EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPCIG00000028310 (Gene tree)
Gene ID: 110200066
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Phascolarctos_cinereus
Status: putative
Strand: Plus strand
Length: 151691 bases
Position: chrFUWB01000110.1:1503951-1655641
Accession: 110200066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPCIP00000038511	ResIII	PF04851.15	5.5e-07	1	1
ENSPCIP00000038500	ResIII	PF04851.15	5.7e-07	1	1
ENSPCIP00000038513	ResIII	PF04851.15	5.7e-07	1	1
ENSPCIP00000038492	ResIII	PF04851.15	5.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPCIT00000047393	CHD5-204	5958	-	ENSPCIP00000038511	1924 (aa)	-	-
ENSPCIT00000047374	CHD5-201	6237	-	ENSPCIP00000038492	2017 (aa)	-	-
ENSPCIT00000047388	CHD5-203	6036	-	ENSPCIP00000038506	1950 (aa)	-	-
ENSPCIT00000047395	CHD5-205	6172	XM_020975203	ENSPCIP00000038513	1980 (aa)	XP_020830862	-
ENSPCIT00000047382	CHD5-202	6108	-	ENSPCIP00000038500	1974 (aa)	-	-

Gene Model

Click here to download ENSPCIG00000028310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPCIG00000028310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPCIG00000028310	CHD5	90	72.586	ENSPCIG00000001846	-	99	74.152
ENSPCIG00000028310	CHD5	97	72.774	ENSPCIG00000005442	CHD3	93	84.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPCIG00000028310	CHD5	100	90.222	ENSG00000116254	CHD5	99	91.938	Homo_sapiens
ENSPCIG00000028310	CHD5	97	90.900	ENSAMEG00000009880	CHD5	99	90.848	Ailuropoda_melanoleuca
ENSPCIG00000028310	CHD5	92	79.203	ENSACIG00000012582	chd5	99	78.947	Amphilophus_citrinellus
ENSPCIG00000028310	CHD5	92	79.320	ENSAOCG00000020356	chd5	97	77.482	Amphiprion_ocellaris
ENSPCIG00000028310	CHD5	93	81.680	ENSAPLG00000015475	CHD5	99	83.059	Anas_platyrhynchos
ENSPCIG00000028310	CHD5	98	84.162	ENSACAG00000002441	CHD5	99	84.151	Anolis_carolinensis
ENSPCIG00000028310	CHD5	88	92.163	ENSANAG00000001078	CHD5	91	92.280	Aotus_nancymaae
ENSPCIG00000028310	CHD5	91	75.783	ENSACLG00000003012	chd5	96	75.662	Astatotilapia_calliptera
ENSPCIG00000028310	CHD5	90	75.568	ENSAMXG00000008921	chd5	97	82.628	Astyanax_mexicanus
ENSPCIG00000028310	CHD5	92	92.763	ENSBTAG00000040477	CHD5	100	92.873	Bos_taurus
ENSPCIG00000028310	CHD5	100	90.020	ENSCJAG00000000101	CHD5	99	91.680	Callithrix_jacchus
ENSPCIG00000028310	CHD5	92	92.649	ENSCAFG00000019545	CHD5	100	92.540	Canis_familiaris
ENSPCIG00000028310	CHD5	99	90.262	ENSCAFG00020008689	CHD5	96	92.173	Canis_lupus_dingo
ENSPCIG00000028310	CHD5	99	89.506	ENSCHIG00000015027	CHD5	97	90.787	Capra_hircus
ENSPCIG00000028310	CHD5	97	87.108	ENSTSYG00000033991	CHD5	99	87.404	Carlito_syrichta
ENSPCIG00000028310	CHD5	97	90.900	ENSCAPG00000009294	CHD5	100	91.313	Cavia_aperea
ENSPCIG00000028310	CHD5	97	90.848	ENSCPOG00000025080	CHD5	100	91.262	Cavia_porcellus
ENSPCIG00000028310	CHD5	100	90.121	ENSCCAG00000024756	CHD5	99	91.783	Cebus_capucinus
ENSPCIG00000028310	CHD5	100	89.516	ENSCATG00000043011	CHD5	99	91.163	Cercocebus_atys
ENSPCIG00000028310	CHD5	98	91.163	ENSCLAG00000010589	CHD5	99	92.112	Chinchilla_lanigera
ENSPCIG00000028310	CHD5	100	90.373	ENSCSAG00000000733	CHD5	99	92.041	Chlorocebus_sabaeus
ENSPCIG00000028310	CHD5	92	91.827	ENSCPBG00000019363	CHD5	100	91.827	Chrysemys_picta_bellii
ENSPCIG00000028310	CHD5	98	91.835	ENSCANG00000032302	CHD5	99	91.990	Colobus_angolensis_palliatus
ENSPCIG00000028310	CHD5	55	93.302	ENSCGRG00001011042	Chd5	100	93.396	Cricetulus_griseus_chok1gshd
ENSPCIG00000028310	CHD5	98	90.233	ENSCGRG00000011341	Chd5	99	91.001	Cricetulus_griseus_crigri
ENSPCIG00000028310	CHD5	94	78.138	ENSDARG00000105083	chd5	100	79.785	Danio_rerio
ENSPCIG00000028310	CHD5	93	66.649	ENSDARG00000025789	chd4b	99	65.929	Danio_rerio
ENSPCIG00000028310	CHD5	100	86.146	ENSDNOG00000046342	CHD5	99	87.397	Dasypus_novemcinctus
ENSPCIG00000028310	CHD5	97	90.956	ENSDORG00000005923	Chd5	100	90.801	Dipodomys_ordii
ENSPCIG00000028310	CHD5	99	88.900	ENSEASG00005021464	CHD5	99	97.500	Equus_asinus_asinus
ENSPCIG00000028310	CHD5	99	88.648	ENSECAG00000025043	CHD5	98	96.016	Equus_caballus
ENSPCIG00000028310	CHD5	75	97.674	ENSEEUG00000002772	CHD5	77	97.674	Erinaceus_europaeus
ENSPCIG00000028310	CHD5	91	76.804	ENSELUG00000010742	chd5	90	91.628	Esox_lucius
ENSPCIG00000028310	CHD5	100	89.516	ENSFCAG00000006319	CHD5	99	91.313	Felis_catus
ENSPCIG00000028310	CHD5	98	89.737	ENSFALG00000009740	CHD5	99	89.737	Ficedula_albicollis
ENSPCIG00000028310	CHD5	97	90.848	ENSFDAG00000012881	CHD5	97	90.761	Fukomys_damarensis
ENSPCIG00000028310	CHD5	100	87.998	ENSGALG00000000747	CHD5	99	89.969	Gallus_gallus
ENSPCIG00000028310	CHD5	56	82.251	ENSGACG00000004389	chd5	99	80.759	Gasterosteus_aculeatus
ENSPCIG00000028310	CHD5	87	97.297	ENSGAGG00000001590	CHD5	99	96.098	Gopherus_agassizii
ENSPCIG00000028310	CHD5	97	91.727	ENSGGOG00000000708	CHD5	100	91.882	Gorilla_gorilla
ENSPCIG00000028310	CHD5	92	75.851	ENSHBUG00000013453	chd5	96	76.471	Haplochromis_burtoni
ENSPCIG00000028310	CHD5	100	89.214	ENSHGLG00000018184	CHD5	99	91.755	Heterocephalus_glaber_female
ENSPCIG00000028310	CHD5	98	84.845	ENSHGLG00100013261	CHD5	99	84.288	Heterocephalus_glaber_male
ENSPCIG00000028310	CHD5	92	78.649	ENSIPUG00000005446	chd5	99	78.389	Ictalurus_punctatus
ENSPCIG00000028310	CHD5	98	91.628	ENSSTOG00000002778	CHD5	99	92.536	Ictidomys_tridecemlineatus
ENSPCIG00000028310	CHD5	100	89.264	ENSJJAG00000019072	Chd5	99	91.376	Jaculus_jaculus
ENSPCIG00000028310	CHD5	95	82.597	ENSLOCG00000004944	chd5	99	81.549	Lepisosteus_oculatus
ENSPCIG00000028310	CHD5	97	92.292	ENSLAFG00000006348	CHD5	99	92.654	Loxodonta_africana
ENSPCIG00000028310	CHD5	98	91.835	ENSMFAG00000033993	CHD5	100	92.704	Macaca_fascicularis
ENSPCIG00000028310	CHD5	98	91.568	ENSMMUG00000016838	CHD5	99	92.239	Macaca_mulatta
ENSPCIG00000028310	CHD5	100	90.373	ENSMNEG00000040044	CHD5	99	92.041	Macaca_nemestrina
ENSPCIG00000028310	CHD5	97	88.776	ENSMLEG00000039166	CHD5	100	88.878	Mandrillus_leucophaeus
ENSPCIG00000028310	CHD5	91	75.670	ENSMZEG00005000841	chd5	91	81.597	Maylandia_zebra
ENSPCIG00000028310	CHD5	97	89.297	ENSMGAG00000001055	CHD5	99	89.710	Meleagris_gallopavo
ENSPCIG00000028310	CHD5	100	87.298	ENSMICG00000017862	CHD5	99	89.545	Microcebus_murinus
ENSPCIG00000028310	CHD5	100	89.214	ENSMOCG00000011049	Chd5	99	91.323	Microtus_ochrogaster
ENSPCIG00000028310	CHD5	92	85.301	ENSMODG00000006294	CHD5	94	85.301	Monodelphis_domestica
ENSPCIG00000028310	CHD5	92	78.644	ENSMALG00000002831	chd5	96	78.312	Monopterus_albus
ENSPCIG00000028310	CHD5	100	89.214	MGP_CAROLIEiJ_G0026857	Chd5	99	90.543	Mus_caroli
ENSPCIG00000028310	CHD5	100	88.978	ENSMUSG00000005045	Chd5	99	90.808	Mus_musculus
ENSPCIG00000028310	CHD5	100	89.163	MGP_PahariEiJ_G0029205	Chd5	99	91.058	Mus_pahari
ENSPCIG00000028310	CHD5	100	89.163	MGP_SPRETEiJ_G0027850	Chd5	99	91.111	Mus_spretus
ENSPCIG00000028310	CHD5	98	88.521	ENSMPUG00000007122	CHD5	99	87.750	Mustela_putorius_furo
ENSPCIG00000028310	CHD5	97	89.757	ENSNGAG00000019812	Chd5	97	89.466	Nannospalax_galili
ENSPCIG00000028310	CHD5	98	89.152	ENSNLEG00000010320	CHD5	100	89.400	Nomascus_leucogenys
ENSPCIG00000028310	CHD5	85	85.115	ENSOPRG00000004304	CHD5	87	84.470	Ochotona_princeps
ENSPCIG00000028310	CHD5	97	90.848	ENSODEG00000010262	CHD5	100	91.262	Octodon_degus
ENSPCIG00000028310	CHD5	92	77.944	ENSONIG00000000619	chd5	85	92.547	Oreochromis_niloticus
ENSPCIG00000028310	CHD5	95	73.009	ENSOANG00000001819	CHD5	100	72.958	Ornithorhynchus_anatinus
ENSPCIG00000028310	CHD5	99	88.553	ENSOGAG00000005703	CHD5	99	90.331	Otolemur_garnettii
ENSPCIG00000028310	CHD5	96	90.943	ENSOARG00000013425	CHD5	98	91.048	Ovis_aries
ENSPCIG00000028310	CHD5	97	91.628	ENSPPAG00000034048	CHD5	100	91.783	Pan_paniscus
ENSPCIG00000028310	CHD5	100	88.911	ENSPPRG00000009453	CHD5	99	90.693	Panthera_pardus
ENSPCIG00000028310	CHD5	96	85.884	ENSPTIG00000013926	CHD5	99	84.635	Panthera_tigris_altaica
ENSPCIG00000028310	CHD5	100	90.076	ENSPTRG00000000075	CHD5	99	91.787	Pan_troglodytes
ENSPCIG00000028310	CHD5	100	90.474	ENSPANG00000006765	CHD5	99	92.145	Papio_anubis
ENSPCIG00000028310	CHD5	93	77.030	ENSPKIG00000004282	chd5	93	92.093	Paramormyrops_kingsleyae
ENSPCIG00000028310	CHD5	94	84.196	ENSPSIG00000006414	CHD5	99	84.546	Pelodiscus_sinensis
ENSPCIG00000028310	CHD5	70	91.785	ENSPEMG00000014799	Chd5	100	92.824	Peromyscus_maniculatus_bairdii
ENSPCIG00000028310	CHD5	88	85.897	ENSPLAG00000005343	chd5	96	77.171	Poecilia_latipinna
ENSPCIG00000028310	CHD5	97	87.688	ENSPPYG00000001952	CHD5	100	89.349	Pongo_abelii
ENSPCIG00000028310	CHD5	100	90.474	ENSPCOG00000022930	CHD5	99	92.455	Propithecus_coquereli
ENSPCIG00000028310	CHD5	92	77.904	ENSPNYG00000003183	chd5	99	77.505	Pundamilia_nyererei
ENSPCIG00000028310	CHD5	100	88.861	ENSRNOG00000011268	Chd5	99	90.491	Rattus_norvegicus
ENSPCIG00000028310	CHD5	98	88.310	ENSRBIG00000032140	CHD5	95	94.169	Rhinopithecus_bieti
ENSPCIG00000028310	CHD5	97	91.675	ENSRROG00000041146	CHD5	99	91.830	Rhinopithecus_roxellana
ENSPCIG00000028310	CHD5	98	87.926	ENSSBOG00000001955	CHD5	99	92.230	Saimiri_boliviensis_boliviensis
ENSPCIG00000028310	CHD5	95	92.275	ENSSHAG00000018641	CHD5	99	92.275	Sarcophilus_harrisii
ENSPCIG00000028310	CHD5	96	78.181	ENSSFOG00015006296	chd5	97	78.176	Scleropages_formosus
ENSPCIG00000028310	CHD5	85	85.417	ENSSDUG00000017526	chd5	93	91.163	Seriola_dumerili
ENSPCIG00000028310	CHD5	96	81.037	ENSSPUG00000010622	CHD5	97	82.937	Sphenodon_punctatus
ENSPCIG00000028310	CHD5	98	89.825	ENSSSCG00000003366	CHD5	100	92.595	Sus_scrofa
ENSPCIG00000028310	CHD5	92	84.112	ENSTGUG00000002634	-	100	86.213	Taeniopygia_guttata
ENSPCIG00000028310	CHD5	53	80.569	ENSTNIG00000004346	chd5	99	81.041	Tetraodon_nigroviridis
ENSPCIG00000028310	CHD5	100	87.702	ENSTTRG00000010468	CHD5	99	90.789	Tursiops_truncatus
ENSPCIG00000028310	CHD5	97	91.914	ENSUAMG00000024509	CHD5	98	91.832	Ursus_americanus
ENSPCIG00000028310	CHD5	97	87.311	ENSUMAG00000024173	CHD5	99	87.433	Ursus_maritimus
ENSPCIG00000028310	CHD5	98	90.454	ENSVVUG00000026480	CHD5	96	96.341	Vulpes_vulpes
ENSPCIG00000028310	CHD5	95	79.341	ENSXETG00000002904	chd5	100	80.308	Xenopus_tropicalis
ENSPCIG00000028310	CHD5	57	83.871	ENSXCOG00000014202	chd5	95	83.871	Xiphophorus_couchianus