EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000028037 (Gene tree)
Gene ID: 110216869
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 168739 bases
Position: chrFUWB01002950.1:6464-175202
Accession: 19057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000038080	ResIII	PF04851.15	8.2e-08	1	1
ENSPCIP00000038082	ResIII	PF04851.15	8.5e-08	1	1
ENSPCIP00000038086	ResIII	PF04851.15	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000046869	CHD6-201	8191	-	ENSPCIP00000038080	2677 (aa)	-	-
ENSPCIT00000046872	CHD6-202	8245	-	ENSPCIP00000038082	2717 (aa)	-	-
ENSPCIT00000046876	CHD6-203	8252	-	ENSPCIP00000038086	2717 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000028037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000028037's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000028037	CHD6	64	60.238	ENSPCIG00000020931	CHD8	72	70.833
ENSPCIG00000028037	CHD6	70	63.388	ENSPCIG00000017215	CHD9	85	65.235
ENSPCIG00000028037	CHD6	55	68.985	ENSPCIG00000000025	-	67	66.885

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000028037	CHD6	100	81.122	ENSG00000124177	CHD6	99	96.525	Homo_sapiens
ENSPCIG00000028037	CHD6	74	75.694	ENSAPOG00000013736	chd6	65	75.826	Acanthochromis_polyacanthus
ENSPCIG00000028037	CHD6	100	80.550	ENSAMEG00000009496	CHD6	100	80.550	Ailuropoda_melanoleuca
ENSPCIG00000028037	CHD6	78	72.461	ENSATEG00000005608	chd6	64	75.947	Anabas_testudineus
ENSPCIG00000028037	CHD6	93	81.549	ENSAPLG00000015592	CHD6	99	73.913	Anas_platyrhynchos
ENSPCIG00000028037	CHD6	99	70.425	ENSACAG00000006842	CHD6	99	69.368	Anolis_carolinensis
ENSPCIG00000028037	CHD6	100	80.528	ENSANAG00000037548	CHD6	99	91.743	Aotus_nancymaae
ENSPCIG00000028037	CHD6	79	71.919	ENSAMXG00000009576	chd6	74	73.267	Astyanax_mexicanus
ENSPCIG00000028037	CHD6	100	78.234	ENSBTAG00000005733	CHD6	100	77.794	Bos_taurus
ENSPCIG00000028037	CHD6	100	80.821	ENSCJAG00000017920	CHD6	99	91.927	Callithrix_jacchus
ENSPCIG00000028037	CHD6	100	80.587	ENSCAFG00000009236	CHD6	100	80.183	Canis_familiaris
ENSPCIG00000028037	CHD6	99	80.472	ENSCAFG00020012906	CHD6	95	94.402	Canis_lupus_dingo
ENSPCIG00000028037	CHD6	100	78.124	ENSCHIG00000017606	CHD6	100	77.684	Capra_hircus
ENSPCIG00000028037	CHD6	84	80.044	ENSTSYG00000014635	CHD6	100	80.044	Carlito_syrichta
ENSPCIG00000028037	CHD6	100	79.523	ENSCPOG00000015641	CHD6	100	79.055	Cavia_porcellus
ENSPCIG00000028037	CHD6	100	80.675	ENSCCAG00000036828	CHD6	99	91.743	Cebus_capucinus
ENSPCIG00000028037	CHD6	100	80.711	ENSCATG00000039248	CHD6	99	91.743	Cercocebus_atys
ENSPCIG00000028037	CHD6	100	80.015	ENSCLAG00000013743	CHD6	100	79.502	Chinchilla_lanigera
ENSPCIG00000028037	CHD6	100	80.931	ENSCSAG00000013997	CHD6	100	80.418	Chlorocebus_sabaeus
ENSPCIG00000028037	CHD6	91	84.560	ENSCHOG00000012647	CHD6	95	83.937	Choloepus_hoffmanni
ENSPCIG00000028037	CHD6	99	76.112	ENSCPBG00000019382	CHD6	99	76.166	Chrysemys_picta_bellii
ENSPCIG00000028037	CHD6	100	81.041	ENSCANG00000043435	CHD6	99	91.743	Colobus_angolensis_palliatus
ENSPCIG00000028037	CHD6	100	78.760	ENSCGRG00001002694	Chd6	100	78.173	Cricetulus_griseus_chok1gshd
ENSPCIG00000028037	CHD6	82	74.337	ENSDARG00000017244	chd6	80	74.036	Danio_rerio
ENSPCIG00000028037	CHD6	99	79.794	ENSDNOG00000004176	CHD6	99	79.279	Dasypus_novemcinctus
ENSPCIG00000028037	CHD6	99	80.332	ENSEASG00005023433	CHD6	95	95.946	Equus_asinus_asinus
ENSPCIG00000028037	CHD6	99	80.580	ENSECAG00000011761	CHD6	100	80.176	Equus_caballus
ENSPCIG00000028037	CHD6	71	80.600	ENSELUG00000012309	chd6	91	80.600	Esox_lucius
ENSPCIG00000028037	CHD6	100	80.580	ENSFCAG00000003572	CHD6	100	80.194	Felis_catus
ENSPCIG00000028037	CHD6	99	72.888	ENSFALG00000012563	CHD6	99	71.913	Ficedula_albicollis
ENSPCIG00000028037	CHD6	99	80.140	ENSFDAG00000013791	CHD6	99	79.624	Fukomys_damarensis
ENSPCIG00000028037	CHD6	73	69.677	ENSGMOG00000011715	chd6	85	69.821	Gadus_morhua
ENSPCIG00000028037	CHD6	76	71.560	ENSGACG00000000037	chd6	84	70.630	Gasterosteus_aculeatus
ENSPCIG00000028037	CHD6	100	81.085	ENSGGOG00000013123	CHD6	99	91.743	Gorilla_gorilla
ENSPCIG00000028037	CHD6	77	72.418	ENSHBUG00000014701	chd6	64	75.432	Haplochromis_burtoni
ENSPCIG00000028037	CHD6	100	80.156	ENSHGLG00000004548	CHD6	100	79.561	Heterocephalus_glaber_female
ENSPCIG00000028037	CHD6	100	80.117	ENSHGLG00100006401	CHD6	100	79.530	Heterocephalus_glaber_male
ENSPCIG00000028037	CHD6	78	75.968	ENSIPUG00000003692	chd6	74	76.862	Ictalurus_punctatus
ENSPCIG00000028037	CHD6	100	80.119	ENSSTOG00000013382	CHD6	100	79.604	Ictidomys_tridecemlineatus
ENSPCIG00000028037	CHD6	86	78.072	ENSLACG00000010881	CHD6	86	77.784	Latimeria_chalumnae
ENSPCIG00000028037	CHD6	73	80.707	ENSLOCG00000007386	chd6	85	75.708	Lepisosteus_oculatus
ENSPCIG00000028037	CHD6	100	80.778	ENSLAFG00000012144	CHD6	100	80.191	Loxodonta_africana
ENSPCIG00000028037	CHD6	100	81.041	ENSMFAG00000032830	CHD6	99	91.743	Macaca_fascicularis
ENSPCIG00000028037	CHD6	100	81.041	ENSMMUG00000020458	CHD6	99	91.743	Macaca_mulatta
ENSPCIG00000028037	CHD6	100	81.122	ENSMNEG00000040847	CHD6	99	91.743	Macaca_nemestrina
ENSPCIG00000028037	CHD6	100	80.902	ENSMLEG00000031965	CHD6	99	91.743	Mandrillus_leucophaeus
ENSPCIG00000028037	CHD6	79	72.057	ENSMAMG00000013111	chd6	64	75.649	Mastacembelus_armatus
ENSPCIG00000028037	CHD6	99	74.588	ENSMGAG00000001121	CHD6	99	73.717	Meleagris_gallopavo
ENSPCIG00000028037	CHD6	100	80.183	ENSMICG00000016641	CHD6	99	91.376	Microcebus_murinus
ENSPCIG00000028037	CHD6	89	95.165	ENSMODG00000000720	-	100	95.165	Monodelphis_domestica
ENSPCIG00000028037	CHD6	100	77.578	MGP_CAROLIEiJ_G0024604	Chd6	100	88.795	Mus_caroli
ENSPCIG00000028037	CHD6	100	77.505	ENSMUSG00000057133	Chd6	100	88.627	Mus_musculus
ENSPCIG00000028037	CHD6	100	77.619	MGP_PahariEiJ_G0026048	Chd6	100	89.048	Mus_pahari
ENSPCIG00000028037	CHD6	100	77.468	MGP_SPRETEiJ_G0025526	Chd6	100	88.711	Mus_spretus
ENSPCIG00000028037	CHD6	100	79.788	ENSMPUG00000017695	CHD6	100	79.348	Mustela_putorius_furo
ENSPCIG00000028037	CHD6	100	80.022	ENSMLUG00000016247	CHD6	100	79.545	Myotis_lucifugus
ENSPCIG00000028037	CHD6	78	73.760	ENSNBRG00000013839	chd6	79	73.945	Neolamprologus_brichardi
ENSPCIG00000028037	CHD6	100	79.237	ENSNLEG00000006496	CHD6	100	78.723	Nomascus_leucogenys
ENSPCIG00000028037	CHD6	100	77.273	ENSOPRG00000013376	-	100	76.723	Ochotona_princeps
ENSPCIG00000028037	CHD6	81	75.420	ENSONIG00000000393	chd6	83	75.326	Oreochromis_niloticus
ENSPCIG00000028037	CHD6	100	72.585	ENSOANG00000014347	CHD6	94	76.165	Ornithorhynchus_anatinus
ENSPCIG00000028037	CHD6	99	78.406	ENSOCUG00000012394	CHD6	100	77.855	Oryctolagus_cuniculus
ENSPCIG00000028037	CHD6	79	70.836	ENSORLG00020021891	chd6	95	85.772	Oryzias_latipes_hni
ENSPCIG00000028037	CHD6	99	79.697	ENSOGAG00000002427	CHD6	99	79.067	Otolemur_garnettii
ENSPCIG00000028037	CHD6	99	76.302	ENSOARG00000002597	CHD6	100	75.862	Ovis_aries
ENSPCIG00000028037	CHD6	100	80.499	ENSPPRG00000014756	CHD6	100	80.117	Panthera_pardus
ENSPCIG00000028037	CHD6	100	80.425	ENSPTIG00000011094	CHD6	100	80.044	Panthera_tigris_altaica
ENSPCIG00000028037	CHD6	100	81.195	ENSPTRG00000013504	CHD6	99	91.743	Pan_troglodytes
ENSPCIG00000028037	CHD6	100	81.078	ENSPANG00000025554	CHD6	99	91.927	Papio_anubis
ENSPCIG00000028037	CHD6	81	73.778	ENSPKIG00000005578	chd6	80	73.329	Paramormyrops_kingsleyae
ENSPCIG00000028037	CHD6	77	76.487	ENSPMGG00000014877	chd6	86	75.017	Periophthalmus_magnuspinnatus
ENSPCIG00000028037	CHD6	78	70.549	ENSPLAG00000003128	chd6	68	73.252	Poecilia_latipinna
ENSPCIG00000028037	CHD6	73	72.687	ENSPREG00000022653	chd6	99	86.081	Poecilia_reticulata
ENSPCIG00000028037	CHD6	100	80.982	ENSPPYG00000011016	CHD6	100	80.469	Pongo_abelii
ENSPCIG00000028037	CHD6	99	80.389	ENSPCOG00000001089	CHD6	99	91.560	Propithecus_coquereli
ENSPCIG00000028037	CHD6	78	75.049	ENSPNYG00000022516	chd6	79	75.526	Pundamilia_nyererei
ENSPCIG00000028037	CHD6	78	73.834	ENSPNAG00000012825	chd6	76	74.984	Pygocentrus_nattereri
ENSPCIG00000028037	CHD6	100	76.903	ENSRNOG00000016744	Chd6	100	76.354	Rattus_norvegicus
ENSPCIG00000028037	CHD6	100	80.638	ENSSBOG00000022089	CHD6	99	91.743	Saimiri_boliviensis_boliviensis
ENSPCIG00000028037	CHD6	99	94.877	ENSSHAG00000017072	CHD6	99	94.877	Sarcophilus_harrisii
ENSPCIG00000028037	CHD6	79	76.743	ENSSFOG00015012920	chd6	76	77.092	Scleropages_formosus
ENSPCIG00000028037	CHD6	59	98.026	ENSSARG00000002615	-	61	98.026	Sorex_araneus
ENSPCIG00000028037	CHD6	100	79.604	ENSSSCG00000007360	CHD6	100	80.715	Sus_scrofa
ENSPCIG00000028037	CHD6	91	82.067	ENSTGUG00000003179	CHD6	92	82.367	Taeniopygia_guttata
ENSPCIG00000028037	CHD6	74	77.263	ENSTNIG00000017487	chd6	83	75.398	Tetraodon_nigroviridis
ENSPCIG00000028037	CHD6	100	76.878	ENSTTRG00000013438	CHD6	100	76.402	Tursiops_truncatus
ENSPCIG00000028037	CHD6	99	79.322	ENSUAMG00000024036	CHD6	95	94.402	Ursus_americanus
ENSPCIG00000028037	CHD6	99	80.605	ENSUMAG00000002017	CHD6	95	94.402	Ursus_maritimus
ENSPCIG00000028037	CHD6	94	84.347	ENSVPAG00000007941	CHD6	96	84.347	Vicugna_pacos
ENSPCIG00000028037	CHD6	100	80.734	ENSVVUG00000029164	CHD6	100	80.330	Vulpes_vulpes
ENSPCIG00000028037	CHD6	88	72.833	ENSXETG00000021445	chd6	87	72.875	Xenopus_tropicalis