EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000026887 (Gene tree)
Gene ID: 110198593
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 128318 bases
Position: chrFUWB01002541.1:30224-158541
Accession: 18222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000036448	Fox-1_C	PF12414.8	4.1e-30	1	1
ENSPCIP00000036449	Fox-1_C	PF12414.8	2.6e-28	1	1
ENSPCIP00000036448	RRM_1	PF00076.22	4.2e-18	1	1
ENSPCIP00000036449	RRM_1	PF00076.22	4.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000044855	RBFOX1-202	933	-	ENSPCIP00000036449	310 (aa)	-	-
ENSPCIT00000044854	RBFOX1-201	855	-	ENSPCIP00000036448	284 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000026887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000026887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000026887	RBFOX1	98	55.689	ENSPCIG00000005766	RBFOX3	68	61.753
ENSPCIG00000026887	RBFOX1	100	64.803	ENSPCIG00000021550	RBFOX2	77	64.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000026887	RBFOX1	100	92.759	ENSG00000078328	RBFOX1	73	92.759	Homo_sapiens
ENSPCIG00000026887	RBFOX1	100	79.655	ENSAPOG00000003197	rbfox1	68	79.655	Acanthochromis_polyacanthus
ENSPCIG00000026887	RBFOX1	86	62.230	ENSACIG00000005478	rbfox1	63	61.871	Amphilophus_citrinellus
ENSPCIG00000026887	RBFOX1	62	79.096	ENSAOCG00000008283	rbfox1	51	79.096	Amphiprion_ocellaris
ENSPCIG00000026887	RBFOX1	100	77.465	ENSAPEG00000010636	rbfox1	76	75.000	Amphiprion_percula
ENSPCIG00000026887	RBFOX1	62	78.531	ENSATEG00000007513	rbfox1	51	77.966	Anabas_testudineus
ENSPCIG00000026887	RBFOX1	100	93.448	ENSAPLG00000013263	RBFOX1	73	93.448	Anas_platyrhynchos
ENSPCIG00000026887	RBFOX1	100	83.959	ENSACAG00000004013	RBFOX1	73	83.959	Anolis_carolinensis
ENSPCIG00000026887	RBFOX1	100	93.662	ENSANAG00000029527	RBFOX1	72	93.662	Aotus_nancymaae
ENSPCIG00000026887	RBFOX1	100	91.781	ENSBTAG00000007210	RBFOX1	73	91.781	Bos_taurus
ENSPCIG00000026887	RBFOX1	100	94.014	ENSCJAG00000017351	RBFOX1	71	94.014	Callithrix_jacchus
ENSPCIG00000026887	RBFOX1	100	91.468	ENSCAFG00000019082	RBFOX1	70	91.468	Canis_familiaris
ENSPCIG00000026887	RBFOX1	85	80.534	ENSCAFG00020024881	RBFOX1	64	81.226	Canis_lupus_dingo
ENSPCIG00000026887	RBFOX1	100	92.123	ENSCHIG00000023549	RBFOX1	73	92.123	Capra_hircus
ENSPCIG00000026887	RBFOX1	100	94.014	ENSTSYG00000005334	RBFOX1	75	91.781	Carlito_syrichta
ENSPCIG00000026887	RBFOX1	100	92.069	ENSCAPG00000017669	RBFOX1	75	92.069	Cavia_aperea
ENSPCIG00000026887	RBFOX1	100	92.069	ENSCPOG00000011314	RBFOX1	74	92.069	Cavia_porcellus
ENSPCIG00000026887	RBFOX1	100	91.126	ENSCCAG00000023031	RBFOX1	74	90.823	Cebus_capucinus
ENSPCIG00000026887	RBFOX1	100	91.468	ENSCATG00000033816	RBFOX1	70	93.893	Cercocebus_atys
ENSPCIG00000026887	RBFOX1	100	92.414	ENSCLAG00000012761	RBFOX1	73	92.414	Chinchilla_lanigera
ENSPCIG00000026887	RBFOX1	84	92.884	ENSCSAG00000008739	RBFOX1	71	92.884	Chlorocebus_sabaeus
ENSPCIG00000026887	RBFOX1	74	96.923	ENSCHOG00000012843	RBFOX1	50	96.923	Choloepus_hoffmanni
ENSPCIG00000026887	RBFOX1	100	93.448	ENSCPBG00000026626	RBFOX1	73	92.466	Chrysemys_picta_bellii
ENSPCIG00000026887	RBFOX1	100	91.468	ENSCANG00000033125	RBFOX1	70	91.468	Colobus_angolensis_palliatus
ENSPCIG00000026887	RBFOX1	100	92.414	ENSCGRG00001013729	Rbfox1	73	92.414	Cricetulus_griseus_chok1gshd
ENSPCIG00000026887	RBFOX1	100	92.414	ENSCGRG00000003272	Rbfox1	73	92.414	Cricetulus_griseus_crigri
ENSPCIG00000026887	RBFOX1	100	73.540	ENSCSEG00000008840	rbfox1	71	74.227	Cynoglossus_semilaevis
ENSPCIG00000026887	RBFOX1	100	80.069	ENSDARG00000014746	rbfox1	100	79.231	Danio_rerio
ENSPCIG00000026887	RBFOX1	100	93.448	ENSDNOG00000043612	RBFOX1	70	93.448	Dasypus_novemcinctus
ENSPCIG00000026887	RBFOX1	100	92.069	ENSDORG00000010024	Rbfox1	72	92.069	Dipodomys_ordii
ENSPCIG00000026887	RBFOX1	89	79.008	ENSETEG00000003771	RBFOX1	62	79.008	Echinops_telfairi
ENSPCIG00000026887	RBFOX1	100	93.103	ENSEASG00005011599	RBFOX1	73	92.123	Equus_asinus_asinus
ENSPCIG00000026887	RBFOX1	100	91.781	ENSECAG00000012667	RBFOX1	71	92.509	Equus_caballus
ENSPCIG00000026887	RBFOX1	83	67.660	ENSELUG00000013096	rbfox1	66	67.234	Esox_lucius
ENSPCIG00000026887	RBFOX1	100	92.414	ENSFCAG00000025322	RBFOX1	71	92.509	Felis_catus
ENSPCIG00000026887	RBFOX1	77	92.411	ENSFALG00000004027	RBFOX1	67	92.411	Ficedula_albicollis
ENSPCIG00000026887	RBFOX1	100	92.414	ENSFDAG00000007388	RBFOX1	73	92.414	Fukomys_damarensis
ENSPCIG00000026887	RBFOX1	100	92.784	ENSGALG00000034325	RBFOX1	70	92.884	Gallus_gallus
ENSPCIG00000026887	RBFOX1	100	93.448	ENSGAGG00000023681	RBFOX1	77	93.448	Gopherus_agassizii
ENSPCIG00000026887	RBFOX1	100	94.014	ENSGGOG00000016871	-	72	94.014	Gorilla_gorilla
ENSPCIG00000026887	RBFOX1	100	92.414	ENSHGLG00000016944	RBFOX1	73	92.414	Heterocephalus_glaber_female
ENSPCIG00000026887	RBFOX1	100	92.414	ENSHGLG00100003272	RBFOX1	73	92.414	Heterocephalus_glaber_male
ENSPCIG00000026887	RBFOX1	86	75.502	ENSHCOG00000016419	rbfox1	64	75.502	Hippocampus_comes
ENSPCIG00000026887	RBFOX1	99	82.857	ENSIPUG00000015215	rbfox1	75	81.724	Ictalurus_punctatus
ENSPCIG00000026887	RBFOX1	100	92.069	ENSSTOG00000000322	RBFOX1	74	92.069	Ictidomys_tridecemlineatus
ENSPCIG00000026887	RBFOX1	100	92.414	ENSJJAG00000002575	Rbfox1	75	92.414	Jaculus_jaculus
ENSPCIG00000026887	RBFOX1	100	82.105	ENSLBEG00000014659	rbfox1	70	79.649	Labrus_bergylta
ENSPCIG00000026887	RBFOX1	100	82.935	ENSLOCG00000006675	rbfox1	74	82.935	Lepisosteus_oculatus
ENSPCIG00000026887	RBFOX1	100	93.127	ENSLAFG00000011480	RBFOX1	94	93.127	Loxodonta_africana
ENSPCIG00000026887	RBFOX1	100	94.014	ENSMFAG00000036447	RBFOX1	70	94.014	Macaca_fascicularis
ENSPCIG00000026887	RBFOX1	100	92.759	ENSMMUG00000003458	RBFOX1	73	92.759	Macaca_mulatta
ENSPCIG00000026887	RBFOX1	100	91.468	ENSMNEG00000032034	RBFOX1	74	90.823	Macaca_nemestrina
ENSPCIG00000026887	RBFOX1	100	91.468	ENSMLEG00000015382	RBFOX1	71	90.823	Mandrillus_leucophaeus
ENSPCIG00000026887	RBFOX1	100	76.552	ENSMAMG00000003142	rbfox1	72	76.552	Mastacembelus_armatus
ENSPCIG00000026887	RBFOX1	64	89.560	ENSMGAG00000008606	RBFOX1	61	89.266	Meleagris_gallopavo
ENSPCIG00000026887	RBFOX1	87	55.600	ENSMAUG00000020570	Rbfox1	69	54.800	Mesocricetus_auratus
ENSPCIG00000026887	RBFOX1	100	90.823	ENSMICG00000034286	RBFOX1	71	91.822	Microcebus_murinus
ENSPCIG00000026887	RBFOX1	100	92.069	ENSMOCG00000020932	Rbfox1	76	92.069	Microtus_ochrogaster
ENSPCIG00000026887	RBFOX1	86	77.459	ENSMMOG00000009716	rbfox1	61	74.590	Mola_mola
ENSPCIG00000026887	RBFOX1	84	94.382	ENSMODG00000005826	RBFOX1	75	94.382	Monodelphis_domestica
ENSPCIG00000026887	RBFOX1	100	78.276	ENSMALG00000003337	rbfox1	69	78.276	Monopterus_albus
ENSPCIG00000026887	RBFOX1	100	92.414	MGP_CAROLIEiJ_G0020427	Rbfox1	73	92.414	Mus_caroli
ENSPCIG00000026887	RBFOX1	100	92.069	ENSMUSG00000008658	Rbfox1	99	83.582	Mus_musculus
ENSPCIG00000026887	RBFOX1	100	92.414	MGP_PahariEiJ_G0016135	Rbfox1	73	92.414	Mus_pahari
ENSPCIG00000026887	RBFOX1	100	91.724	MGP_SPRETEiJ_G0021321	Rbfox1	73	91.724	Mus_spretus
ENSPCIG00000026887	RBFOX1	84	92.135	ENSMPUG00000014822	RBFOX1	68	92.135	Mustela_putorius_furo
ENSPCIG00000026887	RBFOX1	100	93.103	ENSMLUG00000015896	RBFOX1	94	93.103	Myotis_lucifugus
ENSPCIG00000026887	RBFOX1	100	92.069	ENSNGAG00000023276	Rbfox1	75	92.069	Nannospalax_galili
ENSPCIG00000026887	RBFOX1	100	67.450	ENSNBRG00000011084	rbfox1	68	67.450	Neolamprologus_brichardi
ENSPCIG00000026887	RBFOX1	100	91.438	ENSNLEG00000010017	-	70	91.126	Nomascus_leucogenys
ENSPCIG00000026887	RBFOX1	74	100.000	ENSMEUG00000012525	RBFOX1	50	100.000	Notamacropus_eugenii
ENSPCIG00000026887	RBFOX1	65	99.306	ENSOPRG00000006199	-	55	99.306	Ochotona_princeps
ENSPCIG00000026887	RBFOX1	100	92.414	ENSODEG00000013166	RBFOX1	73	92.414	Octodon_degus
ENSPCIG00000026887	RBFOX1	84	94.007	ENSOANG00000002379	RBFOX1	71	94.007	Ornithorhynchus_anatinus
ENSPCIG00000026887	RBFOX1	100	92.759	ENSOGAG00000025535	RBFOX1	73	92.759	Otolemur_garnettii
ENSPCIG00000026887	RBFOX1	51	86.806	ENSOARG00000005135	RBFOX1	57	86.806	Ovis_aries
ENSPCIG00000026887	RBFOX1	100	94.014	ENSPPAG00000036238	-	75	92.759	Pan_paniscus
ENSPCIG00000026887	RBFOX1	100	91.126	ENSPPRG00000006546	RBFOX1	70	91.126	Panthera_pardus
ENSPCIG00000026887	RBFOX1	100	80.556	ENSPTIG00000021154	RBFOX1	73	79.725	Panthera_tigris_altaica
ENSPCIG00000026887	RBFOX1	100	94.014	ENSPTRG00000007744	RBFOX1	72	94.014	Pan_troglodytes
ENSPCIG00000026887	RBFOX1	100	91.468	ENSPANG00000026500	RBFOX1	70	93.893	Papio_anubis
ENSPCIG00000026887	RBFOX1	100	81.379	ENSPKIG00000009667	-	70	79.928	Paramormyrops_kingsleyae
ENSPCIG00000026887	RBFOX1	100	93.448	ENSPSIG00000006523	RBFOX1	73	93.448	Pelodiscus_sinensis
ENSPCIG00000026887	RBFOX1	100	92.414	ENSPEMG00000017607	Rbfox1	73	92.414	Peromyscus_maniculatus_bairdii
ENSPCIG00000026887	RBFOX1	84	92.884	ENSPPYG00000007079	-	68	92.884	Pongo_abelii
ENSPCIG00000026887	RBFOX1	86	91.304	ENSPCAG00000002630	RBFOX1	66	91.304	Procavia_capensis
ENSPCIG00000026887	RBFOX1	100	91.468	ENSPCOG00000025687	RBFOX1	70	94.253	Propithecus_coquereli
ENSPCIG00000026887	RBFOX1	100	81.518	ENSPVAG00000013467	RBFOX1	70	86.942	Pteropus_vampyrus
ENSPCIG00000026887	RBFOX1	100	82.414	ENSPNAG00000023109	rbfox1	71	82.414	Pygocentrus_nattereri
ENSPCIG00000026887	RBFOX1	100	92.069	ENSRNOG00000002827	Rbfox1	70	92.069	Rattus_norvegicus
ENSPCIG00000026887	RBFOX1	100	92.759	ENSRBIG00000044478	RBFOX1	75	92.759	Rhinopithecus_bieti
ENSPCIG00000026887	RBFOX1	100	91.468	ENSRROG00000044411	RBFOX1	70	91.468	Rhinopithecus_roxellana
ENSPCIG00000026887	RBFOX1	100	94.014	ENSSBOG00000033726	RBFOX1	72	94.014	Saimiri_boliviensis_boliviensis
ENSPCIG00000026887	RBFOX1	100	89.310	ENSSHAG00000009257	RBFOX1	73	89.310	Sarcophilus_harrisii
ENSPCIG00000026887	RBFOX1	86	79.518	ENSSFOG00015009955	-	56	80.723	Scleropages_formosus
ENSPCIG00000026887	RBFOX1	100	70.833	ENSSFOG00015023675	rbfox1	68	70.833	Scleropages_formosus
ENSPCIG00000026887	RBFOX1	100	78.351	ENSSMAG00000015505	rbfox1	64	78.351	Scophthalmus_maximus
ENSPCIG00000026887	RBFOX1	100	80.634	ENSSDUG00000016413	rbfox1	70	78.169	Seriola_dumerili
ENSPCIG00000026887	RBFOX1	86	77.459	ENSSLDG00000009353	rbfox1	61	74.590	Seriola_lalandi_dorsalis
ENSPCIG00000026887	RBFOX1	56	100.000	ENSSARG00000004936	-	65	100.000	Sorex_araneus
ENSPCIG00000026887	RBFOX1	86	80.488	ENSSPUG00000009732	RBFOX1	62	81.301	Sphenodon_punctatus
ENSPCIG00000026887	RBFOX1	100	80.634	ENSSPAG00000009723	rbfox1	71	78.169	Stegastes_partitus
ENSPCIG00000026887	RBFOX1	100	89.623	ENSSSCG00000007917	RBFOX1	75	92.509	Sus_scrofa
ENSPCIG00000026887	RBFOX1	100	93.448	ENSTGUG00000004562	RBFOX1	75	93.448	Taeniopygia_guttata
ENSPCIG00000026887	RBFOX1	100	78.966	ENSTRUG00000020940	rbfox1	69	78.621	Takifugu_rubripes
ENSPCIG00000026887	RBFOX1	86	53.378	ENSTNIG00000002567	rbfox1	70	72.131	Tetraodon_nigroviridis
ENSPCIG00000026887	RBFOX1	81	99.306	ENSTBEG00000009169	-	55	99.306	Tupaia_belangeri
ENSPCIG00000026887	RBFOX1	100	91.468	ENSTTRG00000005700	RBFOX1	70	91.468	Tursiops_truncatus
ENSPCIG00000026887	RBFOX1	100	94.014	ENSUAMG00000024633	RBFOX1	72	94.014	Ursus_americanus
ENSPCIG00000026887	RBFOX1	100	81.690	ENSUMAG00000003579	RBFOX1	71	80.282	Ursus_maritimus
ENSPCIG00000026887	RBFOX1	100	91.468	ENSVPAG00000001284	RBFOX1	70	91.468	Vicugna_pacos
ENSPCIG00000026887	RBFOX1	100	92.759	ENSVVUG00000017311	RBFOX1	71	92.884	Vulpes_vulpes