EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000028092 (Gene tree)
Gene ID: 110198872
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 128378 bases
Position: chrFUWB01002969.1:58474-186851
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000038161	KH_1	PF00013.29	1.5e-55	1	3
ENSPCIP00000038161	KH_1	PF00013.29	1.5e-55	2	3
ENSPCIP00000038161	KH_1	PF00013.29	1.5e-55	3	3
ENSPCIP00000038162	KH_1	PF00013.29	2.9e-37	1	2
ENSPCIP00000038162	KH_1	PF00013.29	2.9e-37	2	2
ENSPCIP00000038157	KH_1	PF00013.29	3.6e-37	1	2
ENSPCIP00000038157	KH_1	PF00013.29	3.6e-37	2	2
ENSPCIP00000038159	KH_1	PF00013.29	5e-37	1	2
ENSPCIP00000038159	KH_1	PF00013.29	5e-37	2	2
ENSPCIP00000038161	KH_2	PF07650.17	2.3e-15	1	1
ENSPCIP00000038159	KH_2	PF07650.17	7.6e-12	1	1
ENSPCIP00000038162	KH_2	PF07650.17	2.4e-11	1	1
ENSPCIP00000038157	KH_2	PF07650.17	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000046970	-	1569	-	ENSPCIP00000038159	263 (aa)	-	-
ENSPCIT00000046972	-	1029	-	ENSPCIP00000038161	342 (aa)	-	-
ENSPCIT00000046975	-	1030	-	ENSPCIP00000038162	225 (aa)	-	-
ENSPCIT00000046968	-	1694	-	ENSPCIP00000038157	240 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000028092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000028092's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000028092	-	62	37.143	ENSPCIG00000025516	KHSRP	54	37.143
ENSPCIG00000028092	-	88	68.528	ENSPCIG00000018151	PCBP4	76	58.434
ENSPCIG00000028092	-	99	58.431	ENSPCIG00000013794	-	96	63.035
ENSPCIG00000028092	-	99	80.263	ENSPCIG00000006658	-	99	75.072
ENSPCIG00000028092	-	73	52.857	ENSPCIG00000027665	HNRNPK	56	52.857
ENSPCIG00000028092	-	98	35.211	ENSPCIG00000007929	IGF2BP3	57	34.307
ENSPCIG00000028092	-	86	48.705	ENSPCIG00000030555	-	99	48.718
ENSPCIG00000028092	-	97	59.226	ENSPCIG00000013664	-	92	59.226
ENSPCIG00000028092	-	61	40.625	ENSPCIG00000022984	-	52	40.625
ENSPCIG00000028092	-	70	34.559	ENSPCIG00000013111	IGF2BP1	81	32.836
ENSPCIG00000028092	-	94	41.270	ENSPCIG00000024114	FUBP3	65	41.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000028092	-	96	87.558	ENSAPOG00000020003	pcbp3	87	85.417	Acanthochromis_polyacanthus
ENSPCIG00000028092	-	99	89.021	ENSAPOG00000016582	-	98	89.021	Acanthochromis_polyacanthus
ENSPCIG00000028092	-	99	93.722	ENSAMEG00000001697	-	100	90.368	Ailuropoda_melanoleuca
ENSPCIG00000028092	-	99	89.318	ENSACIG00000002739	-	98	89.318	Amphilophus_citrinellus
ENSPCIG00000028092	-	96	93.272	ENSACIG00000010933	pcbp3	93	93.272	Amphilophus_citrinellus
ENSPCIG00000028092	-	96	91.244	ENSAOCG00000008592	-	96	89.571	Amphiprion_ocellaris
ENSPCIG00000028092	-	87	96.471	ENSAOCG00000007806	-	100	85.759	Amphiprion_ocellaris
ENSPCIG00000028092	-	99	89.021	ENSAPEG00000005209	-	98	89.021	Amphiprion_percula
ENSPCIG00000028092	-	96	95.441	ENSAPEG00000008011	pcbp3	93	95.441	Amphiprion_percula
ENSPCIG00000028092	-	99	88.427	ENSATEG00000009833	-	98	88.427	Anabas_testudineus
ENSPCIG00000028092	-	95	93.865	ENSATEG00000015787	-	98	93.865	Anabas_testudineus
ENSPCIG00000028092	-	97	82.303	ENSAPLG00000008951	-	85	89.520	Anas_platyrhynchos
ENSPCIG00000028092	-	99	93.694	ENSAPLG00000002975	-	100	89.045	Anas_platyrhynchos
ENSPCIG00000028092	-	100	94.199	ENSACAG00000004607	-	100	94.199	Anolis_carolinensis
ENSPCIG00000028092	-	99	88.856	ENSACAG00000009819	-	99	88.856	Anolis_carolinensis
ENSPCIG00000028092	-	96	91.459	ENSANAG00000030702	-	100	91.459	Aotus_nancymaae
ENSPCIG00000028092	-	96	95.137	ENSACLG00000011835	pcbp3	93	95.137	Astatotilapia_calliptera
ENSPCIG00000028092	-	99	90.208	ENSACLG00000003801	-	98	90.208	Astatotilapia_calliptera
ENSPCIG00000028092	-	96	86.636	ENSAMXG00000013588	-	98	85.583	Astyanax_mexicanus
ENSPCIG00000028092	-	97	65.909	ENSAMXG00000001760	zgc:110045	73	65.909	Astyanax_mexicanus
ENSPCIG00000028092	-	96	97.248	ENSAMXG00000003440	pcbp3	93	97.248	Astyanax_mexicanus
ENSPCIG00000028092	-	99	93.722	ENSCAFG00020019472	-	74	99.517	Canis_lupus_dingo
ENSPCIG00000028092	-	99	93.722	ENSCSAG00000007440	-	91	92.398	Chlorocebus_sabaeus
ENSPCIG00000028092	-	97	88.520	ENSCPBG00000000733	-	92	89.302	Chrysemys_picta_bellii
ENSPCIG00000028092	-	99	94.144	ENSCPBG00000012151	-	100	87.845	Chrysemys_picta_bellii
ENSPCIG00000028092	-	96	85.714	ENSCSEG00000000822	pcbp3	97	85.890	Cynoglossus_semilaevis
ENSPCIG00000028092	-	97	85.321	ENSCSEG00000016984	-	98	73.278	Cynoglossus_semilaevis
ENSPCIG00000028092	-	96	95.137	ENSCVAG00000014482	pcbp3	93	95.137	Cyprinodon_variegatus
ENSPCIG00000028092	-	99	90.323	ENSCVAG00000005262	-	99	90.323	Cyprinodon_variegatus
ENSPCIG00000028092	-	99	97.361	ENSDARG00000054378	pcbp3	99	97.361	Danio_rerio
ENSPCIG00000028092	-	100	79.825	ENSETEG00000015988	-	100	79.825	Echinops_telfairi
ENSPCIG00000028092	-	90	75.490	ENSEBUG00000005495	pcbp3	73	64.684	Eptatretus_burgeri
ENSPCIG00000028092	-	96	68.647	ENSEBUG00000016192	pcbp3	99	68.836	Eptatretus_burgeri
ENSPCIG00000028092	-	97	82.960	ENSEBUG00000007485	-	93	82.960	Eptatretus_burgeri
ENSPCIG00000028092	-	95	96.330	ENSELUG00000003521	pcbp3	93	96.330	Esox_lucius
ENSPCIG00000028092	-	96	92.130	ENSELUG00000001560	-	97	84.615	Esox_lucius
ENSPCIG00000028092	-	97	82.303	ENSFALG00000004411	-	75	82.303	Ficedula_albicollis
ENSPCIG00000028092	-	99	93.694	ENSFALG00000003949	-	100	92.105	Ficedula_albicollis
ENSPCIG00000028092	-	96	87.558	ENSFHEG00000016615	pcbp3	94	86.626	Fundulus_heteroclitus
ENSPCIG00000028092	-	99	88.270	ENSFHEG00000006539	-	99	88.270	Fundulus_heteroclitus
ENSPCIG00000028092	-	90	85.222	ENSGMOG00000011992	pcbp3	95	74.644	Gadus_morhua
ENSPCIG00000028092	-	95	66.379	ENSGMOG00000008611	-	99	66.379	Gadus_morhua
ENSPCIG00000028092	-	94	99.465	ENSGALG00000004394	-	100	99.465	Gallus_gallus
ENSPCIG00000028092	-	99	87.647	ENSGALG00000013155	-	99	86.186	Gallus_gallus
ENSPCIG00000028092	-	96	91.705	ENSGAFG00000010274	-	93	90.214	Gambusia_affinis
ENSPCIG00000028092	-	97	91.239	ENSGAFG00000011430	pcbp3	95	91.239	Gambusia_affinis
ENSPCIG00000028092	-	99	80.672	ENSGACG00000014955	-	98	80.672	Gasterosteus_aculeatus
ENSPCIG00000028092	-	96	91.244	ENSGACG00000002266	-	98	84.078	Gasterosteus_aculeatus
ENSPCIG00000028092	-	86	90.256	ENSGAGG00000006956	-	88	91.284	Gopherus_agassizii
ENSPCIG00000028092	-	87	93.529	ENSGAGG00000000271	-	100	84.138	Gopherus_agassizii
ENSPCIG00000028092	-	99	90.208	ENSHBUG00000021782	-	98	90.208	Haplochromis_burtoni
ENSPCIG00000028092	-	96	94.833	ENSHBUG00000010697	pcbp3	93	94.833	Haplochromis_burtoni
ENSPCIG00000028092	-	96	95.427	ENSHCOG00000017868	pcbp3	93	95.427	Hippocampus_comes
ENSPCIG00000028092	-	99	86.647	ENSHCOG00000006067	-	91	97.340	Hippocampus_comes
ENSPCIG00000028092	-	99	97.361	ENSIPUG00000006238	pcbp3	99	97.361	Ictalurus_punctatus
ENSPCIG00000028092	-	96	95.441	ENSKMAG00000003046	pcbp3	93	95.441	Kryptolebias_marmoratus
ENSPCIG00000028092	-	96	90.783	ENSKMAG00000018530	-	98	84.866	Kryptolebias_marmoratus
ENSPCIG00000028092	-	98	85.928	ENSLBEG00000006201	pcbp3	96	85.928	Labrus_bergylta
ENSPCIG00000028092	-	99	77.448	ENSLBEG00000006542	-	98	78.932	Labrus_bergylta
ENSPCIG00000028092	-	97	92.113	ENSLACG00000010386	pcbp3	75	92.113	Latimeria_chalumnae
ENSPCIG00000028092	-	97	82.153	ENSLACG00000010804	zgc:110045	74	82.153	Latimeria_chalumnae
ENSPCIG00000028092	-	100	97.661	ENSLOCG00000009369	pcbp3	100	97.661	Lepisosteus_oculatus
ENSPCIG00000028092	-	97	87.613	ENSLOCG00000005058	zgc:110045	81	87.613	Lepisosteus_oculatus
ENSPCIG00000028092	-	99	87.834	ENSMAMG00000011620	-	98	87.834	Mastacembelus_armatus
ENSPCIG00000028092	-	96	87.558	ENSMAMG00000022336	pcbp3	92	86.322	Mastacembelus_armatus
ENSPCIG00000028092	-	96	93.272	ENSMZEG00005008993	pcbp3	96	92.661	Maylandia_zebra
ENSPCIG00000028092	-	96	86.239	ENSMZEG00005014882	-	98	82.402	Maylandia_zebra
ENSPCIG00000028092	-	97	82.584	ENSMGAG00000006794	-	75	82.584	Meleagris_gallopavo
ENSPCIG00000028092	-	97	83.286	ENSMGAG00000001883	-	97	83.286	Meleagris_gallopavo
ENSPCIG00000028092	-	99	87.537	ENSMMOG00000005216	-	98	87.537	Mola_mola
ENSPCIG00000028092	-	90	91.220	ENSMMOG00000000730	pcbp3	86	85.976	Mola_mola
ENSPCIG00000028092	-	69	90.654	ENSMODG00000027884	-	93	90.654	Monodelphis_domestica
ENSPCIG00000028092	-	95	93.558	ENSMALG00000000691	pcbp3	93	93.558	Monopterus_albus
ENSPCIG00000028092	-	99	84.753	ENSMPUG00000001779	-	92	81.492	Mustela_putorius_furo
ENSPCIG00000028092	-	95	89.426	ENSNBRG00000016714	-	100	84.527	Neolamprologus_brichardi
ENSPCIG00000028092	-	96	92.966	ENSNBRG00000016409	-	93	92.966	Neolamprologus_brichardi
ENSPCIG00000028092	-	96	90.286	ENSOPRG00000003431	-	100	90.286	Ochotona_princeps
ENSPCIG00000028092	-	95	90.173	ENSONIG00000012122	-	96	90.173	Oreochromis_niloticus
ENSPCIG00000028092	-	99	90.208	ENSONIG00000004611	-	98	90.208	Oreochromis_niloticus
ENSPCIG00000028092	-	99	93.274	ENSOCUG00000002696	-	91	92.105	Oryctolagus_cuniculus
ENSPCIG00000028092	-	99	90.504	ENSORLG00000022739	-	98	90.504	Oryzias_latipes
ENSPCIG00000028092	-	96	91.244	ENSORLG00000000059	pcbp3	98	89.571	Oryzias_latipes
ENSPCIG00000028092	-	99	90.208	ENSORLG00020006124	-	98	90.208	Oryzias_latipes_hni
ENSPCIG00000028092	-	96	91.244	ENSORLG00020012671	pcbp3	97	88.358	Oryzias_latipes_hni
ENSPCIG00000028092	-	96	91.244	ENSORLG00015000429	pcbp3	97	88.358	Oryzias_latipes_hsok
ENSPCIG00000028092	-	96	91.705	ENSORLG00015008051	-	95	89.222	Oryzias_latipes_hsok
ENSPCIG00000028092	-	96	86.262	ENSOMEG00000020811	pcbp3	99	86.262	Oryzias_melastigma
ENSPCIG00000028092	-	99	90.208	ENSOMEG00000020162	-	98	90.208	Oryzias_melastigma
ENSPCIG00000028092	-	100	86.957	ENSOGAG00000008044	-	100	86.957	Otolemur_garnettii
ENSPCIG00000028092	-	96	78.802	ENSPKIG00000020913	-	93	79.535	Paramormyrops_kingsleyae
ENSPCIG00000028092	-	90	98.030	ENSPKIG00000019329	pcbp3	98	89.021	Paramormyrops_kingsleyae
ENSPCIG00000028092	-	92	87.805	ENSPSIG00000008350	-	68	87.805	Pelodiscus_sinensis
ENSPCIG00000028092	-	100	79.944	ENSPSIG00000014970	-	100	80.501	Pelodiscus_sinensis
ENSPCIG00000028092	-	95	96.308	ENSPMGG00000022383	pcbp3	93	96.308	Periophthalmus_magnuspinnatus
ENSPCIG00000028092	-	96	73.516	ENSPMAG00000004551	pcbp3	91	69.118	Petromyzon_marinus
ENSPCIG00000028092	-	86	89.119	ENSPMAG00000004637	-	100	89.119	Petromyzon_marinus
ENSPCIG00000028092	-	99	84.857	ENSPLAG00000004074	-	91	84.857	Poecilia_latipinna
ENSPCIG00000028092	-	97	86.040	ENSPLAG00000011449	pcbp3	87	86.040	Poecilia_latipinna
ENSPCIG00000028092	-	95	95.137	ENSPMEG00000021239	pcbp3	93	95.137	Poecilia_mexicana
ENSPCIG00000028092	-	100	85.393	ENSPMEG00000006653	-	100	85.674	Poecilia_mexicana
ENSPCIG00000028092	-	96	84.475	ENSPREG00000015736	pcbp3	97	85.061	Poecilia_reticulata
ENSPCIG00000028092	-	94	94.340	ENSPREG00000020585	-	95	94.340	Poecilia_reticulata
ENSPCIG00000028092	-	96	87.097	ENSPNYG00000012326	pcbp3	93	86.810	Pundamilia_nyererei
ENSPCIG00000028092	-	99	87.834	ENSPNYG00000013205	-	98	87.834	Pundamilia_nyererei
ENSPCIG00000028092	-	96	94.817	ENSPNAG00000008541	-	93	94.817	Pygocentrus_nattereri
ENSPCIG00000028092	-	99	90.616	ENSPNAG00000015104	pcbp3	99	90.616	Pygocentrus_nattereri
ENSPCIG00000028092	-	99	93.722	ENSRNOG00000001245	Pcbp3	100	92.690	Rattus_norvegicus
ENSPCIG00000028092	-	100	83.422	ENSRBIG00000028177	-	100	83.422	Rhinopithecus_bieti
ENSPCIG00000028092	-	99	94.170	ENSSHAG00000007890	-	100	87.845	Sarcophilus_harrisii
ENSPCIG00000028092	-	95	95.399	ENSSFOG00015010205	pcbp3	98	95.399	Scleropages_formosus
ENSPCIG00000028092	-	98	81.448	ENSSFOG00015007118	-	97	78.006	Scleropages_formosus
ENSPCIG00000028092	-	96	95.719	ENSSFOG00015014706	pcbp3	93	95.719	Scleropages_formosus
ENSPCIG00000028092	-	96	87.558	ENSSMAG00000011929	pcbp3	95	87.117	Scophthalmus_maximus
ENSPCIG00000028092	-	99	90.504	ENSSMAG00000003135	-	98	90.504	Scophthalmus_maximus
ENSPCIG00000028092	-	96	88.685	ENSSDUG00000008502	-	93	88.685	Seriola_dumerili
ENSPCIG00000028092	-	95	92.988	ENSSDUG00000011608	pcbp3	97	92.988	Seriola_dumerili
ENSPCIG00000028092	-	96	91.705	ENSSLDG00000020161	-	93	90.520	Seriola_lalandi_dorsalis
ENSPCIG00000028092	-	95	92.988	ENSSLDG00000008518	pcbp3	97	92.988	Seriola_lalandi_dorsalis
ENSPCIG00000028092	-	93	87.889	ENSSPUG00000013214	-	96	84.906	Sphenodon_punctatus
ENSPCIG00000028092	-	87	96.471	ENSSPAG00000004190	-	100	86.076	Stegastes_partitus
ENSPCIG00000028092	-	96	82.263	ENSSPAG00000023341	-	93	82.263	Stegastes_partitus
ENSPCIG00000028092	-	98	88.235	ENSTGUG00000008158	-	93	93.237	Taeniopygia_guttata
ENSPCIG00000028092	-	99	88.739	ENSTGUG00000003316	-	100	84.530	Taeniopygia_guttata
ENSPCIG00000028092	-	96	89.602	ENSTRUG00000013604	pcbp3	96	89.908	Takifugu_rubripes
ENSPCIG00000028092	-	96	89.711	ENSTRUG00000006280	-	92	89.711	Takifugu_rubripes
ENSPCIG00000028092	-	100	91.713	ENSTTRG00000015075	-	100	91.713	Tursiops_truncatus
ENSPCIG00000028092	-	93	81.361	ENSXETG00000010491	pcbp2	74	81.361	Xenopus_tropicalis
ENSPCIG00000028092	-	99	92.793	ENSXETG00000011483	pcbp1	100	85.083	Xenopus_tropicalis
ENSPCIG00000028092	-	95	95.137	ENSXCOG00000020481	pcbp3	93	95.137	Xiphophorus_couchianus
ENSPCIG00000028092	-	96	91.705	ENSXMAG00000028711	-	98	88.596	Xiphophorus_maculatus
ENSPCIG00000028092	-	96	95.441	ENSXMAG00000008175	pcbp3	93	95.441	Xiphophorus_maculatus