EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPCIG00000028183 (Gene tree)
Gene ID: 110214885
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Minus strand
Length: 106398 bases
Position: chrFUWB01003899.1:27295-133692
Accession: 19304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000038306	RRM_1	PF00076.22	3.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000047144	SCAF4-201	3441	-	ENSPCIP00000038306	1146 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000028183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000028183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000028183	SCAF4	91	83.498	ENSG00000156304	SCAF4	99	84.664	Homo_sapiens
ENSPCIG00000028183	SCAF4	60	64.929	ENSAPOG00000019615	scaf4b	62	61.735	Acanthochromis_polyacanthus
ENSPCIG00000028183	SCAF4	91	77.596	ENSAPLG00000002509	SCAF4	63	85.547	Anas_platyrhynchos
ENSPCIG00000028183	SCAF4	91	64.801	ENSACAG00000002569	SCAF4	55	79.724	Anolis_carolinensis
ENSPCIG00000028183	SCAF4	91	81.810	ENSANAG00000037494	SCAF4	61	87.374	Aotus_nancymaae
ENSPCIG00000028183	SCAF4	51	57.252	ENSACLG00000024833	scaf4b	54	74.051	Astatotilapia_calliptera
ENSPCIG00000028183	SCAF4	85	52.982	ENSAMXG00000008585	scaf4a	59	64.809	Astyanax_mexicanus
ENSPCIG00000028183	SCAF4	91	81.746	ENSBTAG00000018855	SCAF4	61	87.088	Bos_taurus
ENSPCIG00000028183	SCAF4	91	81.651	ENSCJAG00000008993	SCAF4	83	87.500	Callithrix_jacchus
ENSPCIG00000028183	SCAF4	91	83.378	ENSCAFG00000008863	SCAF4	61	87.879	Canis_familiaris
ENSPCIG00000028183	SCAF4	91	81.429	ENSCAFG00020026019	SCAF4	69	95.477	Canis_lupus_dingo
ENSPCIG00000028183	SCAF4	91	81.586	ENSCHIG00000008385	SCAF4	61	86.591	Capra_hircus
ENSPCIG00000028183	SCAF4	91	81.810	ENSCPOG00000012443	SCAF4	99	82.165	Cavia_porcellus
ENSPCIG00000028183	SCAF4	91	82.115	ENSCCAG00000033727	SCAF4	61	87.356	Cebus_capucinus
ENSPCIG00000028183	SCAF4	91	82.570	ENSCATG00000030379	SCAF4	60	88.660	Cercocebus_atys
ENSPCIG00000028183	SCAF4	91	79.443	ENSCLAG00000006298	SCAF4	61	83.807	Chinchilla_lanigera
ENSPCIG00000028183	SCAF4	91	81.507	ENSCSAG00000009438	SCAF4	61	86.676	Chlorocebus_sabaeus
ENSPCIG00000028183	SCAF4	91	82.042	ENSCANG00000029847	SCAF4	61	87.374	Colobus_angolensis_palliatus
ENSPCIG00000028183	SCAF4	91	73.837	ENSCGRG00001020821	Scaf4	63	74.510	Cricetulus_griseus_chok1gshd
ENSPCIG00000028183	SCAF4	91	73.667	ENSCGRG00000014360	Scaf4	63	72.011	Cricetulus_griseus_crigri
ENSPCIG00000028183	SCAF4	91	79.027	ENSDNOG00000019014	SCAF4	57	81.466	Dasypus_novemcinctus
ENSPCIG00000028183	SCAF4	88	70.119	ENSETEG00000000583	SCAF4	64	69.571	Echinops_telfairi
ENSPCIG00000028183	SCAF4	91	82.582	ENSEASG00005007756	SCAF4	61	87.626	Equus_asinus_asinus
ENSPCIG00000028183	SCAF4	91	82.509	ENSECAG00000014248	SCAF4	61	87.626	Equus_caballus
ENSPCIG00000028183	SCAF4	91	82.789	ENSFCAG00000002228	SCAF4	61	87.161	Felis_catus
ENSPCIG00000028183	SCAF4	91	77.941	ENSFDAG00000017780	SCAF4	62	80.919	Fukomys_damarensis
ENSPCIG00000028183	SCAF4	56	58.113	ENSFHEG00000007634	scaf4b	53	70.886	Fundulus_heteroclitus
ENSPCIG00000028183	SCAF4	91	79.667	ENSGALG00000033965	SCAF4	63	85.693	Gallus_gallus
ENSPCIG00000028183	SCAF4	64	51.842	ENSGACG00000020580	scaf4a	57	60.185	Gasterosteus_aculeatus
ENSPCIG00000028183	SCAF4	61	82.079	ENSGGOG00000015557	SCAF4	65	86.677	Gorilla_gorilla
ENSPCIG00000028183	SCAF4	91	80.315	ENSHGLG00000010582	SCAF4	62	84.366	Heterocephalus_glaber_female
ENSPCIG00000028183	SCAF4	91	80.228	ENSHGLG00100009441	SCAF4	62	84.255	Heterocephalus_glaber_male
ENSPCIG00000028183	SCAF4	91	76.127	ENSSTOG00000004450	SCAF4	59	76.614	Ictidomys_tridecemlineatus
ENSPCIG00000028183	SCAF4	91	78.971	ENSJJAG00000019447	Scaf4	99	76.102	Jaculus_jaculus
ENSPCIG00000028183	SCAF4	58	56.929	ENSKMAG00000005742	scaf4b	53	73.418	Kryptolebias_marmoratus
ENSPCIG00000028183	SCAF4	88	61.685	ENSLACG00000013913	SCAF4	60	71.163	Latimeria_chalumnae
ENSPCIG00000028183	SCAF4	87	59.553	ENSLOCG00000009162	scaf4a	58	69.436	Lepisosteus_oculatus
ENSPCIG00000028183	SCAF4	91	85.424	ENSLAFG00000010710	SCAF4	58	94.576	Loxodonta_africana
ENSPCIG00000028183	SCAF4	91	82.363	ENSMFAG00000037668	SCAF4	60	88.660	Macaca_fascicularis
ENSPCIG00000028183	SCAF4	91	81.310	ENSMMUG00000001712	SCAF4	60	87.231	Macaca_mulatta
ENSPCIG00000028183	SCAF4	91	82.290	ENSMNEG00000032966	SCAF4	60	88.807	Macaca_nemestrina
ENSPCIG00000028183	SCAF4	91	81.349	ENSMLEG00000039674	SCAF4	61	87.069	Mandrillus_leucophaeus
ENSPCIG00000028183	SCAF4	91	78.506	ENSMGAG00000014515	SCAF4	63	85.401	Meleagris_gallopavo
ENSPCIG00000028183	SCAF4	91	79.663	ENSMAUG00000013307	Scaf4	61	84.127	Mesocricetus_auratus
ENSPCIG00000028183	SCAF4	91	83.662	ENSMICG00000005256	SCAF4	61	88.774	Microcebus_murinus
ENSPCIG00000028183	SCAF4	91	77.621	ENSMOCG00000012087	Scaf4	58	89.697	Microtus_ochrogaster
ENSPCIG00000028183	SCAF4	91	95.145	ENSMODG00000021040	SCAF4	99	95.145	Monodelphis_domestica
ENSPCIG00000028183	SCAF4	91	79.151	MGP_CAROLIEiJ_G0020944	Scaf4	84	82.334	Mus_caroli
ENSPCIG00000028183	SCAF4	91	79.560	ENSMUSG00000022983	Scaf4	94	80.481	Mus_musculus
ENSPCIG00000028183	SCAF4	91	72.869	MGP_PahariEiJ_G0016649	Scaf4	85	80.499	Mus_pahari
ENSPCIG00000028183	SCAF4	91	79.355	MGP_SPRETEiJ_G0021850	Scaf4	85	82.753	Mus_spretus
ENSPCIG00000028183	SCAF4	91	82.121	ENSMPUG00000001078	SCAF4	61	87.249	Mustela_putorius_furo
ENSPCIG00000028183	SCAF4	88	69.877	ENSMLUG00000011472	SCAF4	63	76.788	Myotis_lucifugus
ENSPCIG00000028183	SCAF4	91	80.194	ENSNGAG00000005214	Scaf4	61	85.143	Nannospalax_galili
ENSPCIG00000028183	SCAF4	91	81.794	ENSNLEG00000003569	SCAF4	61	86.944	Nomascus_leucogenys
ENSPCIG00000028183	SCAF4	80	73.770	ENSOPRG00000007016	SCAF4	75	85.714	Ochotona_princeps
ENSPCIG00000028183	SCAF4	67	80.435	ENSODEG00000002718	SCAF4	61	81.894	Octodon_degus
ENSPCIG00000028183	SCAF4	53	61.742	ENSONIG00000004687	scaf4a	56	53.281	Oreochromis_niloticus
ENSPCIG00000028183	SCAF4	91	82.547	ENSOCUG00000008336	SCAF4	99	83.526	Oryctolagus_cuniculus
ENSPCIG00000028183	SCAF4	51	57.255	ENSORLG00000003420	scaf4b	69	55.906	Oryzias_latipes
ENSPCIG00000028183	SCAF4	91	77.986	ENSOGAG00000014653	SCAF4	57	91.761	Otolemur_garnettii
ENSPCIG00000028183	SCAF4	54	85.231	ENSOARG00000013894	SCAF4	61	85.957	Ovis_aries
ENSPCIG00000028183	SCAF4	91	81.794	ENSPPAG00000028535	SCAF4	61	87.231	Pan_paniscus
ENSPCIG00000028183	SCAF4	91	82.920	ENSPPRG00000000635	SCAF4	62	87.393	Panthera_pardus
ENSPCIG00000028183	SCAF4	91	81.664	ENSPTIG00000021578	SCAF4	62	88.158	Panthera_tigris_altaica
ENSPCIG00000028183	SCAF4	91	81.794	ENSPTRG00000013848	SCAF4	61	87.231	Pan_troglodytes
ENSPCIG00000028183	SCAF4	91	81.826	ENSPANG00000017332	SCAF4	61	86.944	Papio_anubis
ENSPCIG00000028183	SCAF4	61	64.218	ENSPKIG00000022408	scaf4a	90	66.358	Paramormyrops_kingsleyae
ENSPCIG00000028183	SCAF4	91	78.631	ENSPSIG00000014242	SCAF4	58	88.942	Pelodiscus_sinensis
ENSPCIG00000028183	SCAF4	73	42.711	ENSPLAG00000004403	-	52	70.253	Poecilia_latipinna
ENSPCIG00000028183	SCAF4	68	52.381	ENSPMEG00000006666	-	59	60.476	Poecilia_mexicana
ENSPCIG00000028183	SCAF4	68	51.645	ENSPREG00000013510	scaf4b	52	70.886	Poecilia_reticulata
ENSPCIG00000028183	SCAF4	91	81.634	ENSPPYG00000011355	SCAF4	61	87.088	Pongo_abelii
ENSPCIG00000028183	SCAF4	87	89.299	ENSPCAG00000009998	SCAF4	92	80.714	Procavia_capensis
ENSPCIG00000028183	SCAF4	91	83.318	ENSPCOG00000018710	SCAF4	99	83.532	Propithecus_coquereli
ENSPCIG00000028183	SCAF4	91	83.319	ENSPVAG00000005220	SCAF4	63	87.101	Pteropus_vampyrus
ENSPCIG00000028183	SCAF4	51	57.252	ENSPNYG00000010526	scaf4b	54	74.051	Pundamilia_nyererei
ENSPCIG00000028183	SCAF4	70	60.848	ENSPNAG00000016892	scaf4a	59	66.406	Pygocentrus_nattereri
ENSPCIG00000028183	SCAF4	90	78.255	ENSRNOG00000002104	Scaf4	84	82.243	Rattus_norvegicus
ENSPCIG00000028183	SCAF4	91	82.379	ENSRROG00000029488	SCAF4	61	87.231	Rhinopithecus_roxellana
ENSPCIG00000028183	SCAF4	91	97.007	ENSSHAG00000001581	SCAF4	99	97.007	Sarcophilus_harrisii
ENSPCIG00000028183	SCAF4	80	48.614	ENSSFOG00015006338	scaf4a	54	59.583	Scleropages_formosus
ENSPCIG00000028183	SCAF4	66	53.822	ENSSMAG00000003738	scaf4b	58	71.519	Scophthalmus_maximus
ENSPCIG00000028183	SCAF4	74	53.991	ENSSMAG00000017901	scaf4a	52	54.348	Scophthalmus_maximus
ENSPCIG00000028183	SCAF4	91	79.895	ENSSARG00000009994	SCAF4	60	86.397	Sorex_araneus
ENSPCIG00000028183	SCAF4	91	83.452	ENSSSCG00000021023	SCAF4	99	83.986	Sus_scrofa
ENSPCIG00000028183	SCAF4	69	69.989	ENSTGUG00000013464	SCAF4	61	85.755	Taeniopygia_guttata
ENSPCIG00000028183	SCAF4	86	47.113	ENSTNIG00000009945	scaf4a	52	70.414	Tetraodon_nigroviridis
ENSPCIG00000028183	SCAF4	91	82.165	ENSTTRG00000010963	SCAF4	62	87.446	Tursiops_truncatus
ENSPCIG00000028183	SCAF4	91	84.783	ENSUAMG00000008860	SCAF4	99	85.960	Ursus_americanus
ENSPCIG00000028183	SCAF4	91	84.913	ENSUMAG00000016962	SCAF4	62	89.270	Ursus_maritimus
ENSPCIG00000028183	SCAF4	91	83.393	ENSVVUG00000002953	SCAF4	61	87.936	Vulpes_vulpes