSPCIG00000026516	LARP1B	93	57.895	ENSPKIG00000014360	larp1b	89	52.296	Paramormyrops_kingsleyae
ENSPCIG00000026516	LARP1B	93	86.629	ENSPSIG00000012885	LARP1B	93	82.993	Pelodiscus_sinensis
ENSPCIG00000026516	LARP1B	94	63.202	ENSPMGG00000007207	larp1b	86	62.036	Periophthalmus_magnuspinnatus
ENSPCIG00000026516	LARP1B	88	58.721	ENSPMAG00000002700	larp1b	98	52.929	Petromyzon_marinus
ENSPCIG00000026516	LARP1B	87	53.203	ENSPFOG00000022837	-	66	76.000	Poecilia_formosa
ENSPCIG00000026516	LARP1B	99	61.041	ENSPFOG00000019519	larp1b	87	56.362	Poecilia_formosa
ENSPCIG00000026516	LARP1B	99	62.533	ENSPLAG00000007115	larp1b	87	57.449	Poecilia_latipinna
ENSPCIG00000026516	LARP1B	99	62.549	ENSPMEG00000001224	larp1b	87	57.201	Poecilia_mexicana
ENSPCIG00000026516	LARP1B	74	56.574	ENSPREG00000005955	-	93	54.576	Poecilia_reticulata
ENSPCIG00000026516	LARP1B	98	82.667	ENSPCAG00000007546	LARP1B	99	81.542	Procavia_capensis
ENSPCIG00000026516	LARP1B	92	85.057	ENSPCOG00000021874	LARP1B	99	87.413	Propithecus_coquereli
ENSPCIG00000026516	LARP1B	97	82.787	ENSPVAG00000005373	LARP1B	99	78.375	Pteropus_vampyrus
ENSPCIG00000026516	LARP1B	91	64.140	ENSPNYG00000017357	larp1b	98	60.128	Pundamilia_nyererei
ENSPCIG00000026516	LARP1B	92	63.165	ENSPNAG00000008823	larp1b	77	65.769	Pygocentrus_nattereri
ENSPCIG00000026516	LARP1B	87	86.970	ENSRNOG00000038366	Larp1b	99	86.269	Rattus_norvegicus
ENSPCIG00000026516	LARP1B	87	82.727	ENSRBIG00000039982	-	99	82.685	Rhinopithecus_bieti
ENSPCIG00000026516	LARP1B	87	75.455	ENSRBIG00000038568	-	95	73.199	Rhinopithecus_bieti
ENSPCIG00000026516	LARP1B	98	85.561	ENSRROG00000030771	LARP1B	99	84.967	Rhinopithecus_roxellana
ENSPCIG00000026516	LARP1B	88	72.757	ENSRROG00000038525	-	95	75.433	Rhinopithecus_roxellana
ENSPCIG00000026516	LARP1B	90	93.878	ENSSHAG00000014474	LARP1B	99	95.352	Sarcophilus_harrisii
ENSPCIG00000026516	LARP1B	93	62.517	ENSSMAG00000006347	larp1b	95	55.487	Scophthalmus_maximus
ENSPCIG00000026516	LARP1B	93	64.789	ENSSDUG00000004182	larp1b	86	57.364	Seriola_dumerili
ENSPCIG00000026516	LARP1B	92	63.743	ENSSLDG00000014613	larp1b	81	65.385	Seriola_lalandi_dorsalis
ENSPCIG00000026516	LARP1B	100	72.997	ENSSPUG00000011837	LARP1B	94	73.908	Sphenodon_punctatus
ENSPCIG00000026516	LARP1B	94	64.763	ENSSPAG00000017772	larp1b	78	65.896	Stegastes_partitus
ENSPCIG00000026516	LARP1B	100	84.901	ENSSSCG00000034280	LARP1B	99	91.753	Sus_scrofa
ENSPCIG00000026516	LARP1B	85	52.265	ENSSSCG00000040491	-	99	64.706	Sus_scrofa
ENSPCIG00000026516	LARP1B	95	75.414	ENSTGUG00000002098	-	91	72.468	Taeniopygia_guttata
ENSPCIG00000026516	LARP1B	95	62.140	ENSTRUG00000005612	larp1b	84	55.757	Takifugu_rubripes
ENSPCIG00000026516	LARP1B	93	63.662	ENSTNIG00000012398	larp1b	93	55.699	Tetraodon_nigroviridis
ENSPCIG00000026516	LARP1B	86	93.182	ENSTBEG00000004177	LARP1B	82	93.182	Tupaia_belangeri
ENSPCIG00000026516	LARP1B	98	81.952	ENSTTRG00000012984	LARP1B	99	77.233	Tursiops_truncatus
ENSPCIG00000026516	LARP1B	92	74.138	ENSUAMG00000016938	-	90	89.349	Ursus_americanus
ENSPCIG00000026516	LARP1B	100	87.550	ENSUMAG00000007373	LARP1B	100	85.225	Ursus_maritimus
ENSPCIG00000026516	LARP1B	90	87.701	ENSVPAG00000007223	LARP1B	100	73.443	Vicugna_pacos
ENSPCIG00000026516	LARP1B	100	87.815	ENSVVUG00000011307	LARP1B	99	86.301	Vulpes_vulpes
ENSPCIG00000026516	LARP1B	95	67.961	ENSXETG00000022512	larp1b	86	62.346	Xenopus_tropicalis
ENSPCIG00000026516	LARP1B	88	61.689	ENSXCOG00000004435	larp1b	73	60.168	Xiphophorus_couchianus
ENSPCIG00000026516	LARP1B	94	64.763	ENSXMAG00000008150	larp1b	72	69.737	Xiphophorus_maculatus