EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000027633 (Gene tree)
Gene ID: 110192697
Gene Symbol: -
Alias: -
Full Name: single-stranded DNA cytosine deaminase-like
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 22682 bases
Position: chrFUWB01000839.1:1084494-1107175
Accession: 110192697
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000037493	APOBEC_N	PF08210.11	9.6e-27	1	1
ENSPCIP00000037493	APOBEC_C	PF05240.14	5.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000046189	-	1799	XM_020964042	ENSPCIP00000037493	260 (aa)	XP_020819701	UPI000A28104C

Gene Model

Click here to download ENSPCIG00000027633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000027633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000027633	-	63	32.353	ENSPCIG00000023974	AICDA	83	32.353
ENSPCIG00000027633	-	58	31.126	ENSPCIG00000023973	APOBEC1	61	31.126

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000027633	-	67	45.087	ENSACAG00000024915	-	93	45.087	Anolis_carolinensis
ENSPCIG00000027633	-	67	40.230	ENSLACG00000015876	-	94	40.230	Latimeria_chalumnae
ENSPCIG00000027633	-	99	35.115	ENSLOCG00000003595	-	94	35.115	Lepisosteus_oculatus
ENSPCIG00000027633	-	100	74.231	ENSMODG00000029467	-	100	74.231	Monodelphis_domestica
ENSPCIG00000027633	-	68	34.831	ENSPKIG00000010937	-	86	34.831	Paramormyrops_kingsleyae
ENSPCIG00000027633	-	100	80.000	ENSSHAG00000005252	-	100	80.000	Sarcophilus_harrisii
ENSPCIG00000027633	-	59	40.645	ENSSFOG00015006223	-	90	40.645	Scleropages_formosus